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Super-enhancer overview

SE ID: SE_01_009500130
Species: Human
Data source: ENCODE
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: neuroepithelial stem cell stably expressing HES5 originated from H9
Genomic region: chr12:120341251-120414658
Size: 73407
Super-enhancer rank 130
Number of SE elements: 17
ChIP density(Case|Control): 35316.1077|7531.5582
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MSI1;
ROSE Overlap MSI1;
ROSE Proximal SIRT4; RNU4-1; COX6A1; TRIAP1; PLA2G1B; GATC; RNU4-2;
ROSE Closest MSI1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_009500130 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers