SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000170855
Gene: TRIAP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:120443964-120446384 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_003200148 chr12:120316026-120414663 Sample_02_0032 Pancreas pancreatic-islets-M 148 20 2476 239 6 414 2209 PLA2G1B,MSI1,GATC,TRIAP1,SIRT4,COX6A1
SE_01_009500130 chr12:120341251-120414658 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 130 17 1862 180 3 383 1884 MSI1,SIRT4,RNU4-1,COX6A1,TRIAP1,PLA2G1B,GATC,RNU4-2
SE_02_101700254 chr12:120341811-120414749 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 254 13 1854 179 3 380 1807 MSI1,SIRT4,RNU4-1,COX6A1,TRIAP1,PLA2G1B,GATC,RNU4-2
SE_02_003300758 chr12:120350443-120430962 Sample_02_0033 Pancreas pancreatic-islets-F 758 12 2034 211 1 338 1076 MSI1,GATC,SIRT4,SRSF9,TRIAP1,PLA2G1B,DYNLL1,COX6A1
SE_02_077500029 chr12:120351680-120435010 Sample_02_0775 Pancreas EndoC-BH1_SE 29 47 2089 224 1 328 967 MSI1,SIRT4,DYNLL1,GATC,COX6A1,SRSF9,TRIAP1,PLA2G1B
SE_02_097200147 chr12:120355905-120414652 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 147 12 1494 137 1 306 855 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_096300243 chr12:120356198-120414833 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 243 7 1496 137 1 304 855 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_108200201 chr12:120356504-120414763 Sample_02_1082 Retina retina 201 14 1488 137 1 304 855 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_059400694 chr12:120356656-120414666 Sample_02_0594 iPSC-derived neural progenitors 694 8 1484 137 1 304 855 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC,SIRT4
SE_02_108300184 chr12:120356681-120407457 Sample_02_1083 Macula macula 184 12 1273 114 1 295 855 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_101600184 chr12:120356843-120414586 Sample_02_1016 Embryo H9_Mesendoderm_24h 184 11 1482 137 1 304 816 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_085700587 chr12:120356957-120415009 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 587 11 1486 136 1 298 798 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_003900288 chr12:120358135-120414774 Sample_02_0039 Embryo AFG 288 10 1444 136 1 291 697 MSI1,GATC,PLA2G1B,COX6A1,TRIAP1
SE_02_101500218 chr12:120358434-120416805 Sample_02_1015 Embryo H9_ Undifferentiated 218 11 1487 139 1 291 697 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_052400301 chr12:120358541-120398294 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 301 12 979 88 1 254 697 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_004000531 chr12:120358554-120414978 Sample_02_0040 Embryo PFG 531 9 1440 134 1 291 697 MSI1,GATC,PLA2G1B,COX6A1,TRIAP1
SE_02_049400287 chr12:120360904-120399126 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 287 8 945 82 1 246 603 MSI1,TRIAP1,PLA2G1B,COX6A1,GATC
SE_02_093200085 chr12:120388347-120429105 Sample_02_0932 Embryo H9 WT_1 85 10 1062 124 0 84 0 DYNLL1,GATC,MSI1,COX6A1,SRSF9,TRIAP1,PLA2G1B
SE_02_003601184 chr12:120388360-120414808 Sample_02_0036 Embryo H7 1184 5 697 65 0 77 0 GATC,MSI1,COX6A1,TRIAP1
SE_00_001000404 chr12:120388361-120414866 Sample_00_0010 Embryo endodermal-cell 404 5 700 65 0 77 0 GATC,MSI1,COX6A1,TRIAP1
SE_02_001800519 chr12:120388380-120414856 Sample_02_0018 Embryo NEC 519 5 699 65 0 77 0 GATC,MSI1,COX6A1,TRIAP1
SE_00_001200392 chr12:120388429-120414818 Sample_00_0012 Embryo H1-hESC 392 4 696 65 0 77 0 GATC,MSI1,COX6A1,TRIAP1
SE_02_093100173 chr12:120388442-120416834 Sample_02_0931 Embryo H9 UTXKO 173 12 746 70 0 77 0 MSI1,TRIAP1,COX6A1,GATC,PLA2G1B
SE_02_067900280 chr12:120388466-120414283 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 280 9 684 65 0 77 0 MSI1,TRIAP1,COX6A1,GATC,SIRT4
SE_02_027600336 chr12:120388475-120414758 Sample_02_0276 Retina FW15 336 5 693 65 0 77 0 GATC,MSI1,COX6A1,TRIAP1
SE_02_157001176 chr12:120388528-120414800 Sample_02_1570 iPSCs EiPSC 1176 4 692 64 0 77 0 MSI1,TRIAP1,COX6A1,GATC
SE_02_001900696 chr12:120388561-120414833 Sample_02_0019 Embryo Neural crest cells 696 5 692 64 0 76 0 GATC,MSI1,COX6A1,TRIAP1
SE_02_093400087 chr12:120388563-120416327 Sample_02_0934 Embryo H7-WT 87 8 724 68 0 76 0 MSI1,TRIAP1,COX6A1,GATC
SE_00_004800188 chr12:120388610-120414600 Sample_00_0048 Embryo neuronal stem cell originated from H1 188 7 683 64 0 76 0 MSI1,TRIAP1,COX6A1,GATC
SE_02_093300153 chr12:120388659-120414717 Sample_02_0933 Embryo H7 UTXKO 153 7 687 64 0 76 0 MSI1,TRIAP1,COX6A1,GATC
SE_02_068100482 chr12:120388732-120398252 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 482 7 228 17 0 35 0 MSI1,TRIAP1,COX6A1,GATC,SIRT4
SE_02_083800483 chr12:120388757-120414115 Sample_02_0838 Embryo hNPCs_WT 483 6 673 64 0 68 0 MSI1,TRIAP1,COX6A1,GATC,SIRT4
SE_02_055901007 chr12:120388761-120414446 Sample_02_0559 iPSCs FX52 iPSCs dC-T 1007 4 679 64 0 76 0 MSI1,TRIAP1,COX6A1,GATC
SE_02_138400599 chr12:120388811-120416562 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 599 10 730 68 0 76 0 MSI1,TRIAP1,COX6A1,GATC
SE_02_041700311 chr12:120388925-120402402 Sample_02_0417 Embryo H9_Null 311 3 352 28 0 61 0 GATC,MSI1,COX6A1,TRIAP1
SE_02_104701929 chr12:120448277-120483074 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1929 11 943 113 2 66 1029 GATC,SRSF9,DYNLL1,COX6A1,COQ5,NRAV,TRIAP1
SE_02_109200592 chr12:120458739-120480793 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 592 7 585 74 0 60 912 GATC,SRSF9,DYNLL1,COX6A1,COQ5,NRAV,TRIAP1
SE_02_146001205 chr12:120459671-120484181 Sample_02_1460 Blood Mutz-3 1205 5 629 85 0 60 912 GATC,SRSF9,DYNLL1,COX6A1,COQ5,NRAV,TRIAP1
SE_02_103501178 chr12:120467279-120488875 Sample_02_1035 Mammary gland HCC70_Vehicle 1178 6 551 78 0 28 252 SRSF9,DYNLL1,GATC,COX6A1,RNF10,COQ5,NRAV,TRIAP1
SE_02_010500685 chr12:120467891-120500412 Sample_02_0105 Skin neonatal_keratinocytes 685 4 834 118 0 93 874 DYNLL1,SRSF9,GATC,RNF10,COQ5,TRIAP1,COX6A1
SE_02_062300240 chr12:120467991-120480516 Sample_02_0623 Mammary gland TAMR_E2 240 3 325 44 0 28 252 SRSF9,DYNLL1,GATC,COX6A1,COQ5,NRAV,TRIAP1
SE_02_062400201 chr12:120467999-120480816 Sample_02_0624 Mammary gland TAMR_VEH 201 4 331 45 0 28 252 SRSF9,DYNLL1,GATC,COX6A1,COQ5,NRAV,TRIAP1
SE_02_097900883 chr12:120473653-120499288 Sample_02_0979 Brain JN14-BS1_H3.3K27M 883 11 652 88 0 73 622 NRAV,DYNLL1,GATC,COX6A1,RNF10,COQ5,SRSF9,TRIAP1
SE_02_146500302 chr12:120474013-120501335 Sample_02_1465 Ovary CAOV4cis 302 6 698 95 0 75 622 NRAV,DYNLL1,GATC,COX6A1,RNF10,COQ5,SRSF9,TRIAP1
Genomic distribution of SEs associated with TRIAP1
Genome Browser

The strength of the tissue affected by the gene

Expression of TRIAP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)