SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_053200379
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D
Genomic region: chr15:40766275-40803922
Size: 37647
Super-enhancer rank 379
Number of SE elements: 9
ChIP density(Case|Control): 22324.671|11542.5702
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C15ORF62 ;
ROSE Overlap C15orf62 ; DNAJC17 ; GCHFR ;
ROSE Proximal ZFYVE19 ; PPP1R14D ; RMDN3 ; SPINT1 ;
ROSE Closest C15orf62 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GCHFR ; RAD51 ; PPP1R14D ; SPINT1 ; RMDN3 ; RAD51-AS1 ; ZFYVE19 ; RHOV ; DNAJC17 ; C15orf62 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_053200379 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers