Download Expression Profile of Each Dataset

Knock-Method TF TF Class TF Superclass Biosample Name Tissue
Type
Biosample Type Data Source Profile ID Platform Pubmed ID Download
siRNA ESR1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains MCF7 Mammary_
gland
Cell line GEO GSE10061 GPL3921 18631401 txt
siRNA POU5F1 Homeo domain factors Helix-turn-helix domains GBS6 Bone_marrow Cell line GEO GSE12320 GPL570 20203285 txt
siRNA PROX1 Homeo domain factors Helix-turn-helix domains Primary lymphatic endothelial cells Foreskin Primary cell GEO GSE12846 GPL570 18815287 txt
siRNA NR2F2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains Primary lymphatic endothelial cells Foreskin Primary cell GEO GSE12846 GPL570 18815287 txt
siRNA WT1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains PLC/PRF/5 Liver Cell line GEO GSE12886 GPL570 19190340 txt
siRNA BCL11A C2H2 zinc finger factors Zinc-coordinating DNA-binding domains CD34-derived erythroid progenitors Peripheral_
blood
Primary cell GEO GSE13284 GPL570 19056937 txt
siRNA TP53 p53 domain factors Immunoglobulin fold U251 Central_
nervous_
system
Cell line GEO GSE13991 GPL1426 19139068 txt
siRNA ERG Tryptophan cluster factors Helix-turn-helix domains HUVEC Umbilical_
vein
Cell line GEO GSE14801 GPL570 19359602 txt
siRNA RUNX1 Runt domain factors Immunoglobulin fold HTB58 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE16238 GPL570 - txt
siRNA RUNX1 Runt domain factors Immunoglobulin fold TF-1 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE16238 GPL570 - txt
siRNA MITF Basic helix-loop-helix factors (bHLH) Basic domains NZM15 Skin Cell line GEO GSE16249 GPL570 - txt
siRNA MITF Basic helix-loop-helix factors (bHLH) Basic domains NZM12 Skin Cell line GEO GSE16249 GPL570 - txt
siRNA PAX3 Paired box factors Helix-turn-helix domains NZM15 Skin Cell line GEO GSE16249 GPL570 - txt
siRNA PAX3 Paired box factors Helix-turn-helix domains NZM12 Skin Cell line GEO GSE16249 GPL570 - txt
siRNA ATM Others ENCODE_
TF
HEK293 Embryo_
kidney
Cell line GEO GSE1676 GPL201 15892871 txt
siRNA RELA Rel homology region (RHR) factors Immunoglobulin fold HEK293 Embryo_
kidney
Cell line GEO GSE1676 GPL201 15892871 txt
siRNA TP53 p53 domain factors Immunoglobulin fold HEK293 Embryo_
kidney
Cell line GEO GSE1676 GPL201 15892871 txt
siRNA STAT6 STAT domain factors Immunoglobulin fold CD4+ T cells Peripheral_
blood
Primary cell GEO GSE17851 GPL6102 20620947 txt
siRNA ATF3 Basic leucine zipper factors (bZIP) Basic domains HCT116 Colon Cell line GEO GSE18457 GPL4133 22046379 txt
siRNA EGR3 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HUVEC Umbilical_
vein
Cell line GEO GSE18913 GPL570 19965691 txt
siRNA TP53 p53 domain factors Immunoglobulin fold SKBR3 Mammary_
gland
Cell line GEO GSE19670 GPL570 20227041 txt
siRNA MYB Tryptophan cluster factors Helix-turn-helix domains Primary CD14-myeloblasts Cord_blood Primary cell GEO GSE21943 GPL96 20686118 txt
siRNA SOX2 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains LN229 Central_
nervous_
system
Cell line GEO GSE23838 GPL1426 21211035 txt
siRNA STAT3 STAT domain factors Immunoglobulin fold DU145 Prostate Cell line GEO GSE25867 GPL571 23288901 txt
siRNA STAT6 STAT domain factors Immunoglobulin fold NCI-H460 Lung Cell line GEO GSE25942 GPL6884 22162773 txt
siRNA RARA Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains MCF7 Mammary_
gland
Cell line GEO GSE26298 GPL570 21299862 txt
siRNA TFAP2C Basic helix-span-helix factors (bHSH) Basic domains MCF7 Mammary_
gland
Cell line GEO GSE26740 GPL6883 21572391 txt
siRNA PITX2 Homeo domain factors Helix-turn-helix domains TM1 Eye Primary cell GEO GSE27275 GPL6883 - txt
siRNA PITX2 Homeo domain factors Helix-turn-helix domains TM2 Eye Primary cell GEO GSE27275 GPL6883 - txt
siRNA ZEB2 Homeo domain factors Helix-turn-helix domains MDA-MB231 Mammary_
gland
Cell line GEO GSE27966 GPL570 - txt
siRNA BACH1 Basic leucine zipper factors (bZIP) Basic domains HEK293T Embryo_
kidney
Cell line GEO GSE28050 GPL570 21555518 txt
siRNA NFE2L2 Basic leucine zipper factors (bZIP) Basic domains A549 Lung Cell line GEO GSE28230 GPL4133 22789539 txt
siRNA GATA2 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains HMVEC Endothelium Cell line GEO GSE28304 GPL570 21666600 txt
siRNA RUNX2 Runt domain factors Immunoglobulin fold MCF7VP Mammary_
gland
Cell line GEO GSE28414 GPL570 - txt
siRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains A549 Lung Cell line GEO GSE28433 GPL6104 22205655 txt
siRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains MCF7 Mammary_
gland
Cell line GEO GSE28433 GPL6104 22205655 txt
siRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains HCT116 Colon Cell line GEO GSE28433 GPL6104 22205655 txt
siRNA NKX2-1 Homeo domain factors Helix-turn-helix domains HCC4019 Lung Cell line GEO GSE28480 GPL6947 21907921 txt
siRNA NKX2-1 Homeo domain factors Helix-turn-helix domains H3255 Lung Cell line GEO GSE28480 GPL6947 21907921 txt
siRNA SNAI1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains A549 Lung Cell line GEO GSE28558 GPL6947 20887892 txt
siRNA HOXD9 Homeo domain factors Helix-turn-helix domains U87 Central_
nervous_
system
Cell line GEO GSE28618 GPL570 21600039 txt
siRNA ELF5 Tryptophan cluster factors Helix-turn-helix domains HCC1937 Mammary_
gland
Cell line GEO GSE30405 GPL6244 23300383 txt
siRNA CEBPD Basic leucine zipper factors (bZIP) Basic domains A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA CEBPZ Others TcoF-DB_
TF
A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA ETS1 Tryptophan cluster factors Helix-turn-helix domains A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA FOXM1 Fork head / winged helix factors Helix-turn-helix domains A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA HSF2 Heat shock factors Helix-turn-helix domains A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA MITF Basic helix-loop-helix factors (bHLH) Basic domains A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA RELA Rel homology region (RHR) factors Immunoglobulin fold A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA SP1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA SP100 SAND domain factors alpha-Helices exposed by beta-structures A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA STAT1 STAT domain factors Immunoglobulin fold A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA STAT3 STAT domain factors Immunoglobulin fold A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA STAT6 STAT domain factors Immunoglobulin fold A375 Skin Cell line GEO GSE31534 GPL570 22536322 txt
siRNA HIF1A Basic helix-loop-helix factors (bHLH) Basic domains MCF7 Mammary_
gland
Cell line GEO GSE3188 GPL570 16565084 txt
siRNA HIF1A Basic helix-loop-helix factors (bHLH) Basic domains MCF7 Mammary_
gland
Cell line GEO GSE3188 GPL2507 16565084 txt
siRNA FOXP1 Fork head / winged helix factors Helix-turn-helix domains HUVEC Umbilical_
vein
Cell line GEO GSE32968 GPL6480 24023716 txt
siRNA NR2F2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains PC3 Prostate Cell line GEO GSE33182 GPL570 23201680 txt
siRNA NR2F2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains HUVEC Umbilical_
vein
Cell line GEO GSE33301 GPL570 22734039 txt
siRNA ETV6 Tryptophan cluster factors Helix-turn-helix domains LOUCY Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE33820 GPL10558 22162831 txt
siRNA RUNX1 Runt domain factors Immunoglobulin fold SKNO-1 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE34594 GPL10558 22343733 txt
siRNA FOS Basic leucine zipper factors (bZIP) Basic domains MCF7 Mammary_
gland
Cell line GEO GSE36586 GPL14550 22791811 txt
siRNA FOXA1 Fork head / winged helix factors Helix-turn-helix domains LNCaP Prostate Cell line GEO GSE37314 GPL10558 23539448 txt
siRNA HOXA1 Homeo domain factors Helix-turn-helix domains IMR90 Lung_fibroblast Cell line GEO GSE37690 GPL13607 23222703 txt
siRNA ESR1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains MCF7 Mammary_
gland
Cell line GEO GSE37820 GPL570 - txt
siRNA HSF1 Heat shock factors Helix-turn-helix domains HSC3 Upper_
aerodigestive_
tract
Cell line GEO GSE38058 GPL570 - txt
siRNA GABPA Tryptophan cluster factors Helix-turn-helix domains A549 Lung Cell line GEO GSE38332 GPL570 23921124 txt
siRNA ARID1A ARID domain factors Helix-turn-helix domains OE33 Oesophagus Cell line GEO GSE38380 GPL15207 23318448 txt
siRNA ID1 Others Basic domains A549 Lung Cell line GEO GSE38944 GPL570 - txt
siRNA ID1 Others Basic domains H1650 Lung Cell line GEO GSE38944 GPL570 - txt
siRNA GATA3 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains MCF7 Mammary_
gland
Cell line GEO GSE39623 GPL6947 23172872 txt
siRNA ZIC2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains PANC1 Pancreas Cell line GEO GSE39704 GPL10332 26318045 txt
siRNA FOXM1 Fork head / winged helix factors Helix-turn-helix domains U87 Central_
nervous_
system
Cell line GEO GSE40051 GPL570 22977194 txt
siRNA ZNF91 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA ZNF100 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA ZNF43 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA ZNF85 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA ZNF254 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA ZNF431 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA ZNF665 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA ZNF708 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains GIST-T1 Gastrointestinal_
tissue
Cell line GEO GSE40080 GPL5175 - txt
siRNA EGR4 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains SBC-5 Lung Cell line GEO GSE40558 GPL6480 - txt
siRNA REST C2H2 zinc finger factors Zinc-coordinating DNA-binding domains Smooth muscle cells Uterus In vitro differentiated cell GEO GSE41386 GPL570 23284171 txt
siRNA POLR3A Others ENCODE_
TF
MCF7 Mammary_
gland
Cell line GEO GSE42239 GPL570 26067234 txt
siRNA NR3C1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains Endometrial stromal cells Uterus Primary cell GEO GSE42538 GPL6244 23275455 txt
siRNA LEF1 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains BL2 Lymph Cell line GEO GSE42637 GPL570 23375451 txt
siRNA GLI2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains U2OS Bone_marrow Cell line GEO GSE42903 GPL6244 - txt
siRNA REST C2H2 zinc finger factors Zinc-coordinating DNA-binding domains H295R/TR Adrenal_
gland
Cell line GEO GSE43033 GPL6244 23907384 txt
siRNA SF1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains H295R/TR Adrenal_
gland
Cell line GEO GSE43033 GPL6244 23907384 txt
siRNA EHF Tryptophan cluster factors Helix-turn-helix domains Corneal epithelial cells Corneal_
epithelial
Primary cell GEO GSE43157 GPL6244 24142692 txt
siRNA ETS2 Tryptophan cluster factors Helix-turn-helix domains H441 Lung Cell line GEO GSE43459 GPL6244 23659968 txt
siRNA LIN28B Others beta-Scaffold Factors HEK293 Embryo_
kidney
Cell line GEO GSE44613 GPL570 23481595 txt
siRNA RUNX1 Runt domain factors Immunoglobulin fold Kasumi-1 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE45743 GPL6244 24055056 txt
siRNA MYCN Basic helix-loop-helix factors (bHLH) Basic domains SKNBE2 Autonomic_
ganglia
Cell line GEO GSE45967 GPL13158 25925418 txt
siRNA ELK1 Tryptophan cluster factors Helix-turn-helix domains CD4+ T cells Peripheral_
blood
Primary cell GEO GSE46333 GPL14550 24401939 txt
siRNA GATA3 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains CD4+ T cells Peripheral_
blood
Primary cell GEO GSE46333 GPL14550 24401939 txt
siRNA JUN Basic leucine zipper factors (bZIP) Basic domains CD4+ T cells Peripheral_
blood
Primary cell GEO GSE46333 GPL14550 24401939 txt
siRNA MAF Basic leucine zipper factors (bZIP) Basic domains CD4+ T cells Peripheral_
blood
Primary cell GEO GSE46333 GPL14550 24401939 txt
siRNA NFATC3 Others beta-Scaffold Factors CD4+ T cells Peripheral_
blood
Primary cell GEO GSE46333 GPL14550 24401939 txt
siRNA NFKB1 Rel homology region (RHR) factors Immunoglobulin fold CD4+ T cells Peripheral_
blood
Primary cell GEO GSE46333 GPL14550 24401939 txt
siRNA STAT3 STAT domain factors Immunoglobulin fold CD4+ T cells Peripheral_
blood
Primary cell GEO GSE46333 GPL14550 24401939 txt
siRNA HOXB7 Homeo domain factors Helix-turn-helix domains MIA PaCa-2 Pancreas Cell line GEO GSE46393 GPL10332 24088503 txt
siRNA HOXB7 Homeo domain factors Helix-turn-helix domains Capan-1 Pancreas Cell line GEO GSE46393 GPL10332 24088503 txt
siRNA FOSL1 Basic leucine zipper factors (bZIP) Basic domains BT549 Mammary_
gland
Cell line GEO GSE46440 GPL11532 24830720 txt
siRNA JUN Basic leucine zipper factors (bZIP) Basic domains BT549 Mammary_
gland
Cell line GEO GSE46440 GPL11532 24830720 txt
siRNA ESRRG Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains Trophoblast cells Placenta_
tissue
In vitro differentiated cell GEO GSE46463 GPL10558 23584901 txt
siRNA NR4A1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains PANC1 Pancreas Cell line GEO GSE46994 GPL10558 24515801 txt
siRNA TP53 p53 domain factors Immunoglobulin fold SAECs Lung Cell line GEO GSE47436 GPL570 24726368 txt
siRNA NR2F2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains TOV112D Ovary Cell line GEO GSE47438 GPL6947 23690307 txt
siRNA NR2F2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains ES2 Ovary Cell line GEO GSE47438 GPL6947 23690307 txt
siRNA STAT3 STAT domain factors Immunoglobulin fold OE21 Oesophagus Cell line GEO GSE47763 GPL10558 23912451 txt
siRNA STAT3 STAT domain factors Immunoglobulin fold OE33 Oesophagus Cell line GEO GSE47763 GPL10558 23912451 txt
siRNA NR5A2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains MCF7 Mammary_
gland
Cell line GEO GSE47803 GPL6947 24049078 txt
siRNA STAT3 STAT domain factors Immunoglobulin fold Scaber Urothelial Cell line GEO GSE48124 GPL10558 24525232 txt
siRNA TCF4 Basic helix-loop-helix factors (bHLH) Basic domains SH-SY5Y Autonomic_
ganglia
Cell line GEO GSE48367 GPL13915 24058414 txt
siRNA HSF1 Heat shock factors Helix-turn-helix domains PC3 Prostate Cell line GEO GSE48672 GPL10558 26119944 txt
siRNA HSF2 Heat shock factors Helix-turn-helix domains PC3 Prostate Cell line GEO GSE48672 GPL10558 26119944 txt
siRNA PGR Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains Endometrial stromal cells Uterus Primary cell GEO GSE48853 GPL571 25875046 txt
siRNA SPDEF Tryptophan cluster factors Helix-turn-helix domains MCF7 Mammary_
gland
Cell line GEO GSE48928 GPL10558 24043118 txt
siRNA AR Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains R1-D567 Prostate Cell line GEO GSE49196 GPL10904 24101480 txt
siRNA GATA2 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains LNCaP Prostate Cell line GEO GSE49342 GPL14550 24448395 txt
siRNA TP63 p53 domain factors Immunoglobulin fold HaCaT RG Immortalized_
keratinocyte
Cell line GEO GSE4975 GPL96 16885358 txt
siRNA TP63 p53 domain factors Immunoglobulin fold HaCaT RG Immortalized_
keratinocyte
Cell line GEO GSE4975 GPL97 16885358 txt
siRNA TP63 p53 domain factors Immunoglobulin fold SCC-1 Head_and_
neck
Cell line GEO GSE4975 GPL96 16885358 txt
siRNA TP63 p53 domain factors Immunoglobulin fold SCC-1 Head_and_
neck
Cell line GEO GSE4975 GPL97 16885358 txt
siRNA TP63 p53 domain factors Immunoglobulin fold HaCaT Immortalized_
keratinocyte
Cell line GEO GSE4975 GPL570 16885358 txt
siRNA TP63 p53 domain factors Immunoglobulin fold SCC-012 Head_and_
neck
Cell line GEO GSE4975 GPL570 16885358 txt
siRNA TP63 p53 domain factors Immunoglobulin fold SCC-6 Head_and_
neck
Cell line GEO GSE4975 GPL570 16885358 txt
siRNA ATF2 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE50165 GPL6884 - txt
siRNA FOXP1 Fork head / winged helix factors Helix-turn-helix domains OCI-Ly10 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE51382 GPL570 25267198 txt
siRNA FOXP1 Fork head / winged helix factors Helix-turn-helix domains OCI-Ly1 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE51382 GPL570 25267198 txt
siRNA FOXP1 Fork head / winged helix factors Helix-turn-helix domains OCI-Ly7 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE51382 GPL570 25267198 txt
siRNA REST C2H2 zinc finger factors Zinc-coordinating DNA-binding domains LNCaP Prostate Cell line GEO GSE51461 GPL14550 - txt
siRNA LIN28A Others beta-Scaffold Factors H9 Embryo Stem cell GEO GSE53038 GPL16699 25479749 txt
siRNA ERG Tryptophan cluster factors Helix-turn-helix domains VCaP Prostate Cell line GEO GSE53994 GPL10558 24591637 txt
siRNA KLF9 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HepG2 Liver Cell line GEO GSE54699 GPL10558 25330987 txt
siRNA FOXM1 Fork head / winged helix factors Helix-turn-helix domains MCF7 Mammary_
gland
Cell line GEO GSE55204 GPL96 25213081 txt
siRNA HIF1A Basic helix-loop-helix factors (bHLH) Basic domains Primary human macrophages Blood Cell line GEO GSE56989 GPL6244 25450522 txt
siRNA ESR2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains BT549 Mammary_
gland
Cell line GEO GSE57379 GPL11532 - txt
siRNA MYC Basic helix-loop-helix factors (bHLH) Basic domains Adipose stem cells White_
adipose_
tissue
Stem cell GEO GSE57538 GPL13158 25437437 txt
siRNA ZEB1 Homeo domain factors Helix-turn-helix domains HeLa229 Cervix Cell line GEO GSE57660 GPL570 24845104 txt
siRNA FOXA1 Fork head / winged helix factors Helix-turn-helix domains LNCaP Prostate Cell line GEO GSE58309 GPL6244 25228652 txt
siRNA FOXP1 Fork head / winged helix factors Helix-turn-helix domains LNCaP Prostate Cell line GEO GSE58309 GPL6244 25228652 txt
siRNA ZNF658 Others Zinc-coordinating DNA-binding domains Caco-2 Colon Cell line GEO GSE59385 GPL10558 25582195 txt
siRNA FOXC2 Fork head / winged helix factors Helix-turn-helix domains Lymphatic endothelial cells Lymph Primary cell GEO GSE60152 GPL6244 26389677 txt
siRNA NFYB Heteromeric CCAAT-binding factors Other all-alpha-helical DNA-binding domains U2OS ER-HA-E2F1 Bone_marrow Cell line GEO GSE61272 GPL571 26039627 txt
siRNA TCF4 Basic helix-loop-helix factors (bHLH) Basic domains CTXOE03 Brain Cell line GEO GSE62085 GPL10558 27689884 txt
siRNA EGR2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains A673 Muscle Cell line GEO GSE62090 GPL19264 26214589 txt
siRNA EGR2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains SK-N-MC Neuroepithelium Cell line GEO GSE62090 GPL19264 26214589 txt
siRNA ETS1 Tryptophan cluster factors Helix-turn-helix domains ALLSIL Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE62135 GPL19197 26108691 txt
siRNA RUNX1 Runt domain factors Immunoglobulin fold ALLSIL Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE62140 GPL19197 26108691 txt
siRNA TLX1 Homeo domain factors Helix-turn-helix domains ALLSIL Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE62141 GPL19197 26108691 txt
siRNA GATA6 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains HT29 Colon Cell line GEO GSE62316 GPL16686 26387746 txt
siRNA SMAD2 SMAD/NF-1 DNA-binding domain factors beta-Hairpin exposed by an alpha/beta-scaffold Hep3B Liver Cell line GEO GSE6242 GPL4525 - txt
siRNA SMAD3 SMAD/NF-1 DNA-binding domain factors beta-Hairpin exposed by an alpha/beta-scaffold Hep3B Liver Cell line GEO GSE6242 GPL4525 - txt
siRNA SMAD4 SMAD/NF-1 DNA-binding domain factors beta-Hairpin exposed by an alpha/beta-scaffold Hep3B Liver Cell line GEO GSE6242 GPL4525 - txt
siRNA NFKB2 Rel homology region (RHR) factors Immunoglobulin fold L-1236 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE64234 GPL6244 26988706 txt
siRNA FOXO3 Fork head / winged helix factors Helix-turn-helix domains PANC1 Pancreas Cell line GEO GSE66404 GPL17077 - txt
siRNA OTX2 Homeo domain factors Helix-turn-helix domains Neural precursor cells Brain Cell line GEO GSE66671 GPL16686 - txt
siRNA SIX4 Homeo domain factors Helix-turn-helix domains PEO1 Ovary Cell line GEO GSE67327 GPL10558 - txt
siRNA FOXO1 Fork head / winged helix factors Helix-turn-helix domains HUVEC Umbilical_
vein
Cell line GEO GSE67390 GPL10558 28904225 txt
siRNA SF1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains OsisHESC Endometrial_
tissue
Tissue GEO GSE67524 GPL16699 27018534 txt
siRNA MSX1 Homeo domain factors Helix-turn-helix domains Dental Pulp Cells Tooth Primary cell GEO GSE69992 GPL17077 - txt
siRNA IRF7 Tryptophan cluster factors Helix-turn-helix domains Primary human bronchial epithelial cells Bronchus Primary cell GEO GSE70190 GPL20609 26810609 txt
siRNA AHR Basic helix-loop-helix factors (bHLH) Basic domains THP-1 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE70200 GPL16686 26416282 txt
siRNA ZIC5 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains A375 Skin Cell line GEO GSE70223 GPL570 27671679 txt
siRNA ZIC5 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains SK-MEL-28 Skin Cell line GEO GSE70223 GPL570 27671679 txt
siRNA SP3 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains JURKAT Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE7102 GPL571 - txt
siRNA JUN Basic leucine zipper factors (bZIP) Basic domains BT549 Mammary_
gland
Cell line GEO GSE71977 GPL11532 26792858 txt
siRNA SNAI2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains MCFDCIS Mammary_
gland
Cell line GEO GSE72011 GPL10558 - txt
siRNA RELB Rel homology region (RHR) factors Immunoglobulin fold A549 Lung Cell line GEO GSE73158 GPL10558 - txt
siRNA TFAP4 Basic helix-loop-helix factors (bHLH) Basic domains BE(2)-C Brain Cell line GEO GSE74626 GPL570 27448979 txt
siRNA MYCN Basic helix-loop-helix factors (bHLH) Basic domains BE(2)-C Brain Cell line GEO GSE74626 GPL570 27448979 txt
siRNA EP300 Others ENCODE_
TF
KYSE150 Oesophagus Cell line GEO GSE74742 GPL17586 - txt
siRNA SOX7 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains HUVEC Umbilical_
vein
Cell line GEO GSE75380 GPL13497 - txt
siRNA SOX17 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains HUVEC Umbilical_
vein
Cell line GEO GSE75380 GPL13497 - txt
siRNA ETV5 Tryptophan cluster factors Helix-turn-helix domains hADSC Soft_tissue Stem cell GEO GSE75692 GPL10558 27732649 txt
siRNA SOX9 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains VCaP Prostate Cell line GEO GSE76441 GPL570 27043282 txt
siRNA SOX9 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains VCaP Prostate Cell line GEO GSE76452 GPL570 27043282 txt
siRNA MTF1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains Caco-2 Colon Cell line GEO GSE76510 GPL10558 26824222 txt
siRNA BRD4 Others TcoF-DB_
TcoF
Ovcar8 Ovary Cell line GEO GSE78704 GPL570 - txt
siRNA TFAP2C Basic helix-span-helix factors (bHSH) Basic domains NCI-H292 Lung Cell line GEO GSE79228 GPL16686 - txt
siRNA OVOL2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains Corneal epithelial cells Corneal_
epithelial
Primary cell GEO GSE79251 GPL14550 - txt
siRNA ARNT Basic helix-loop-helix factors (bHLH) Basic domains HSC3 Upper_
aerodigestive_
tract
Cell line GEO GSE80347 GPL2895 - txt
siRNA ERG Tryptophan cluster factors Helix-turn-helix domains HeLa Cervix Cell line GEO GSE80395 GPL10558 27273514 txt
siRNA ZNF25 Others Zinc-coordinating DNA-binding domains hMSC-TERT4 Bone_marrow Cell line GEO GSE83901 GPL16686 27814695 txt
siRNA MYC Basic helix-loop-helix factors (bHLH) Basic domains HCT116 Colon Cell line GEO GSE87693 GPL20844 28847964 txt
siRNA HOXC6 Homeo domain factors Helix-turn-helix domains LNCaP Prostate Cell line GEO GSE9182 GPL96 - txt
siRNA STAT3 STAT domain factors Immunoglobulin fold LX-2 Liver Cell line GEO GSE92638 GPL19251 28154170 txt
siRNA NFE2L2 Basic leucine zipper factors (bZIP) Basic domains A549 Lung Cell line GEO GSE94393 GPL15207 29050246 txt
siRNA GRHL3 Grainyhead domain factors Immunoglobulin fold NHEK Skin Cell line GEO GSE94465 GPL6244 28445475 txt
siRNA REST C2H2 zinc finger factors Zinc-coordinating DNA-binding domains NHEK Skin Cell line GEO GSE94466 GPL6244 28445475 txt
siRNA REST C2H2 zinc finger factors Zinc-coordinating DNA-binding domains NHEK Skin Cell line GEO GSE94467 GPL6244 28445475 txt
siRNA KLF4 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HCE Embryo Stem cell GEO GSE94468 GPL6244 - txt
siRNA KLF7 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HCE Embryo Stem cell GEO GSE94469 GPL6244 - txt
siRNA KLF4 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HCE Embryo Stem cell GEO GSE94470 GPL16686 - txt
siRNA KLF7 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HCE Embryo Stem cell GEO GSE94470 GPL16686 - txt
siRNA GATA3 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains OEC-M1 Oral_cavity Cell line GEO GSE76581 GPL21185 - txt
siRNA HIF1A Basic helix-loop-helix factors (bHLH) Basic domains OEC-M1 Oral_cavity Cell line GEO GSE76581 GPL21185 - txt
siRNA SOX2 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains Undifferentiated hESCs Embryo Stem cell GEO GSE67993 GPL10558 26748419 txt
siRNA SMAD2 SMAD/NF-1 DNA-binding domain factors beta-Hairpin exposed by an alpha/beta-scaffold BxPC-3 Pancreas Cell line GEO GSE8464 GPL4525 - txt
siRNA SMAD3 SMAD/NF-1 DNA-binding domain factors beta-Hairpin exposed by an alpha/beta-scaffold BxPC-3 Pancreas Cell line GEO GSE8464 GPL4525 - txt
siRNA ZNF24 Others Zinc-coordinating DNA-binding domains HEK293 Embryo_
kidney
Cell line GEO GSE14273 GPL6480 - txt
siRNA ELK1 Tryptophan cluster factors Helix-turn-helix domains MDA-MB231 Mammary_
gland
Cell line GEO GSE18849 GPL4133 20005852 txt
siRNA NFYA Heteromeric CCAAT-binding factors Other all-alpha-helical DNA-binding domains MDA-MB231 Mammary_
gland
Cell line GEO GSE18849 GPL4133 20005852 txt
siRNA CDX2 Homeo domain factors Helix-turn-helix domains COLO320 Colon Cell line GEO GSE30181 GPL4133 23112155 txt
siRNA HOXA10 Homeo domain factors Helix-turn-helix domains Endometrial stromal cells Uterus Primary cell GEO GSE35801 GPL15226 - txt
siRNA SOX17 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains HUVEC Umbilical_
vein
Cell line GEO GSE37395 GPL10332 23241958 txt
siRNA GTF2B Others TcoF-DB_
TcoF
HeLa Cervix Cell line GEO GSE48847 GPL4133 - txt
siRNA ZFX C2H2 zinc finger factors Zinc-coordinating DNA-binding domains C4-2B Prostate Cell line ENCODE ENCSR244ZVP - 22955616 txt
siRNA MXI1 Basic helix-loop-helix factors (bHLH) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR631RKH - 22955616 txt
siRNA NFE2L2 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR100ODO - 22955616 txt
siRNA LMNA Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR071JWS - 22955616 txt
siRNA CEBPZ Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR977SOT - 22955616 txt
siRNA ZNF180 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR555CYH - 22955616 txt
siRNA TBL1XR1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR989NEA - 22955616 txt
siRNA VEZF1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR047MQO - 22955616 txt
siRNA ATF3 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR045TQN - 22955616 txt
siRNA ZMIZ1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR509YMP - 22955616 txt
siRNA STAT5A STAT domain factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR174FUO - 22955616 txt
siRNA MAFK Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR640PVZ - 22955616 txt
siRNA KAT2B Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR576FFB - 22955616 txt
siRNA CTCF C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR067CAG - 22955616 txt
siRNA BHLHE40 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR626SFM - 22955616 txt
siRNA CHD1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR181AXM - 22955616 txt
siRNA BACH1 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR793ISR - 22955616 txt
siRNA MAFG Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR136ZPD - 22955616 txt
siRNA RAD21 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR051NHG - 22955616 txt
siRNA LMNB2 Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR669QED - 22955616 txt
siRNA MAX Basic helix-loop-helix factors (bHLH) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR675SDG - 22955616 txt
siRNA ARID3A ARID domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR169DSM - 22955616 txt
siRNA TCP1 Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR301SWM - 22955616 txt
siRNA LMNB1 Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR656ZOI - 22955616 txt
siRNA CHD2 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR261IHP - 22955616 txt
siRNA CDAN1 Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR472UFW - 22955616 txt
siRNA UBTF High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR312FIT - 22955616 txt
siRNA MAZ C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR129WCZ - 22955616 txt
siRNA E2F4 Fork head / winged helix factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR874ZXG - 22955616 txt
siRNA TAL1 Basic helix-loop-helix factors (bHLH) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR336ZWX - 22955616 txt
siRNA BRCA1 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR205BWT - 22955616 txt
siRNA ZNF384 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR965CCM - 22955616 txt
siRNA RCOR1 Tryptophan cluster factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR390GWL - 22955616 txt
siRNA E2F6 Fork head / winged helix factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR820EGA - 22955616 txt
siRNA ZFX C2H2 zinc finger factors Zinc-coordinating DNA-binding domains MCF7 Mammary_
gland
Cell line ENCODE ENCSR005AHI - 22955616 txt
shRNA HNF1A Homeo domain factors Helix-turn-helix domains HuH7 Liver Cell line GEO GSE103128 GPL18180 29466992 txt
shRNA MLXIP Basic helix-loop-helix factors (bHLH) Basic domains HA1ER Embryo_
kidney
Stem cell GEO GSE11242 GPL4133 18458340 txt
shRNA CREB1 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE12056 GPL570 18801183 txt
shRNA TP53 p53 domain factors Immunoglobulin fold iPS cells Dermal_
fibroblasts
Induced pluripotent stem cell GEO GSE13334 GPL4133 19668191 txt
shRNA FLI1 Tryptophan cluster factors Helix-turn-helix domains WE68 Bone_marrow Cell line GEO GSE14543 GPL96 19404404 txt
shRNA FLI1 Tryptophan cluster factors Helix-turn-helix domains SK-N-MC Neuroepithelium Cell line GEO GSE14543 GPL96 19404404 txt
shRNA FLI1 Tryptophan cluster factors Helix-turn-helix domains TC252 Bone_marrow Cell line GEO GSE14543 GPL96 19404404 txt
shRNA FLI1 Tryptophan cluster factors Helix-turn-helix domains STA-ET-1 Bone_marrow Cell line GEO GSE14543 GPL96 19404404 txt
shRNA FLI1 Tryptophan cluster factors Helix-turn-helix domains STA-ET-7.2 Bone_marrow Cell line GEO GSE14543 GPL96 19404404 txt
shRNA YY1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HeLa Cervix Cell line GEO GSE14964 GPL570 20215434 txt
shRNA YY2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HeLa Cervix Cell line GEO GSE14964 GPL570 20215434 txt
shRNA CPEB1 Others Unclassified Structure HeLa Cervix Cell line GEO GSE15549 GPL4133 20364142 txt
shRNA STAT1 STAT domain factors Immunoglobulin fold SCC61 Upper_
aerodigestive_
tract
Cell line GEO GSE15845 GPL6244 19891767 txt
shRNA ERG Tryptophan cluster factors Helix-turn-helix domains VCaP Prostate Cell line GEO GSE16671 GPL6883 20713528 txt
shRNA ETV1 Tryptophan cluster factors Helix-turn-helix domains GIST882 Gastrointestinal_
tissue
Cell line GEO GSE19396 GPL6947 20927104 txt
shRNA ETV1 Tryptophan cluster factors Helix-turn-helix domains GIST48 Gastrointestinal_
tissue
Cell line GEO GSE19396 GPL6947 20927104 txt
shRNA TP53 p53 domain factors Immunoglobulin fold BJ Skin Cell line GEO GSE20076 GPL6884 20228809 txt
shRNA TP63 p53 domain factors Immunoglobulin fold MCF10A Mammary_
gland
Cell line GEO GSE20286 GPL571 16715076/20194747 txt
shRNA TAL1 Basic helix-loop-helix factors (bHLH) Basic domains JURKAT Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE20544 GPL6244 26944678 txt
shRNA TAL1 Basic helix-loop-helix factors (bHLH) Basic domains CD34+ Peripheral_
blood
Primary cell GEO GSE20545 GPL6244 21179004 txt
shRNA POU5F1 Homeo domain factors Helix-turn-helix domains H1-hESC Embryo Stem cell GEO GSE21135 GPL6947 20526341 txt
shRNA CBFB Others beta-Scaffold Factors PPC1 Prostate Cell line GEO GSE21561 GPL6480 20607802 txt
shRNA PRDM14 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains H1-hESC Embryo Stem cell GEO GSE22795 GPL6947 20953172 txt
shRNA RUNX1 Runt domain factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE24778 GPL5188 20959602 txt
shRNA MYB Tryptophan cluster factors Helix-turn-helix domains CD34-derived erythroid progenitors Peripheral_
blood
Primary cell GEO GSE25678 GPL8019 21205891 txt
shRNA NR5A1 Others TcoF-DB_
TF
NCI-H295R Adrenal_
gland
Cell line GEO GSE26529 GPL6244 21239516 txt
shRNA ZEB2 Homeo domain factors Helix-turn-helix domains MDA-MB231 Mammary_
gland
Cell line GEO GSE27966 GPL570 - txt
shRNA TP53 p53 domain factors Immunoglobulin fold Mesenchymal stem cells Bone_marrow In vitro differentiated cell GEO GSE28546 GPL6883 - txt
shRNA PAX2 Paired box factors Helix-turn-helix domains TOV21G Ovary Cell line GEO GSE30501 GPL570 23502471 txt
shRNA ZNF148 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains CD34-derived erythroid progenitors Peripheral_
blood
Primary cell GEO GSE31092 GPL571 21828133 txt
shRNA MLXIP Basic helix-loop-helix factors (bHLH) Basic domains Nalm6 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE33967 GPL6244 22748921 txt
shRNA NANOG Homeo domain factors Helix-turn-helix domains H1-hESC Embryo Stem cell GEO GSE34904 GPL10558 22482508 txt
shRNA POU5F1 Homeo domain factors Helix-turn-helix domains H1-hESC Embryo Stem cell GEO GSE34904 GPL10558 22482508 txt
shRNA SOX2 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains H1-hESC Embryo Stem cell GEO GSE34904 GPL10558 22482508 txt
shRNA SOX2 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains H1-hESC Embryo Stem cell GEO GSE34918 GPL10558 22482508 txt
shRNA SALL4 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains SNU398 Liver Cell line GEO GSE35965 GPL6244 - txt
shRNA IRF2 Tryptophan cluster factors Helix-turn-helix domains Primary CD34+ hematopoietic stem/progenitor cells (HSPCs) Fetal_
liver
Primary cell GEO GSE36988 GPL15394 23041383 txt
shRNA IRF6 Tryptophan cluster factors Helix-turn-helix domains Primary CD34+ hematopoietic stem/progenitor cells (HSPCs) Fetal_
liver
Primary cell GEO GSE36988 GPL15394 23041383 txt
shRNA MYB Tryptophan cluster factors Helix-turn-helix domains Primary CD34+ hematopoietic stem/progenitor cells (HSPCs) Fetal_
liver
Primary cell GEO GSE36988 GPL15394 23041383 txt
shRNA HNF1B Homeo domain factors Helix-turn-helix domains RMG2 Ovary Cell line GEO GSE37290 GPL570 - txt
shRNA FOXA1 Fork head / winged helix factors Helix-turn-helix domains 22RV1 Prostate Cell line GEO GSE37314 GPL10558 23539448 txt
shRNA FOXO1 Fork head / winged helix factors Helix-turn-helix domains EWS-FLI1 Bone Cell line GEO GSE37409 GPL570 23995784 txt
shRNA SPDEF Tryptophan cluster factors Helix-turn-helix domains MCF7 Mammary_
gland
Cell line GEO GSE37662 GPL96 23592399 txt
shRNA ARID1A ARID domain factors Helix-turn-helix domains OSE4 Ovary Cell line GEO GSE37684 GPL10558 21900401 txt
shRNA ARID1A ARID domain factors Helix-turn-helix domains IOSE80pc Ovary Cell line GEO GSE37684 GPL10558 21900401 txt
shRNA ESRRA Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains HCT116 Colon Cell line GEO GSE38690 GPL10739 23720198 txt
shRNA TCF3 Basic helix-loop-helix factors (bHLH) Basic domains MDA-MB468 Mammary_
gland
Cell line GEO GSE38893 GPL6244 23090119 txt
shRNA BRD4 Others TcoF-DB_
TcoF
HEK293 Embryo_
kidney
Cell line GEO GSE39580 GPL6480 22897906 txt
shRNA NFYA Heteromeric CCAAT-binding factors Other all-alpha-helical DNA-binding domains HeLaS3 Cervix Cell line GEO GSE40215 GPL570 23595228 txt
shRNA ID1 Others Basic domains GSC2 Neuroepithelium Stem cell GEO GSE40614 GPL6883 27477274 txt
shRNA ID1 Others Basic domains GSC8 Neuroepithelium Stem cell GEO GSE40614 GPL6883 27477274 txt
shRNA SPDEF Tryptophan cluster factors Helix-turn-helix domains MCF7 Mammary_
gland
Cell line GEO GSE40985 GPL570 23764000 txt
shRNA IKZF2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains JURKAT Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE41796 GPL10332 23600753 txt
shRNA IKZF1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains JURKAT Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE41796 GPL10332 23600753 txt
shRNA SOX4 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains ACC3 Parotid_
gland
Cell line GEO GSE4225 GPL96 16636670 txt
shRNA ZFX C2H2 zinc finger factors Zinc-coordinating DNA-binding domains NOMO-1 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE43021 GPL6244 - txt
shRNA MYBL2 Tryptophan cluster factors Helix-turn-helix domains CD34+ BM cells Bone_marrow Primary cell GEO GSE43400 GPL15401 23878725 txt
shRNA TFAP2C Basic helix-span-helix factors (bHSH) Basic domains MCF7 Mammary_
gland
Cell line GEO GSE44203 GPL14951 - txt
shRNA TEAD4 TEA domain factors Helix-turn-helix domains SNU216 Stomach Cell line GEO GSE44383 GPL10558 24325916 txt
shRNA TAL1 Basic helix-loop-helix factors (bHLH) Basic domains ECFCs Umbilical_
cord_
blood
Primary cell GEO GSE44444 GPL6244 24792117 txt
shRNA STAT1 STAT domain factors Immunoglobulin fold JURKAT Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE44652 GPL570 23471820 txt
shRNA HSF1 Heat shock factors Helix-turn-helix domains A375 Skin Cell line GEO GSE44867 GPL570 23615731 txt
shRNA HIF1A Basic helix-loop-helix factors (bHLH) Basic domains HepG2 Liver Cell line GEO GSE44943 GPL6244 23649089 txt
shRNA ZFX C2H2 zinc finger factors Zinc-coordinating DNA-binding domains DAOY Central_
nervous_
system
Cell line GEO GSE45265 GPL6244 - txt
shRNA HMGA1 A.T hook factors beta-Sheet binding to DNA MDA-MB231 Mammary_
gland
Cell line GEO GSE45483 GPL5175 23658826 txt
shRNA ETV1 Tryptophan cluster factors Helix-turn-helix domains LNCaP Prostate Cell line GEO GSE46329 GPL6947 23817021 txt
shRNA HSF1 Heat shock factors Helix-turn-helix domains KYN2 Liver Cell line GEO GSE47693 GPL6884 - txt
shRNA ETV1 Tryptophan cluster factors Helix-turn-helix domains LNCaP Prostate Cell line GEO GSE47750 GPL10558 26731476 txt
shRNA TP63 p53 domain factors Immunoglobulin fold UC14 Bladder Cell line GEO GSE48124 GPL10558 24525232 txt
shRNA GABPA Tryptophan cluster factors Helix-turn-helix domains C4-2B Prostate Cell line GEO GSE49083 GPL10558 24753418 txt
shRNA GABPA Tryptophan cluster factors Helix-turn-helix domains LNCaP Prostate Cell line GEO GSE49083 GPL10558 24753418 txt
shRNA CREB1 Basic leucine zipper factors (bZIP) Basic domains H3118 MEC Parotid_
gland
Cell line GEO GSE49673 GPL570 26503699 txt
shRNA CREB1 Basic leucine zipper factors (bZIP) Basic domains HSY Parotid_
gland
Cell line GEO GSE49673 GPL570 26503699 txt
shRNA XBP1 Basic leucine zipper factors (bZIP) Basic domains T47D Mammary_
gland
Cell line GEO GSE49953 GPL570 24670641 txt
shRNA XBP1 Basic leucine zipper factors (bZIP) Basic domains MDA-MB231 Mammary_
gland
Cell line GEO GSE49953 GPL570 24670641 txt
shRNA HIC1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains HBL100 Mammary_
gland
Cell line GEO GSE50061 GPL17077 24295734 txt
shRNA MITF Basic helix-loop-helix factors (bHLH) Basic domains COLO829 Skin Cell line GEO GSE50649 GPL6244 24443471 txt
shRNA EGR3 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains M12 Prostate Cell line GEO GSE52108 GPL570 23342084 txt
shRNA SOX11 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains MCL Lymph Cell line GEO GSE52892 GPL570 25092176 txt
shRNA BCLAF1 Others TcoF-DB_
TF
RKO Colon Cell line GEO GSE52990 GPL570 25091051 txt
shRNA TAL1 Basic helix-loop-helix factors (bHLH) Basic domains HEL Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE54075 GPL13497 24874575 txt
shRNA PTEN Others TcoF-DB_
TcoF
MCF10A Mammary_
gland
Cell line GEO GSE54265 GPL6884 24553445 txt
shRNA ATM Others ENCODE_
TF
MCF10A Mammary_
gland
Cell line GEO GSE54268 GPL10558 24553445 txt
shRNA HIF1A Basic helix-loop-helix factors (bHLH) Basic domains HepG2 Liver Cell line GEO GSE54360 GPL6244 25489981 txt
shRNA KLF3 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE54437 GPL10558 - txt
shRNA HIF1A Basic helix-loop-helix factors (bHLH) Basic domains HuH7 Liver Cell line GEO GSE55212 GPL14951 25892225 txt
shRNA SNAI2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains Primary human keratinocytes Skin Primary cell GEO GSE55269 GPL570 25793155 txt
shRNA KLF2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains RPMI8226 Bone_marrow Cell line GEO GSE55667 GPL570 26728187 txt
shRNA IRX1 Others Helix-turn-helix domains 143B Bone_marrow Cell line GEO GSE55958 GPL15491 25822025 txt
shRNA JUN Basic leucine zipper factors (bZIP) Basic domains LP6 Soft_tissue Cell line GEO GSE57529 GPL5175 24852265 txt
shRNA MYC Basic helix-loop-helix factors (bHLH) Basic domains HT1080 Soft_tissue Cell line GEO GSE60558 GPL16686 25793315 txt
shRNA STAT5 STAT domain factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE61312 GPL6244 - txt
shRNA ARNT Basic helix-loop-helix factors (bHLH) Basic domains hESC HSF1 Embryo Stem cell GEO GSE61842 GPL570 25418722 txt
shRNA TAL1 Basic helix-loop-helix factors (bHLH) Basic domains HSPCs Bone_marrow Primary cell GEO GSE62634 GPL6244 - txt
shRNA TWIST1 Basic helix-loop-helix factors (bHLH) Basic domains CAF14 Stomach Tissue GEO GSE62738 GPL13607 25368021 txt
shRNA TWIST1 Basic helix-loop-helix factors (bHLH) Basic domains CAF32 Stomach Tissue GEO GSE62738 GPL13607 25368021 txt
shRNA TWIST1 Basic helix-loop-helix factors (bHLH) Basic domains CAF Stomach Tissue GEO GSE62740 GPL13607 25368021 txt
shRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains MDA Mammary_
gland
Cell line GEO GSE63562 GPL10558 25957686 txt
shRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains MDA-LM2 Mammary_
gland
Cell line GEO GSE63562 GPL10558 25957686 txt
shRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains MDA Mammary_
gland
Cell line GEO GSE63563 GPL10558 25957686 txt
shRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains MDA Mammary_
gland
Cell line GEO GSE63564 GPL10558 25957686 txt
shRNA YBX1 Cold-shock domain factors beta-Barrel DNA-binding domains MDA Mammary_
gland
Cell line GEO GSE63565 GPL10558 25957686 txt
shRNA SOX4 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains MDA-MB231 Mammary_
gland
Cell line GEO GSE63957 GPL10904 - txt
shRNA IRF4 Tryptophan cluster factors Helix-turn-helix domains BL2 Lymph Cell line GEO GSE64269 GPL18405 - txt
shRNA TLX1 Homeo domain factors Helix-turn-helix domains ALLSIL Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE65496 GPL570 27354269 txt
shRNA MYT1L C2HC zinc finger factors Zinc-coordinating DNA-binding domains SPC04 Fetal_
spinal_
cord
Cell line GEO GSE65857 GPL10558 28470180 txt
shRNA MEF2A MADS box factors alpha-Helices exposed by beta-structures SPC04 Fetal_
spinal_
cord
Cell line GEO GSE65857 GPL10558 28470180 txt
shRNA HES1 Basic helix-loop-helix factors (bHLH) Basic domains CUTLL1 Haematopoietic_
and_lymphoid_
tissue_
Blood
Cell line GEO GSE65872 GPL10558 25784680 txt
shRNA CREB1 Basic leucine zipper factors (bZIP) Basic domains JURKAT Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE68413 GPL10558 26008971 txt
shRNA CREB1 Basic leucine zipper factors (bZIP) Basic domains Molt4 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE68413 GPL10558 26008971 txt
shRNA CREB1 Basic leucine zipper factors (bZIP) Basic domains Nalm6 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE68413 GPL10558 26008971 txt
shRNA CREB1 Basic leucine zipper factors (bZIP) Basic domains RS4;11 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE68413 GPL10558 26008971 txt
shRNA PTEN Others TcoF-DB_
TcoF
A549 Lung Cell line GEO GSE68869 GPL10558 25995385 txt
shRNA SALL4 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains H661 Lung Cell line GEO GSE68959 GPL6244 27705911 txt
shRNA AR Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains CWR22Pc Prostate Cell line GEO GSE68993 GPL16686 - txt
shRNA STAT5 STAT domain factors Immunoglobulin fold CWR22Pc Prostate Cell line GEO GSE68993 GPL16686 - txt
shRNA ESRRA Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains 293T Embryo_
kidney
Cell line GEO GSE69661 GPL17077 - txt
shRNA TP53 p53 domain factors Immunoglobulin fold JVM2 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE70479 GPL10558 - txt
shRNA NFYA Heteromeric CCAAT-binding factors Other all-alpha-helical DNA-binding domains HCT1163 Colon Cell line GEO GSE70543 GPL17889 - txt
shRNA NFYA Heteromeric CCAAT-binding factors Other all-alpha-helical DNA-binding domains H322 Lung Cell line GEO GSE70543 GPL17889 - txt
shRNA GRHL2 Grainyhead domain factors Immunoglobulin fold OVCA429 Ovary Cell line GEO GSE71017 GPL16686 26887977 txt
shRNA POSTN Others Unclassified Structure GSC272 Brain Cell line GEO GSE73071 GPL570 27307601 txt
shRNA ARID1B ARID domain factors Helix-turn-helix domains IRM90 Liver Cell line GEO GSE75207 GPL6244 27737960 txt
shRNA PTEN Others TcoF-DB_
TcoF
A431 Skin Cell line GEO GSE7562 GPL570 17560336 txt
shRNA PTEN Others TcoF-DB_
TcoF
HCC827 Lung Cell line GEO GSE7562 GPL570 17560336 txt
shRNA PTEN Others TcoF-DB_
TcoF
SKBR3 Mammary_
gland
Cell line GEO GSE7562 GPL570 17560336 txt
shRNA HOXA5 Homeo domain factors Helix-turn-helix domains MCF10A Mammary_
gland
Cell line GEO GSE75840 GPL10558 - txt
shRNA NR2E1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains PBT003 Neuroepithelium Primary cell GEO GSE75945 GPL15207 26838672 txt
shRNA ARNT Basic helix-loop-helix factors (bHLH) Basic domains WA09/H9 Embryo Stem cell GEO GSE76090 GPL10558 - txt
shRNA RUNX1 Runt domain factors Immunoglobulin fold H9 Embryo Stem cell GEO GSE79598 GPL17586 27720906 txt
shRNA ARNT Basic helix-loop-helix factors (bHLH) Basic domains CTB Placenta_
tissue
Primary cell GEO GSE80995 GPL10558 28167044 txt
shRNA ELK3 Tryptophan cluster factors Helix-turn-helix domains MDA-MB231 Mammary_
gland
Cell line GEO GSE83325 GPL15207 - txt
shRNA HNF4G Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains 22RV1 Prostate Cell line GEO GSE85242 GPL10558 - txt
shRNA FOXO1 Fork head / winged helix factors Helix-turn-helix domains RS4;11 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE86066 GPL6244 - txt
shRNA FOXO1 Fork head / winged helix factors Helix-turn-helix domains 018Z Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE86066 GPL6244 - txt
shRNA AR Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains CWR22Rv1 Prostate Cell line GEO GSE86547 GPL16686 28416760 txt
shRNA TP63 p53 domain factors Immunoglobulin fold HaCaT Immortalized_
keratinocyte
Cell line GEO GSE88832 GPL6244 28041841 txt
shRNA TP63 p53 domain factors Immunoglobulin fold JHU-029 Head_and_
neck
Cell line GEO GSE88833 GPL6244 28041841 txt
shRNA TP63 p53 domain factors Immunoglobulin fold FaDU Head_and_
neck
Cell line GEO GSE88833 GPL6244 28041841 txt
shRNA TP63 p53 domain factors Immunoglobulin fold HaCaT Immortalized_
keratinocyte
Cell line GEO GSE88861 GPL6244 28041841 txt
shRNA TP63 p53 domain factors Immunoglobulin fold JHU-029 Head_and_
neck
Cell line GEO GSE88861 GPL6244 28041841 txt
shRNA TP63 p53 domain factors Immunoglobulin fold FaDU Head_and_
neck
Cell line GEO GSE88861 GPL6244 28041841 txt
shRNA TOX Others Other all-alpha-helical DNA-binding domains CCRF-CEM Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE89607 GPL16686 - txt
shRNA TOX Others Other all-alpha-helical DNA-binding domains HPB-ALL Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE89607 GPL16686 - txt
shRNA RUNX1 Runt domain factors Immunoglobulin fold MV4-11 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE94835 GPL17692 - txt
shRNA RUNX1 Runt domain factors Immunoglobulin fold MV4-11 Haematopoietic_
and_lymphoid_
tissue
Cell line GEO GSE98748 GPL17692 - txt
shRNA ARID1A ARID domain factors Helix-turn-helix domains iEEC16 Uterus Cell line GEO GSE86572 GPL10558 - txt
shRNA TCF7L1 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains HCT116 Colon Cell line GEO GSE92446 GPL10558 28450117 txt
shRNA SOX2 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains HF2303 Neuroepithelium Primary cell GEO GSE51441 GPL10558 24726753 txt
shRNA ETV4 Tryptophan cluster factors Helix-turn-helix domains PC3 Prostate Cell line GEO GSE21209 GPL4133 21373373 txt
shRNA PAX3 Paired box factors Helix-turn-helix domains Rh30 Soft_tissue Cell line GEO GSE35862 GPL6480 22533991 txt
shRNA RUNX2 Runt domain factors Immunoglobulin fold SKOV3 Ovary Cell line GEO GSE46477 GPL4133 24124450 txt
shRNA GRHL2 Grainyhead domain factors Immunoglobulin fold SKOV3 Ovary Cell line GEO GSE90132 GPL4133 28278050 txt
shRNA CCAR2 Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR237IWZ - - txt
shRNA RBM15 Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR599PXD - 22955616 txt
shRNA ILF2 Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR366FFV - 22955616 txt
shRNA SRSF7 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR017PRS - 22955616 txt
shRNA SRSF9 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR597XHH - 22955616 txt
shRNA HNRNPK Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR853ZJS - 22955616 txt
shRNA RBM22 Others TcoF-DB_
TF
HepG2 Liver Cell line ENCODE ENCSR330KHN - - txt
shRNA NONO NonO domain factors Yet undefined DNA-binding domains HepG2 Liver Cell line ENCODE ENCSR647NYX - 22955616 txt
