Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000153048
Gene: CARHSP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:8852942-8869012 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700174 chr16:8800682-8968780 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 174 66 6749 525 8 330 4114 CARHSP1,USP7,PMM2,TMEM186
SE_02_143200430 chr16:8805415-8891934 Sample_02_1432 Bone A673 STAG2 WT 430 33 3651 382 3 77 2016 CARHSP1,PMM2,TMEM186,USP7
SE_02_046600340 chr16:8806506-8888388 Sample_02_0466 Adipose visceral adipocytes 340 44 3468 372 3 70 1975 CARHSP1,PMM2,TMEM186,USP7
SE_02_143300345 chr16:8806538-8892503 Sample_02_1433 Bone A673 STAG2 null 345 30 3649 380 3 71 2070 CARHSP1,USP7,PMM2,TMEM186
SE_02_057300404 chr16:8817032-8872107 Sample_02_0573 Blood Nalm6_1 404 13 2509 306 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_125200303 chr16:8818322-8894411 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 303 25 3335 334 1 95 2068 CARHSP1,USP7,PMM2,TMEM186
SE_02_124900444 chr16:8818673-8872402 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 444 20 2485 305 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_074200114 chr16:8818683-8865620 Sample_02_0742 Embryo ESCs_day0 114 10 2245 293 0 38 1265 CARHSP1,PMM2,TMEM186
SE_02_116000115 chr16:8818869-8865264 Sample_02_1160 Embryo H1_shLuc 115 10 2220 290 0 38 1265 CARHSP1,PMM2,TMEM186,USP7
SE_02_138500138 chr16:8821060-8889735 Sample_02_1385 Other iPSCs 138 12 3047 313 1 65 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_101500204 chr16:8821406-8869729 Sample_02_1015 Embryo H9_ Undifferentiated 204 14 2296 286 0 60 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_156700142 chr16:8822402-8869009 Sample_02_1567 iPSCs CiPSC 142 15 2229 279 0 54 1669 CARHSP1,PMM2,TMEM186
SE_02_088600573 chr16:8824718-8895005 Sample_02_0886 Skin foreskin_ p63KLF4 573 20 3161 308 1 98 2171 CARHSP1,USP7,PMM2,TMEM186
SE_02_157000116 chr16:8828135-8878896 Sample_02_1570 iPSCs EiPSC 116 21 2417 273 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_157200069 chr16:8828148-8886392 Sample_02_1572 iPSCs FiPSC 69 20 2693 279 0 65 1741 CARHSP1,PMM2,TMEM186
SE_01_010701324 chr16:8828189-8879297 Sample_01_0107 Esophagus esophagus squamous epithelium 1324 16 2424 272 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_101700963 chr16:8828243-8869778 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 963 15 2075 258 0 60 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_101600422 chr16:8828287-8869786 Sample_02_1016 Embryo H9_Mesendoderm_24h 422 10 2074 258 0 60 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_053000513 chr16:8828366-8885304 Sample_02_0530 Mammary gland MCF10A 513 14 2653 276 0 63 1741 CARHSP1,PMM2,TMEM186
SE_02_117200447 chr16:8829101-8838028 Sample_02_1172 Embryo H9 WT 447 4 466 62 0 0 0 PMM2,TMEM186,CARHSP1
SE_02_055900477 chr16:8829250-8843795 Sample_02_0559 iPSCs FX52 iPSCs dC-T 477 6 695 106 0 0 0 PMM2,TMEM186,CARHSP1
SE_02_104600691 chr16:8829358-8898232 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 691 28 3129 288 1 106 2327 CARHSP1,USP7,PMM2,TMEM186
SE_02_056000515 chr16:8830079-8837719 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 515 4 414 54 0 0 0 PMM2,TMEM186,CARHSP1
SE_02_055800424 chr16:8830254-8850742 Sample_02_0558 iPSCs FX52 iPSCs mock 424 8 995 144 0 7 356 PMM2,TMEM186,CARHSP1
SE_02_073900969 chr16:8830502-8872327 Sample_02_0739 Blood Nalm6 969 8 2083 248 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_067800591 chr16:8830665-8836506 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 591 5 352 45 0 0 0 PMM2,TMEM186,CARHSP1
SE_02_075500954 chr16:8831960-8865224 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 954 9 1771 230 0 38 1265 CARHSP1,PMM2,TMEM186
SE_02_122901311 chr16:8832917-8871603 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1311 9 1955 241 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_075200929 chr16:8832990-8864831 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 929 9 1700 226 0 38 1265 CARHSP1,PMM2,TMEM186
SE_02_089600910 chr16:8834476-8869077 Sample_02_0896 Heart left ventricle_LV1294 910 16 1752 222 0 55 1691 CARHSP1,PMM2,TMEM186
SE_01_010400216 chr16:8834501-8869551 Sample_01_0104 Lung upper lobe of left lung 216 10 1768 223 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_063801007 chr16:8834631-8865053 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 1007 15 1598 215 0 38 1265 CARHSP1,PMM2,TMEM186
SE_02_090001067 chr16:8835270-8869028 Sample_02_0900 Heart left ventricle_LV1452 1067 11 1700 213 0 54 1676 CARHSP1,PMM2,TMEM186
SE_02_075300433 chr16:8836056-8866628 Sample_02_0753 Embryo ES-derived progenitors_FG type 433 6 1572 200 0 38 1265 CARHSP1,PMM2,TMEM186
SE_02_116800496 chr16:8842213-8887720 Sample_02_1168 Biliary H69_TGF Vehicle_2 496 19 2070 182 1 65 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_061600178 chr16:8842244-8888863 Sample_02_0616 Liposarcoma liposarcoma cells_LP6 178 21 2108 184 1 65 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_113100665 chr16:8842337-8880365 Sample_02_1131 Pancreas T3M4 wt 665 11 1796 173 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_143701192 chr16:8844333-8888345 Sample_02_1437 Liver LSEC-TNF 1192 15 1987 164 1 65 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_047900537 chr16:8845484-8886483 Sample_02_0479 Head and neck SCC25 537 17 1857 151 0 65 1741 CARHSP1,PMM2,TMEM186
SE_02_143801089 chr16:8845870-8889175 Sample_02_1438 Liver LSEC 1089 14 1933 154 1 65 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_144500951 chr16:8845919-8871944 Sample_02_1445 Adipose SW872_TAZ4SA 951 8 1299 132 0 60 1741 CARHSP1,PMM2,TMEM186
SE_02_128000544 chr16:8846758-8886501 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 544 8 1801 141 0 65 1741 CARHSP1,PMM2,TMEM186
SE_02_092200820 chr16:8846826-8869092 Sample_02_0922 Heart fetal heart_PCW10_12434 820 4 1159 118 0 58 1702 CARHSP1,PMM2,TMEM186
SE_02_103500212 chr16:8846949-8927314 Sample_02_1035 Mammary gland HCC70_Vehicle 212 32 3381 202 3 250 3226 CARHSP1,USP7,PMM2,TMEM186
SE_02_111100979 chr16:8847028-8888464 Sample_02_1111 Other HGrC1_SMAD2/3KO 979 25 1853 143 1 65 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_143601043 chr16:8847361-8888823 Sample_02_1436 Liver LSEC-Ctrl 1043 16 1860 142 1 63 1741 CARHSP1,PMM2,TMEM186,USP7
SE_02_032500899 chr16:8847396-8872881 Sample_02_0325 Liver hepatocytes_d1 899 5 1270 123 0 58 1741 CARHSP1,PMM2,TMEM186
SE_02_032700473 chr16:8847464-8872984 Sample_02_0327 Liver hepatocytes_d6 473 5 1274 122 0 58 1741 CARHSP1,PMM2,TMEM186
SE_01_009000437 chr16:8847489-8869506 Sample_01_0090 Lung upper-lobe-of-left-lung 437 1 1147 114 0 58 1741 CARHSP1,PMM2,TMEM186
SE_02_039600503 chr16:8847622-8904536 Sample_02_0396 Skin NHEK-D 503 21 2462 163 1 160 2727 CARHSP1,USP7,PMM2,TMEM186
SE_02_061500876 chr16:8847632-8886676 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 876 14 1780 136 0 62 1729 CARHSP1,PMM2,TMEM186
SE_02_132100389 chr16:8847674-8888231 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 389 9 1832 139 1 62 1719 CARHSP1,PMM2,USP7
SE_02_114500549 chr16:8847743-8889472 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 549 11 1871 141 1 61 1711 CARHSP1,PMM2,USP7
SE_02_046501082 chr16:8847757-8886437 Sample_02_0465 Adipose subcutaneous adipocytes 1082 14 1761 136 0 60 1706 CARHSP1,PMM2
SE_02_116900888 chr16:8848193-8889554 Sample_02_1169 Biliary H69_TGF beta_16h_2 888 19 1849 138 1 59 1623 CARHSP1,PMM2,USP7
SE_01_006900505 chr16:8848194-8892799 Sample_01_0069 Adrenal gland adrenal-gland 505 8 1994 144 1 61 1754 CARHSP1,USP7,PMM2
SE_02_048000534 chr16:8848212-8884747 Sample_02_0480 Gingival epithelial HGEP 534 12 1666 130 0 55 1621 CARHSP1,PMM2
SE_02_158400595 chr16:8848242-8889286 Sample_02_1584 Brain U87 GBM_Mock 595 11 1832 137 1 58 1612 CARHSP1,PMM2,USP7
SE_02_132000891 chr16:8848254-8857255 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 891 3 504 59 0 12 695 CARHSP1,PMM2
SE_02_116600828 chr16:8848265-8889479 Sample_02_1166 Biliary H69_TGF beta_16h_1 828 16 1838 137 1 58 1610 CARHSP1,PMM2,USP7
SE_02_064000363 chr16:8848273-8886769 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 363 14 1746 132 0 58 1609 CARHSP1,PMM2,USP7
SE_02_132201027 chr16:8848284-8852647 Sample_02_1322 Connective Tissue HT1080_WT 1027 2 217 26 0 0 222 PMM2,CARHSP1
SE_02_076201812 chr16:8848284-8887116 Sample_02_0762 Podocyte podocyte_CTL 1812 11 1758 134 1 58 1607 CARHSP1,PMM2,USP7
SE_02_151000135 chr16:8848307-8913958 Sample_02_1510 Lung H3122_LR_Pano 135 23 2798 173 1 185 2820 CARHSP1,USP7,PMM2
SE_02_116700548 chr16:8848312-8886736 Sample_02_1167 Biliary H69_TGF Vehicle_1 548 16 1745 132 0 58 1602 CARHSP1,PMM2,USP7
SE_00_005100343 chr16:8848445-8871717 Sample_00_0051 Adrenal gland adrenal gland 30y 343 18 1183 115 0 53 1575 CARHSP1,PMM2
SE_02_107300576 chr16:8848481-8880513 Sample_02_1073 Keratinocyte keratinocytes stem cell 576 7 1506 126 0 53 1564 CARHSP1,PMM2
SE_02_064200574 chr16:8848510-8886611 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 574 10 1730 132 0 58 1561 CARHSP1,PMM2
SE_02_104800569 chr16:8848533-8884751 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 569 11 1656 130 0 54 1559 CARHSP1,PMM2
SE_02_147500538 chr16:8848538-8885865 Sample_02_1475 Bone CHLA-25 538 9 1706 131 0 58 1558 CARHSP1,PMM2
SE_02_076600678 chr16:8848560-8886268 Sample_02_0766 Ovary PEO1 678 9 1715 132 0 58 1553 CARHSP1,PMM2
SE_02_001500106 chr16:8848588-8870186 Sample_02_0015 Liver HepG2_shNS 106 3 1118 113 0 53 1547 CARHSP1,PMM2
SE_02_136500510 chr16:8848695-8884746 Sample_02_1365 Pancreas AsPC1-untreated 510 10 1648 129 0 54 1523 CARHSP1,PMM2
SE_02_064300782 chr16:8848703-8880387 Sample_02_0643 Mammary gland MDA-MB-436 782 8 1490 125 0 53 1522 CARHSP1,PMM2
SE_02_148200284 chr16:8848778-8880430 Sample_02_1482 Bone POE 284 10 1488 125 0 53 1514 CARHSP1,PMM2
SE_01_008200789 chr16:8848813-8872093 Sample_01_0082 Right lobe of liver right-lobe-of-liver 789 4 1178 114 0 53 1505 CARHSP1,PMM2
SE_02_036200090 chr16:8848955-8872663 Sample_02_0362 Haematopoietic and lymphoid tissue REH 90 3 1190 116 0 53 1489 CARHSP1,PMM2
SE_02_032600672 chr16:8848962-8872858 Sample_02_0326 Liver hepatocytes_d3 672 3 1193 116 0 53 1488 CARHSP1,PMM2
SE_02_075800173 chr16:8848994-8893753 Sample_02_0758 Peripheral blood REH 173 14 1994 142 1 68 1722 CARHSP1,USP7,PMM2
SE_01_010100912 chr16:8849129-8878884 Sample_01_0101 Pancreas pancreas_54y 912 10 1414 123 0 53 1452 CARHSP1,PMM2
SE_02_125100421 chr16:8849260-8894169 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 421 20 1989 141 1 88 1717 CARHSP1,USP7,PMM2
SE_02_153900674 chr16:8849498-8885824 Sample_02_1539 Nasopharyngeal C666-1 674 9 1655 127 0 58 1390 CARHSP1
SE_01_008801168 chr16:8850042-8871937 Sample_01_0088 Tibial nerve tibial-nerve 1168 4 1107 106 0 53 1385 CARHSP1
SE_02_125000496 chr16:8850055-8893748 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 496 14 1940 135 1 68 1618 CARHSP1,USP7
SE_02_012800403 chr16:8850157-8880420 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 403 12 1416 117 0 53 1385 CARHSP1
SE_02_001400102 chr16:8850317-8870072 Sample_02_0014 Liver HepG2_shBRG1 102 3 1026 104 0 53 1385 CARHSP1
SE_02_092100982 chr16:8850437-8869028 Sample_02_0921 Heart embryonic heart_CS22 982 2 988 99 0 47 1320 CARHSP1
SE_02_103200378 chr16:8850875-8885052 Sample_02_1032 Head and neck SCC1 JQ1 378 16 1557 118 0 54 1385 CARHSP1
SE_02_075701132 chr16:8852960-8869070 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 1132 2 855 81 0 48 1306 CARHSP1
SE_02_077500212 chr16:8857514-8888700 Sample_02_0775 Pancreas EndoC-BH1_SE 212 15 1290 77 1 46 915 CARHSP1,USP7
SE_02_082600658 chr16:8857849-8881459 Sample_02_0826 Stomach gastric tumor 658 12 1009 67 0 41 915 CARHSP1
SE_02_028600464 chr16:8858041-8870201 Sample_02_0286 Liver HuH7_IL-1alpha_1h 464 1 586 52 0 41 915 CARHSP1
SE_00_001400675 chr16:8858407-8870248 Sample_00_0014 Heart left ventricle heart-left-ventricle 675 1 562 48 0 37 861 CARHSP1
SE_02_081900775 chr16:8859643-8885450 Sample_02_0819 Ovary Mucinous ovarian cancer 775 8 1041 59 0 35 690 CARHSP1
SE_02_103100416 chr16:8859691-8885088 Sample_02_1031 Head and neck SCC1 contol 416 13 1021 59 0 33 690 CARHSP1
SE_00_002001466 chr16:8861241-8887226 Sample_00_0020 Large intestine large-intestine_108d 1466 4 992 49 1 37 605 CARHSP1
SE_02_004900591 chr16:8862253-8870023 Sample_02_0049 Embryo endodermal CyT49_GTtoH 591 1 297 22 0 28 476 CARHSP1
SE_02_001700354 chr16:8862503-8870056 Sample_02_0017 Embryo H9_ESC 354 1 292 22 0 27 476 CARHSP1
SE_00_003601367 chr16:8862648-8887235 Sample_00_0036 Small intestine small-intestine_108days 1367 5 927 44 1 32 476 CARHSP1
SE_02_093001402 chr16:8863187-8884686 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1402 8 810 37 0 28 476 CARHSP1
SE_02_102700333 chr16:8863371-8880458 Sample_02_1027 Esophagus KYSE180_1 333 8 647 31 0 27 476 CARHSP1
SE_02_147600446 chr16:8864206-8880435 Sample_02_1476 Bone EW-1 446 4 609 30 0 27 476 CARHSP1
SE_02_024700086 chr16:8864397-8964976 Sample_02_0247 Haematopoietic and lymphoid tissue MOLT4_2 86 11 3826 168 5 270 2503 CARHSP1,USP7
SE_02_105801247 chr16:8864593-8880296 Sample_02_1058 Bone A673_SA2 Rescue 1247 4 587 29 0 27 476 CARHSP1
SE_02_107100288 chr16:8866362-8872165 Sample_02_1071 Blood Jurkat_WT 288 2 200 10 0 22 476 CARHSP1
SE_02_003100809 chr16:8905238-8925311 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 809 3 767 31 2 86 431 USP7,CARHSP1
SE_02_022500433 chr16:8905244-8924904 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 433 2 743 31 2 86 431 USP7,CARHSP1

Genomic distribution of SEs associated with CARHSP1

The strength of the tissue affected by the gene


Expression of CARHSP1