SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000241258
Gene: CRCP Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:66114604-66154568 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103600178 chr7:66044507-66186892 Sample_02_1036 Mammary gland HCC70_XY018 178 81 3918 484 11 104 2414 ASL,CRCP,TPST1
SE_02_110700089 chr7:66071237-66168042 Sample_02_1107 Brain SK-N-AS 89 30 2672 345 9 98 2414 ASL,CRCP,TPST1
SE_02_110900113 chr7:66075868-66167962 Sample_02_1109 Brain SK-N-FI 113 27 2523 329 8 93 2313 ASL,CRCP,TPST1
SE_02_110500276 chr7:66077433-66154421 Sample_02_1105 Brain NBL-S 276 30 2142 276 7 89 2183 ASL,CRCP
SE_02_104601767 chr7:66077832-66112936 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1767 13 980 124 1 53 1476 ASL,CRCP
SE_02_104700737 chr7:66078083-66154047 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 737 21 2115 271 6 87 2149 ASL,CRCP
SE_02_133400272 chr7:66082856-66111469 Sample_02_1334 Lung NCI-H1299_mutSMARCA4 272 9 801 111 1 41 1228 ASL,CRCP
SE_02_101701742 chr7:66086548-66155196 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1742 15 1918 255 7 75 1729 ASL,CRCP
SE_02_088601822 chr7:66086693-66112341 Sample_02_0886 Skin foreskin_ p63KLF4 1822 6 732 99 1 38 953 ASL,CRCP
SE_02_021601398 chr7:66087343-66111558 Sample_02_0216 Skin NHEK_scramble 1398 3 682 95 1 31 816 ASL,CRCP
SE_02_103200692 chr7:66090825-66112056 Sample_02_1032 Head and neck SCC1 JQ1 692 9 601 88 0 16 347 ASL,CRCP
SE_02_080800481 chr7:66095822-66157230 Sample_02_0808 Ovary RMG1_ARID1A KO 481 37 1701 228 6 39 737 CRCP,ASL,TPST1
SE_02_076500232 chr7:66096896-66126547 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 232 9 787 109 2 17 104 CRCP,ASL
SE_02_098901226 chr7:66097468-66154812 Sample_02_0989 Kidney kidney cortex_WT 1226 21 1589 213 6 39 737 CRCP,ASL
SE_02_058400317 chr7:66098182-66122784 Sample_02_0584 Lung H1299 WT 317 9 646 91 2 16 104 CRCP,ASL,TPST1,AC068533.7
SE_04_000100309 chr7:66098257-66119429 Sample_04_0001 Blood heat shocked K562 309 4 544 75 1 3 104 CRCP,ASL,GUSB,AC068533.7
SE_02_094600123 chr7:66098605-66112525 Sample_02_0946 Tongue HN12 123 4 371 51 0 3 0 ASL,CRCP
SE_02_102500971 chr7:66099071-66112847 Sample_02_1025 Esophagus KYSE150 971 6 374 50 0 3 0 ASL,CRCP
SE_02_154100591 chr7:66099278-66119162 Sample_02_1541 Nasopharyngeal HNE1 591 9 518 67 1 3 104 CRCP,ASL
SE_01_008200397 chr7:66099285-66164203 Sample_01_0082 Right lobe of liver right-lobe-of-liver 397 7 1776 241 6 39 737 CRCP,ASL,TPST1
SE_02_029700179 chr7:66099383-66168482 Sample_02_0297 Neuroblastoma CLB-CAR 179 9 1876 253 6 39 737 CRCP,ASL,TPST1
SE_04_000200720 chr7:66099394-66116890 Sample_04_0002 Blood cold shocked K562 720 3 461 60 1 3 104 CRCP,ASL,GUSB,AC068533.7
SE_02_031400262 chr7:66099394-66168462 Sample_02_0314 Neuroblastoma SK-N-FI 262 9 1876 252 6 39 737 CRCP,ASL,TPST1
SE_02_064200596 chr7:66099458-66112114 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 596 7 355 47 0 3 0 ASL,CRCP
SE_02_031900090 chr7:66099458-66158038 Sample_02_0319 Neuroblastoma NB-EBc1 90 8 1619 214 6 39 737 CRCP,ASL,TPST1
SE_02_042200163 chr7:66099495-66153267 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 163 6 1499 195 5 39 552 CRCP,ASL
SE_02_064300500 chr7:66099496-66111900 Sample_02_0643 Mammary gland MDA-MB-436 500 6 345 46 0 3 0 ASL,CRCP
SE_02_049901218 chr7:66099535-66125609 Sample_02_0499 Fetal lung IMR90 IR Senescence 1218 15 701 92 2 16 104 CRCP,ASL,AC068533.7
SE_02_076600793 chr7:66099588-66149562 Sample_02_0766 Ovary PEO1 793 18 1390 183 4 33 364 CRCP,ASL
SE_02_151000111 chr7:66099613-66157003 Sample_02_1510 Lung H3122_LR_Pano 111 27 1596 211 6 39 737 CRCP,ASL,TPST1
SE_02_076900574 chr7:66099623-66150850 Sample_02_0769 Ovary HEYA8 574 21 1422 186 4 33 364 CRCP,ASL
SE_02_077000615 chr7:66099631-66153159 Sample_02_0770 Ovary OVCA429_shLuc 615 29 1497 194 5 39 534 CRCP,ASL
SE_02_076700891 chr7:66099632-66119270 Sample_02_0767 Ovary OVCA429 891 11 520 67 1 3 104 CRCP,ASL