shRNA ILF3 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR942MBU - 22955616 txt
shRNA AGO1 Others TcoF-DB_
TcoF
HepG2 Liver Cell line ENCODE ENCSR533HXS - 22955616 txt
shRNA HNRNPL Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR155BMF - 22955616 txt
shRNA U2AF1 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR372UWV - 22955616 txt
shRNA YBX3 Cold-shock domain factors beta-Barrel DNA-binding domains HepG2 Liver Cell line ENCODE ENCSR494VSD - - txt
shRNA PSIP1 Others TcoF-DB_
TcoF
HepG2 Liver Cell line ENCODE ENCSR744YVR - 22955616 txt
shRNA RBM17 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR385TMY - 22955616 txt
shRNA RBFOX2 Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR767LLP - 22955616 txt
shRNA SAFB2 Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR110ZYD - 22955616 txt
shRNA FIP1L1 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR116QBU - 22955616 txt
shRNA HDGF Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR634KHL - 22955616 txt
shRNA U2AF2 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR426UUG - 22955616 txt
shRNA TAF15 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR998RZI - 22955616 txt
shRNA SSB Others Unclassified Structure HepG2 Liver Cell line ENCODE ENCSR278CHI - - txt
shRNA ZNF622 Others Zinc-coordinating DNA-binding domains HepG2 Liver Cell line ENCODE ENCSR518JXY - - txt
shRNA HNRNPUL1 Others TcoF-DB_
TcoF
HepG2 Liver Cell line ENCODE ENCSR689ZJC - 22955616 txt
shRNA GTF2F1 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR295XKC - - txt
shRNA RBM39 Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR760EGM - 22955616 txt
shRNA BCLAF1 Others TcoF-DB_
TF
HepG2 Liver Cell line ENCODE ENCSR481AYC - 22955616 txt
shRNA U2AF2 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR622MCX - 22955616 txt
shRNA XRCC5 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR732IYM - 22955616 txt
shRNA PCBP1 Others TcoF-DB_
TF
HepG2 Liver Cell line ENCODE ENCSR635FRH - 22955616 txt
shRNA TARDBP Others TcoF-DB_
TcoF
HepG2 Liver Cell line ENCODE ENCSR527QNC - 22955616 txt
shRNA SUB1 Others TcoF-DB_
TcoF
HepG2 Liver Cell line ENCODE ENCSR997FOT - 22955616 txt
shRNA CEBPZ Others TcoF-DB_
TF
HepG2 Liver Cell line ENCODE ENCSR929PXS - 22955616 txt
shRNA RBM25 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR610AEI - 22955616 txt
shRNA PTBP1 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR064DXG - 22955616 txt
shRNA RBM34 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR318HAT - 22955616 txt
shRNA EWSR1 Others TcoF-DB_
TcoF
HepG2 Liver Cell line ENCODE ENCSR532ZPP - 22955616 txt
shRNA PCBP2 Others TcoF-DB_
TF
HepG2 Liver Cell line ENCODE ENCSR028ITN - 22955616 txt
shRNA FUS Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR927JXU - 22955616 txt
shRNA HNRNPLL Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR490DYI - 22955616 txt
shRNA SNRNP70 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR635BOO - 22955616 txt
shRNA SRSF3 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR376FGR - 22955616 txt
shRNA PRPF4 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR215FRI - - txt
shRNA TARDBP Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR455TNF - 22955616 txt
shRNA POLR2G Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR936TED - 22955616 txt
shRNA PTBP1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR527IVX - 22955616 txt
shRNA AGO2 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR495YSS - 22955616 txt
shRNA SRSF7 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR464ADT - 22955616 txt
shRNA SRSF9 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR113HRG - 22955616 txt
shRNA PCBP2 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR648QFY - 22955616 txt
shRNA HNRNPK Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR529JNJ - 22955616 txt
shRNA PCBP1 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR545AIK - 22955616 txt
shRNA RBM17 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR898OPN - 22955616 txt
shRNA RBFOX2 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR336DFS - 22955616 txt
shRNA TAF15 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR031RZS - 22955616 txt
shRNA RBM34 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR560AYQ - 22955616 txt
shRNA BCLAF1 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR410ZPU - 22955616 txt
shRNA RBM15 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR385UPQ - 22955616 txt
shRNA PTBP1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR239BCO - 22955616 txt
shRNA DROSHA Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR624XHG - 22955616 txt
shRNA CCAR2 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR984CLJ - 22955616 txt
shRNA FIP1L1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR511BNY - 22955616 txt
shRNA ILF3 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR269HQA - 22955616 txt
shRNA NONO NonO domain factors Yet undefined DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR398HXV - 22955616 txt
shRNA SAFB2 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR770LYW - 22955616 txt
shRNA RBM39 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR678WOA - 22955616 txt
shRNA ILF2 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR126ARZ - 22955616 txt
shRNA YBX3 Cold-shock domain factors beta-Barrel DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR306EIU - 22955616 txt
shRNA SRSF4 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR697GLD - 22955616 txt
shRNA FUS Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR325OOM - 22955616 txt
shRNA HNRNPUL1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR034VBA - 22955616 txt
shRNA GTF2F1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR188IPO - 22955616 txt
shRNA PSIP1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR611LQB - 22955616 txt
shRNA XRCC5 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR715XZS - 22955616 txt
shRNA HNRNPL Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR563YIS - 22955616 txt
shRNA SUB1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR047AJA - 22955616 txt
shRNA AGO1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR268JDD - 22955616 txt
shRNA TAF15 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR611ZAL - 22955616 txt
shRNA SSB Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR891AXF - 22955616 txt
shRNA U2AF1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR342EDG - 22955616 txt
shRNA RBM25 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR149DMY - 22955616 txt
shRNA EWSR1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR831YGP - 22955616 txt
shRNA RBM22 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR947OIM - 22955616 txt
shRNA TARDBP Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR134JRE - 22955616 txt
shRNA U2AF2 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR904CJQ - 22955616 txt
shRNA RBM15 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR627NVU - 22955616 txt
esiRNA BACH1 Basic leucine zipper factors (bZIP) Basic domains HEK293T Embryo_
kidney
Cell line GEO GSE28050 GPL570 21555518 txt
CRISPRko GRHL2 Grainyhead domain factors Immunoglobulin fold A2780s Ovary Cell line GEO GSE90132 GPL4133 28278050 txt
CRISPRi DPF2 Others Chromatin Remodeling Factors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR028FBD - 22955616 txt
CRISPRi HOXB9 Homeo domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR810RIC - 22955616 txt
CRISPRi JUND Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR389OCD - 22955616 txt
CRISPRi BACH1 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR190RZZ - 22955616 txt
CRISPRi STAT2 STAT domain factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR469EFL - 22955616 txt
CRISPRi NR2F2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR688UTN - 22955616 txt
CRISPRi HMGN2 Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR243VNX - 22955616 txt
CRISPRi SRF MADS box factors alpha-Helices exposed by beta-structures K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR084NTT - 22955616 txt
CRISPRi NFATC1 Rel homology region (RHR) factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR381TNV - 22955616 txt
CRISPRi STAT1 STAT domain factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR184VVN - 22955616 txt
CRISPRi NFYB Heteromeric CCAAT-binding factors Other all-alpha-helical DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR171KMM - 22955616 txt
CRISPRi USF2 Basic helix-loop-helix factors (bHLH) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR052BWT - 22955616 txt
CRISPRi USF1 Basic helix-loop-helix factors (bHLH) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR545HTM - 22955616 txt
CRISPRi ZNF384 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR103URL - 22955616 txt
CRISPRi GATA2 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR557BMX - 22955616 txt
CRISPRi KLF2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR620DOP - 22955616 txt
CRISPRi MEIS2 Homeo domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR733TFF - 22955616 txt
CRISPRi FOXK2 Fork head / winged helix factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR773VKE - 22955616 txt
CRISPRi NFE2L1 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR385ZTW - 22955616 txt
CRISPRi TEAD2 TEA domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR074FBG - 22955616 txt
CRISPRi ERF Tryptophan cluster factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR268DNJ - 22955616 txt
CRISPRi LDB1 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR046FQX - 22955616 txt
CRISPRi HINFP C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR713AEC - 22955616 txt
CRISPRi FOXM1 Fork head / winged helix factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR701TVL - 22955616 txt
CRISPRi CITED2 Others Co-activator/repressors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR200UDS - 22955616 txt
CRISPRi RELA Rel homology region (RHR) factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR052ZPX - 22955616 txt
CRISPRi TEAD4 TEA domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR550FIL - 22955616 txt
CRISPRi CTBP1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR171RTN - 22955616 txt
CRISPRi SP2 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR715EDZ - 22955616 txt
CRISPRi TBL1XR1 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR800PWS - 22955616 txt
CRISPRi ZC3H11A Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR911BML - 22955616 txt
CRISPRi HMGN3 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR160YSN - 22955616 txt
CRISPRi THAP1 C2CH THAP-type zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR294ZCD - 22955616 txt
CRISPRi SMARCA4 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR126GEQ - 22955616 txt
CRISPRi SMAD5 SMAD/NF-1 DNA-binding domain factors beta-Hairpin exposed by an alpha/beta-scaffold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR731FEO - 22955616 txt
CRISPRi SNW1 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR409OFU - 22955616 txt
CRISPRi ARID3A ARID domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR898UNK - 22955616 txt
CRISPRi HDAC8 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR369BHC - 22955616 txt
CRISPRi SETDB1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR819PCU - 22955616 txt
CRISPRi TLE2 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR399QAP - 22955616 txt
CRISPRi ATF3 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR123IMQ - 22955616 txt
CRISPRi DLX1 Homeo domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR862UHT - 22955616 txt
CRISPRi UBTF High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR608ORR - 22955616 txt
CRISPRi STAT6 STAT domain factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR024HAR - 22955616 txt
CRISPRi HMBOX1 Homeo domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR942XXL - 22955616 txt
CRISPRi ZNF143 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR781XJD - 22955616 txt
CRISPRi GATA1 Other C4 zinc finger-type factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR850LOZ - 22955616 txt
CRISPRi RFX5 Fork head / winged helix factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR619EYC - 22955616 txt
CRISPRi NRF1 Basic leucine zipper factors (bZIP) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR299HUJ - 22955616 txt
CRISPRi TRIM28 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR591QYK - 22955616 txt
CRISPRi HOXB4 Homeo domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR359VJC - - txt
CRISPRi NONO NonO domain factors Yet undefined DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR039VEQ - 22955616 txt
CRISPRi WHSC1 High-mobility group (HMG) domain factors Other all-alpha-helical DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR181WYS - 22955616 txt
CRISPRi SP1 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR650QAK - 22955616 txt
CRISPRi RNF2 Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR043UMW - 22955616 txt
CRISPRi ZNF395 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR267BHU - 22955616 txt
CRISPRi ILF2 Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR073QLQ - 22955616 txt
CRISPRi TFDP1 Fork head / winged helix factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR552HTC - 22955616 txt
CRISPRi STAT5A STAT domain factors Immunoglobulin fold K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR376CFR - 22955616 txt
CRISPRi HSF1 Heat shock factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR734VBC - 22955616 txt
CRISPRi RBBP7 Others Chromatin Remodeling Factors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR235ZEI - 22955616 txt
CRISPRi HMGA1 A.T hook factors beta-Sheet binding to DNA K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR069OUL - 22955616 txt
CRISPRi NFYA Heteromeric CCAAT-binding factors Other all-alpha-helical DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR096VPS - 22955616 txt
CRISPRi NR2C2 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR808HQN - 22955616 txt
CRISPRi SIX5 Homeo domain factors Helix-turn-helix domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR104QKG - 22955616 txt
CRISPRi HMGN1 Others Unclassified Structure K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR011GAO - 22955616 txt
CRISPRi TARDBP Others TcoF-DB_
TcoF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR731XIE - 22955616 txt
CRISPRi MAF1 Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR733ROU - 22955616 txt
CRISPRi ZBTB33 C2H2 zinc finger factors Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR223QTD - 22955616 txt
CRISPRi MXD3 Basic helix-loop-helix factors (bHLH) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR104JMN - 22955616 txt
CRISPRi NR4A1 Nuclear receptors with C4 zinc fingers Zinc-coordinating DNA-binding domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR357LVC - 22955616 txt
CRISPRi MITF Basic helix-loop-helix factors (bHLH) Basic domains K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR905SEH - - txt
CRISPRedit DROSHA Others Unclassified Structure HepG2 Liver Cell line ENCODE ENCSR991XFO - - txt
CRISPRedit SRSF7 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR845MNM - - txt
CRISPRedit RBM14 Others Other Cofactors HepG2 Liver Cell line ENCODE ENCSR166MWM - - txt
CRISPRedit SRSF4 Others ENCODE_
TF
HepG2 Liver Cell line ENCODE ENCSR471INA - - txt
CRISPRedit CEBPZ Others TcoF-DB_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR637EFF - - txt
CRISPRedit SRSF7 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR139LOF - - txt
CRISPRedit PTBP1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR415DJT - - txt
CRISPRedit HNRNPH1 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR354RSR - - txt
CRISPRedit POLR2G Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR580TGX - - txt
CRISPRedit SYNCRIP Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR680OJB - - txt
CRISPRedit SAFB Others Other Cofactors K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR336TYW - - txt
CRISPRedit SRSF4 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR905NIK - - txt
CRISPRedit SRSF9 Others ENCODE_
TF
K562 Haematopoietic_
and_lymphoid_
tissue
Cell line ENCODE ENCSR972AZD - 22955616 txt

Download Differentially Expressed Genes of All Datasets

Differential Expression of Genes: txt

Download Promoter, SE and TE Information of Each Gene

Promoter: txt Promoter_Motif: txt
Super-Enhancer: txt SE_Motif: txt
Typical Enhancer: txt TE_Motif: txt
TF ChIP-seq: txt