| T(co)F: | RARA |
| Species: | Homo sapiens |
| Knock-Method: | siRNA |
| T(co)F Class: | Nuclear receptors with C4 zinc fingers |
| T(co)F Superclass: | Zinc-coordinating DNA-binding domains |
| Biosample Name: | MCF7 |
| Tissue Type: | Mammary_gland |
| Biosample Type: | Cell line |
| # of Control: | 4 | # of Treat: | 2 |
| Data Source: | GEO |
| Profile ID: | GSE26298 |
| Platform: | GPL570 |
| Pubmed ID: | 21299862 |
#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines
| Target Gene | T(co)F | Mean
Expr. of
Control
|
Mean
Expr. of
Treat
|
Fold Change | Log2FC | Rank | P-value | Corrected _P |
Promoter _T(co)F |
SE_T(co)F | TE_T(co)F |
|---|
| T(co)F | Pathway Name | Source | Gene Number |
|---|---|---|---|
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 Signaling by Retinoic Acid |
Reactome | 20 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 RXR and RAR heterodimerization with other nuclear receptor |
PID | 26 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 Retinoic acid receptors-mediated signaling |
PID | 30 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 FSH |
NetPath | 44 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 Hs_Tryptophan_metabolism_WP465_85055 |
WikiPathways | 45 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 Nuclear Receptor transcription pathway |
Reactome | 51 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 Acute myeloid leukemia |
KEGG | 53 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 IL3 |
NetPath | 84 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 Activation of anterior HOX genes in hindbrain development during early embryogenesis |
Reactome | 120 |
| RARA | Warning: Undefined variable $tf_pathway_species in /data/html/KnockTF/search/search_sample_result.php on line 779 Warning: Undefined variable $snp_id in /data/html/KnockTF/search/search_sample_result.php on line 779 Pathways in cancer |
KEGG | 321 |