SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_053200265
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D
Genomic region: chr1:146179544-146226922
Size: 47378
Super-enhancer rank 265
Number of SE elements: 19
ChIP density(Case|Control): 16767.0742|3430.1672
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NOTCH2NL ;
ROSE Overlap NOTCH2NL ;
ROSE Proximal NBPF10 ;
ROSE Closest NOTCH2NL ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NOTCH2NL ; NBPF10 ; NUDT4P1 ; NUDT4P2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_053200265 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers