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SE, SE element and TE for each sample

Species Biosample type Tissue type Biosample name SE SE element TE
Arabidopsis thaliana Tissue Cotyledons cotyledons_2-week-old_wt TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Cotyledons cotyledons_2-week-old_atxr5/6_(W) TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Seedlings Col-0_acc1-5_acla-1i-1_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Seedlings Col-0_acc1-5_acla-1i_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Seedlings Col-0_acc1-5_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Seedlings Col-0_WT_seedlings_12_days_after_germination TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Inflorescence inflorescence_pAP1::AP1-GRap1cal_stage_2_of_flower_development TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Inflorescence inflorescence_pAP1::AP1-GRap1cal_stage_4-5_of_flower_development TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Root epidermal Non-hair_cell_nuclei_from_root_epidermal_tissue TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Young shoots Col-0_young_shoots_from_two-week_old_seedlings_wt TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Young shoots young_shoots_from_two-week_old_seedlings_ddcc TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Young shoots young_shoots_from_two-week_old_seedlings_met1-3 TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Mature leaves Col-0_mature_leaves_from_five-week_old_wt TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Mature leaves mature_leaves_from_five-week_old_ddcc TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Mature leaves mature_leaves_from_five-week_old_met1-3 TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Mature leaves mature_leaves_from_five-week_old_mddcc TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Sperm nuclei Col-0_Sperm_nuclei_wt TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Root Col-0_3D-Root-Dis_1_year(s) TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Root Col-0_3D-Root-Pro_2_year(s) TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Root Col-0_7D-Root-Dis_1_year(s) TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Tissue Root Col-0_7D-Root-Pro_1_year(s) TAIR10 TAIR10 TAIR10

SE, SE element and TE for each tissue

Species Tissue type SE SE element TE Gene TF Sample infomation
Arabidopsis thaliana Cotyledons TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Seedlings TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Inflorescence TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Root epidermal TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Young shoots TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Mature leaves TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Sperm nuclei TAIR10 TAIR10 TAIR10
Arabidopsis thaliana Root TAIR10 TAIR10 TAIR10

Annotation

TF ChIP-seq: DHS:
Conserved regions: Histone modification:

Package of SE, SE element and TE

Arabidopsis thaliana Super-enhancer: bed     csv
Arabidopsis thaliana Super-enhancer element: bed     csv
Arabidopsis thaliana Typical enhancer: bed     csv