SE_02_032700143 chr7:66104626-66171132 Sample_02_0327 Liver hepatocytes_d6 143 7 1800 243 7 43 737 CRCP,ASL,TPST1
SE_02_032600183 chr7:66104772-66164319 Sample_02_0326 Liver hepatocytes_d3 183 7 1629 219 6 39 737 CRCP,ASL,TPST1
SE_02_031000103 chr7:66113463-66152889 Sample_02_0310 Neuroblastoma SJNB8 103 6 1099 144 5 36 495 CRCP,ASL
SE_02_031200451 chr7:66113555-66158938 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 451 4 1264 172 6 36 737 CRCP,ASL,TPST1
SE_02_034000036 chr7:66113712-66157676 Sample_02_0340 Brain BE2C_2 36 6 1223 163 6 36 737 CRCP,ASL,TPST1
SE_02_029800103 chr7:66113774-66158351 Sample_02_0298 Neuroblastoma CLB-GA 103 7 1238 164 6 36 737 CRCP,ASL,TPST1
SE_02_149900108 chr7:66117214-66157820 Sample_02_1499 Brain BE_2_-C 108 21 1144 149 5 36 633 CRCP,ASL,TPST1
SE_02_029600497 chr7:66117544-66153863 Sample_02_0296 Neuroblastoma CLB-BER-Lud 497 5 1037 133 4 36 537 CRCP,ASL
SE_02_030600189 chr7:66118199-66154613 Sample_02_0306 Autonomic ganglia SH-SY5Y 189 3 1040 137 5 36 612 CRCP,ASL
SE_02_030000298 chr7:66118424-66155739 Sample_02_0300 Neuroblastoma CLB-PE 298 4 1063 140 5 36 633 CRCP,ASL,TPST1
SE_02_031100387 chr7:66118532-66158050 Sample_02_0311 Neuroblastoma SK-N-AS 387 4 1115 148 5 36 633 CRCP,ASL,TPST1
SE_02_106300132 chr7:66118557-66157937 Sample_02_1063 Brain CLB-GA-control 132 12 1112 148 5 36 633 CRCP,ASL,TPST1
SE_02_025100260 chr7:66118559-66153867 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 260 7 1009 131 4 36 537 CRCP,ASL
SE_02_007600027 chr7:66118631-66153284 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 27 9 992 129 4 36 449 CRCP,ASL
SE_02_029900367 chr7:66118711-66153724 Sample_02_0299 Neuroblastoma CLB-MA 367 6 1001 130 4 36 511 CRCP,ASL
SE_02_054100237 chr7:66118786-66153522 Sample_02_0541 Brain Kelly_NaiveJQ1 237 10 996 128 4 36 484 CRCP,ASL
SE_02_106400246 chr7:66119246-66152697 Sample_02_1064 Brain CLB-GA-Dinaciclib_8h 246 13 961 126 4 36 365 CRCP,ASL
SE_02_030400400 chr7:66119407-66155293 Sample_02_0304 Neuroblastoma N206 400 4 1028 136 5 36 633 CRCP,ASL,TPST1
SE_02_030700354 chr7:66122219-66153500 Sample_02_0307 Neuroblastoma SJNB12 354 7 895 115 3 31 483 CRCP,ASL
SE_01_011100296 chr7:66122456-66156949 Sample_01_0111 Brain SK-N-SH 296 12 979 131 4 31 633 CRCP,ASL,TPST1
SE_02_031600281 chr7:66123031-66168825 Sample_02_0316 Neuroblastoma CHP212 281 6 1255 169 4 23 633 CRCP,ASL,TPST1
SE_02_030800389 chr7:66123881-66153980 Sample_02_0308 Neuroblastoma SJNB1 389 4 866 110 3 23 559 CRCP,ASL
SE_02_124600375 chr7:66124143-66157706 Sample_02_1246 Brain LAN5_ATRA 375 17 953 123 4 23 633 CRCP,ASL,TPST1
SE_02_150000407 chr7:66124513-66157013 Sample_02_1500 Brain KELLY_untreat 407 14 926 122 4 23 633 CRCP,ASL,TPST1
SE_02_031500424 chr7:66125109-66154410 Sample_02_0315 Neuroblastoma TR14 424 3 841 110 4 23 603 CRCP,ASL
SE_02_103900455 chr7:66136359-66163183 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 455 8 752 108 3 16 434 CRCP,TPST1
SE_00_001400472 chr7:66139481-66154469 Sample_00_0014 Heart left ventricle heart-left-ventricle 472 1 435 57 3 16 409 CRCP
SE_02_137500798 chr7:66139591-66153291 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 798 11 402 51 2 16 253 CRCP
SE_02_154900401 chr7:66139773-66154434 Sample_02_1549 Gastrointestinal Stromal GIST-430B 401 6 424 54 3 16 406 CRCP
SE_02_137601201 chr7:66140041-66153470 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1201 8 393 48 2 16 280 CRCP
SE_02_021100756 chr7:66141222-66153415 Sample_02_0211 Lung MRC-5_NFD_1DPT 756 6 359 45 2 16 276 CRCP
SE_02_141300820 chr7:66141385-66172198 Sample_02_1413 Muscle RH4_sgBRG1 820 11 824 115 4 20 434 CRCP,TPST1
SE_02_021000745 chr7:66142733-66164547 Sample_02_0210 Lung MRC-5_N_1DPT 745 5 585 90 3 16 434 CRCP,TPST1
SE_02_155700571 chr7:66144902-66153038 Sample_02_1557 Gastrointestinal Stromal GIST-6_KIT e11/16 571 5 229 26 1 16 213 CRCP
Genomic distribution of SEs associated with CRCP
Genome Browser

The strength of the tissue affected by the gene

Expression of CRCP

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)