Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000057704 |
| Gene: | TMCC3 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr12:94567122-94650557 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_071500476 | chr12:94617592-94623615 |
Sample_02_0715 | Pancreas | SUIT2_TP63dN | 476 | 4 | 170 | 4 | 1 | 22 | 0 | TMCC3,MIR7844 |
| SE_02_137000417 | chr12:94618259-94624679 |
Sample_02_1370 | Pancreas | Patu8902-untreated | 417 | 4 | 183 | 5 | 1 | 21 | 0 | TMCC3,MIR7844 |
| SE_02_094901031 | chr12:94618619-94650519 |
Sample_02_0949 | Umbilical artery | HUAEC_WT | 1031 | 16 | 926 | 66 | 3 | 115 | 100 | TMCC3,MIR7844 |
| SE_02_092800226 | chr12:94621422-94657237 |
Sample_02_0928 | Peripheral blood | neutrophils_Ecoli | 226 | 4 | 999 | 76 | 3 | 122 | 176 | TMCC3,CEP83 |
| SE_02_126700904 | chr12:94636339-94645608 |
Sample_02_1267 | Bone | Im-GCT-4072_G34W | 904 | 8 | 260 | 20 | 0 | 23 | 0 | TMCC3 |
| SE_02_153000623 | chr12:94636911-94656289 |
Sample_02_1530 | Peripheral blood | neutrophils_0BA0X | 623 | 6 | 518 | 45 | 0 | 71 | 176 | TMCC3,CEP83 |
| SE_02_152900270 | chr12:94638272-94682604 |
Sample_02_1529 | Peripheral blood | neutrophils_0BC75 | 270 | 7 | 1175 | 89 | 3 | 129 | 176 | TMCC3,CEP83 |
| SE_02_048101989 | chr12:94638975-94657600 |
Sample_02_0481 | Mammary gland | MDA-MB231 | 1989 | 3 | 493 | 41 | 0 | 58 | 176 | TMCC3 |
| SE_02_122700893 | chr12:94639258-94653360 |
Sample_02_1227 | Bone marrow | U266 | 893 | 6 | 387 | 34 | 0 | 57 | 176 | TMCC3 |
| SE_02_065201358 | chr12:94640313-94661104 |
Sample_02_0652 | Tracheobronchial epithelial | HTBE_H3N2_mock | 1358 | 6 | 544 | 41 | 0 | 61 | 176 | TMCC3 |
| SE_02_092901066 | chr12:94640416-94689618 |
Sample_02_0929 | Mid-gestation placenta | trophoblast__CytT | 1066 | 22 | 1396 | 93 | 5 | 129 | 176 | TMCC3 |
| SE_02_137000518 | chr12:94643759-94650589 |
Sample_02_1370 | Pancreas | Patu8902-untreated | 518 | 6 | 181 | 16 | 0 | 45 | 115 | TMCC3 |
| SE_02_131400279 | chr12:94663183-94684411 |
Sample_02_1314 | Brain | hMGLs_TREM2-KO | 279 | 6 | 645 | 38 | 3 | 52 | 0 | TMCC3 |
| SE_02_131800282 | chr12:94663330-94684245 |
Sample_02_1318 | Brain | hMGLs_SORL1-A528T | 282 | 5 | 635 | 38 | 3 | 52 | 0 | TMCC3 |
| SE_02_131600457 | chr12:94663338-94689186 |
Sample_02_1316 | Brain | hMGLs_TREM2-R47H | 457 | 7 | 786 | 41 | 3 | 58 | 0 | TMCC3 |
| SE_02_131500399 | chr12:94663969-94690424 |
Sample_02_1315 | Brain | hMGLs_INPP5D SNP | 399 | 8 | 807 | 45 | 5 | 64 | 0 | TMCC3 |
| SE_02_013900013 | chr12:94669290-94784233 |
Sample_02_0139 | Liver | RT236 | 13 | 15 | 3476 | 174 | 19 | 231 | 0 | TMCC3 |
| SE_02_083101021 | chr12:94670812-94725909 |
Sample_02_0831 | Umblical vein | HUVECs_TNF0min | 1021 | 19 | 1725 | 113 | 6 | 125 | 0 | TMCC3 |
| SE_02_094900583 | chr12:94670941-94725927 |
Sample_02_0949 | Umbilical artery | HUAEC_WT | 583 | 23 | 1726 | 113 | 6 | 125 | 0 | TMCC3 |
| SE_02_095001332 | chr12:94673486-94725927 |
Sample_02_0950 | Umbilical vein | HUVEC_WT | 1332 | 21 | 1669 | 108 | 4 | 102 | 0 | TMCC3 |
| SE_02_131300567 | chr12:94673930-94684209 |
Sample_02_1313 | Brain | hMGLs_CD33_SNP | 567 | 7 | 343 | 14 | 1 | 9 | 0 | TMCC3 |
| SE_02_131700349 | chr12:94673978-94684279 |
Sample_02_1317 | Brain | hMGLs_SORL1-KO | 349 | 4 | 343 | 14 | 1 | 8 | 0 | TMCC3 |
| SE_02_131200447 | chr12:94674763-94683658 |
Sample_02_1312 | Brain | hMGLs_WT | 447 | 3 | 297 | 12 | 1 | 5 | 0 | TMCC3 |
| SE_02_003300313 | chr12:94689094-94772977 |
Sample_02_0033 | Pancreas | pancreatic-islets-F | 313 | 15 | 2569 | 144 | 14 | 165 | 0 | TMCC3 |
| SE_02_004700233 | chr12:94689503-94772879 |
Sample_02_0047 | Pancreatic endoderm | IIDP/donor790 | 233 | 21 | 2559 | 142 | 14 | 163 | 0 | TMCC3 |
| SE_02_077500393 | chr12:94699026-94773719 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 393 | 29 | 2274 | 114 | 12 | 147 | 0 | TMCC3 |
Genomic distribution of SEs associated with TMCC3