SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000175262
Gene: C1ORF127 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:10946471-10982037 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103602135 chr1:10886272-10903381 Sample_02_1036 Mammary gland HCC70_XY018 2135 11 498 11 1 61 0 C1ORF127
SE_02_031900222 chr1:10887335-10912293 Sample_02_0319 Neuroblastoma NB-EBc1 222 3 746 16 2 146 0 C1ORF127,CASZ1
SE_02_031300279 chr1:10887703-10912203 Sample_02_0313 Neuroblastoma SK-N-DZ 279 4 727 16 1 146 0 C1ORF127,CASZ1
SE_02_150000124 chr1:10887714-10911934 Sample_02_1500 Brain KELLY_untreat 124 6 716 16 1 146 0 C1ORF127,CASZ1
SE_02_123500178 chr1:10887849-10914540 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 178 10 794 18 1 150 0 C1ORF127,CASZ1
SE_02_029700367 chr1:10887857-10912196 Sample_02_0297 Neuroblastoma CLB-CAR 367 2 724 16 1 146 0 C1ORF127,CASZ1
SE_02_110900090 chr1:10887878-10913313 Sample_02_1109 Brain SK-N-FI 90 9 760 17 1 146 0 C1ORF127,CASZ1
SE_02_031400320 chr1:10887901-10925337 Sample_02_0314 Neuroblastoma SK-N-FI 320 4 1115 28 2 174 0 C1ORF127,TARDBP
SE_02_030800247 chr1:10888001-10912325 Sample_02_0308 Neuroblastoma SJNB1 247 7 725 16 1 146 0 C1ORF127,CASZ1
SE_02_007500065 chr1:10888070-10911853 Sample_02_0075 Autonomic ganglia kelly_DMSO_3h 65 4 704 16 1 146 0 C1ORF127,CASZ1
SE_02_030400560 chr1:10888111-10912158 Sample_02_0304 Neuroblastoma N206 560 2 715 16 1 146 0 C1ORF127,CASZ1
SE_02_025300160 chr1:10888120-10912262 Sample_02_0253 Brain BE2C_DMSO 160 2 720 16 1 146 0 C1ORF127,CASZ1
SE_02_042100250 chr1:10888140-10911349 Sample_02_0421 Brain BE2C_3 250 3 689 16 1 146 0 C1ORF127,CASZ1
SE_02_029800387 chr1:10888141-10912584 Sample_02_0298 Neuroblastoma CLB-GA 387 7 732 16 1 146 0 C1ORF127,CASZ1
SE_02_025100239 chr1:10888171-10912258 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 239 3 719 16 1 146 0 C1ORF127,CASZ1
SE_02_033800101 chr1:10888231-10912195 Sample_02_0338 Neuroblastoma BE2 101 5 714 16 1 146 0 C1ORF127,CASZ1
SE_02_106300346 chr1:10888277-10912177 Sample_02_1063 Brain CLB-GA-control 346 10 714 16 1 146 0 C1ORF127,TARDBP
SE_02_039600487 chr1:10888282-10920731 Sample_02_0396 Skin NHEK-D 487 6 987 28 1 174 0 C1ORF127,CASZ1
SE_02_110400730 chr1:10888364-10912822 Sample_02_1104 Brain NB-69 730 8 738 17 1 146 0 C1ORF127,TARDBP
SE_02_030600429 chr1:10888847-10912301 Sample_02_0306 Autonomic ganglia SH-SY5Y 429 3 706 15 1 141 0 C1ORF127,CASZ1
SE_02_110800146 chr1:10889056-10912893 Sample_02_1108 Brain SK-N-BE_2_-C 146 7 725 16 1 134 0 C1ORF127,CASZ1
SE_02_106400562 chr1:10889081-10912049 Sample_02_1064 Brain CLB-GA-Dinaciclib_8h 562 7 691 15 1 134 0 C1ORF127,TARDBP
SE_02_102600200 chr1:10889122-10921718 Sample_02_1026 Esophagus KYSE200 200 15 996 27 1 162 0 C1ORF127
SE_00_003101074 chr1:10889170-10905234 Sample_00_0031 Placenta placenta 1074 2 483 12 0 65 0 C1ORF127,TARDBP
SE_02_034000256 chr1:10889218-10912172 Sample_02_0340 Brain BE2C_2 256 3 696 15 1 134 0 C1ORF127,CASZ1
SE_02_029600592 chr1:10889300-10912068 Sample_02_0296 Neuroblastoma CLB-BER-Lud 592 3 688 15 1 134 0 C1ORF127
SE_02_010500289 chr1:10889477-10903442 Sample_02_0105 Skin neonatal_keratinocytes 289 2 427 10 0 49 0 C1ORF127,CASZ1
SE_02_102700403 chr1:10889494-10921602 Sample_02_1027 Esophagus KYSE180_1 403 14 990 27 1 162 0 C1ORF127
SE_02_113200609 chr1:10889665-10921304 Sample_02_1132 Pancreas KLM1 wt 609 10 972 27 1 162 0 C1ORF127,TARDBP
SE_02_050400497 chr1:10889735-10921373 Sample_02_0504 Esophagus KYSE510_1 497 13 972 27 1 162 0 C1ORF127,TARDBP
SE_02_102900956 chr1:10889773-10911269 Sample_02_1029 Colon HCT116 956 11 658 15 1 134 0 C1ORF127
SE_02_006300922 chr1:10889879-10921430 Sample_02_0063 Skin Keratinocytes 922 4 970 27 1 162 0 C1ORF127,TARDBP
SE_03_000300179 chr1:10890172-10903211 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 179 2 402 10 0 49 0 C1ORF127
SE_02_050700439 chr1:10890279-10902511 Sample_02_0507 Esophagus TE7_1 439 5 377 10 0 49 0 C1ORF127
SE_02_050300469 chr1:10890318-10902862 Sample_02_0503 Esophagus KYSE140_1 469 2 391 10 0 49 0 C1ORF127
SE_02_051500469 chr1:10890318-10902862 Sample_02_0515 Esophagus KYSE140 469 2 391 10 0 49 0 C1ORF127
SE_02_050600493 chr1:10890652-10920699 Sample_02_0506 Esophagus TE5_1 493 9 940 27 1 162 0 C1ORF127
SE_02_051700490 chr1:10890653-10920698 Sample_02_0517 Esophagus TE5 490 9 940 27 1 162 0 C1ORF127
SE_02_110700764 chr1:10890712-10911643 Sample_02_1107 Brain SK-N-AS 764 6 647 15 1 134 0 C1ORF127,TARDBP
SE_02_093001541 chr1:10891115-10903002 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1541 6 376 10 0 49 0 C1ORF127,TARDBP
SE_02_153900517 chr1:10891412-10920463 Sample_02_1539 Nasopharyngeal C666-1 517 9 910 25 1 159 0 C1ORF127
SE_02_094700661 chr1:10897213-10903051 Sample_02_0947 Tongue Cal27 661 1 190 5 0 49 0 C1ORF127
SE_02_104700795 chr1:10897338-10944570 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 795 23 1436 46 2 240 0 C1ORF127,TARDBP
SE_01_002700891 chr1:10897420-10902581 Sample_01_0027 Prostate epithelial-cell-of-prostate 891 1 165 5 0 47 0 C1ORF127,CASZ1
SE_01_006100083 chr1:10897759-10904264 Sample_01_0061 Prostate RWPE1 83 1 214 5 0 49 0 C1ORF127,CASZ1
SE_02_040700479 chr1:10897779-10904173 Sample_02_0407 Brain BT16 479 1 208 5 0 49 0 C1ORF127,CASZ1
SE_02_104600518 chr1:10898042-10976131 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 518 31 2464 139 8 417 1392 C1ORF127,TARDBP
SE_02_021600781 chr1:10898622-10914899 Sample_02_0216 Skin NHEK_scramble 781 5 507 11 1 121 0 C1ORF127,TARDBP
SE_02_104301196 chr1:10898988-10940705 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1196 19 1268 32 2 188 0 C1ORF127
SE_02_142000317 chr1:10899100-10905087 Sample_02_1420 Brain DIPG007 317 4 190 4 0 34 0 C1ORF127
SE_02_072500427 chr1:10899677-10902097 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 427 3 75 1 0 30 0 C1ORF127
SE_02_072600311 chr1:10899697-10902032 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 311 3 73 1 0 30 0 C1ORF127,CASZ1
SE_02_104801568 chr1:10901478-10920407 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1568 10 599 18 1 111 0 C1ORF127
SE_01_004400291 chr1:10903501-10942445 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 291 7 1160 35 2 182 0 C1ORF127,TARDBP
SE_02_077500758 chr1:10915041-11016093 Sample_02_0775 Pancreas EndoC-BH1_SE 758 31 3230 235 14 322 1707 TARDBP,C1ORF127,SRM,MASP2
SE_02_042400412 chr1:10933590-10945158 Sample_02_0424 Colon SW620 412 1 337 23 0 73 0 C1ORF127
SE_02_035400885 chr1:10933734-10980996 Sample_02_0354 Colon Colo205 885 9 1542 136 9 257 1443 C1ORF127,TARDBP
SE_02_052200154 chr1:10933948-10944617 Sample_02_0522 Colon SW620 154 4 308 21 0 72 0 C1ORF127
SE_02_110500625 chr1:10934350-10976623 Sample_02_1105 Brain NBL-S 625 15 1364 116 6 256 1443 C1ORF127,TARDBP
SE_02_128300090 chr1:10934392-10970605 Sample_02_1283 Lung NCI-H2107_p8-15 90 12 1149 101 2 246 1369 C1ORF127,TARDBP
SE_02_148100059 chr1:10934721-11007638 Sample_02_1481 Bone MIC 59 23 2379 192 13 266 1523 C1ORF127,TARDBP,MASP2
SE_02_052100263 chr1:10934844-10980287 Sample_02_0521 Colon SW480 263 7 1480 129 9 249 1443 C1ORF127,TARDBP
SE_02_143301737 chr1:10934892-10992544 Sample_02_1433 Bone A673 STAG2 null 1737 20 1895 176 13 254 1523 C1ORF127,TARDBP
SE_02_143201383 chr1:10935065-10992822 Sample_02_1432 Bone A673 STAG2 WT 1383 25 1901 176 13 254 1523 C1ORF127,TARDBP
SE_02_129400023 chr1:10937220-10976334 Sample_02_1294 Lung JHU-LX44-SCLC PDX 23 18 1272 111 6 247 1429 C1ORF127,TARDBP
SE_02_052300091 chr1:10937264-10974235 Sample_02_0523 Lung NCIH810 91 8 1182 105 5 237 1369 C1ORF127,TARDBP
SE_02_128700011 chr1:10937297-10976479 Sample_02_1287 Lung NCI-H510_p8-15 11 19 1277 111 6 247 1443 C1ORF127,TARDBP
SE_02_147600306 chr1:10937305-10995311 Sample_02_1476 Bone EW-1 306 13 1939 172 13 258 1523 C1ORF127,TARDBP
SE_02_148000026 chr1:10938556-11014937 Sample_02_1480 Bone MHH-ES-1 26 15 2478 210 13 272 1707 TARDBP,C1ORF127,SRM,MASP2
SE_02_147400114 chr1:10939462-10995652 Sample_02_1474 Bone CHLA-10 114 16 1899 169 13 249 1523 C1ORF127,TARDBP
SE_02_147900152 chr1:10939835-10995869 Sample_02_1479 Bone EW-7 152 19 1893 168 13 249 1523 C1ORF127,TARDBP
SE_02_004700343 chr1:10941506-10977214 Sample_02_0047 Pancreatic endoderm IIDP/donor790 343 8 1186 110 6 215 1443 C1ORF127,TARDBP
SE_02_003200894 chr1:10941506-10981137 Sample_02_0032 Pancreas pancreatic-islets-M 894 8 1328 124 9 216 1443 C1ORF127,TARDBP
SE_02_133000718 chr1:10941810-10977290 Sample_02_1330 Blood AMU-AML1 718 13 1184 109 6 200 1443 C1ORF127,TARDBP
SE_02_129500009 chr1:10943262-10970045 Sample_02_1295 Lung JHU-LX48-SCLC PDX 9 18 870 84 2 175 1326 C1ORF127,TARDBP
SE_02_036800420 chr1:10943637-10981512 Sample_02_0368 Skeletal muscle NS134 420 6 1279 118 9 189 1443 C1ORF127,TARDBP
SE_02_069000005 chr1:10943858-10974238 Sample_02_0690 Lung NCI-H510A_no infection 5 13 988 91 5 178 1369 C1ORF127,TARDBP
SE_02_103600669 chr1:10951209-11033818 Sample_02_1036 Mammary gland HCC70_XY018 669 26 2588 205 12 362 1803 TARDBP,C1ORF127,MASP2,SRM
SE_02_146001298 chr1:10956938-10986755 Sample_02_1460 Blood Mutz-3 1298 7 1011 81 10 142 672 C1ORF127,TARDBP
SE_02_068600407 chr1:10958174-10971000 Sample_02_0686 Lung NCI-H128_no infection 407 11 390 19 0 103 342 C1ORF127,TARDBP
SE_02_129200291 chr1:10958364-10976434 Sample_02_1292 Lung JHU-LX110-SCLC PDX 291 11 585 33 4 113 410 C1ORF127,TARDBP
SE_02_148300333 chr1:10960545-10995725 Sample_02_1483 Bone RD-ES 333 15 1203 87 11 107 430 C1ORF127,TARDBP
SE_02_128000202 chr1:10960676-10997728 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 202 10 1252 89 11 95 430 C1ORF127,TARDBP,MASP2
SE_02_152201043 chr1:10974527-10982632 Sample_02_1522 Skin A375 RTKi 1043 2 290 24 4 15 154 C1ORF127,TARDBP
SE_00_001000852 chr1:10975529-10982027 Sample_00_0010 Embryo endodermal-cell 852 2 227 20 3 13 114 C1ORF127,TARDBP
Genomic distribution of SEs associated with C1ORF127
Genome Browser

The strength of the tissue affected by the gene

Expression of C1ORF127

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)