SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000136206
Gene: SPDYE1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:43997897-44010122 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_154100450 chr7:43962238-43993267 Sample_02_1541 Nasopharyngeal HNE1 450 17 727 93 0 0 959 POLR2J4,UBE2D4,LINC00957,SPDYE1,URGCP,RASA4CP
SE_02_103200497 chr7:43963252-43997451 Sample_02_1032 Head and neck SCC1 JQ1 497 17 791 105 0 0 954 POLR2J4,UBE2D4,LINC00957,SPDYE1,DBNL,URGCP,RASA4CP
SE_02_103100443 chr7:43964273-43994710 Sample_02_1031 Head and neck SCC1 contol 443 15 714 87 0 0 954 POLR2J4,UBE2D4,LINC00957,SPDYE1,DBNL,URGCP,RASA4CP
SE_02_088600692 chr7:43964619-43998971 Sample_02_0886 Skin foreskin_ p63KLF4 692 11 782 104 0 0 979 POLR2J4,UBE2D4,LINC00957,SPDYE1,DBNL,URGCP,RASA4CP
SE_02_138000568 chr7:43967498-43972613 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 568 3 106 14 0 0 171 POLR2J4,SPDYE1,UBE2D4,URGCP
SE_02_113100236 chr7:43967556-43997740 Sample_02_1131 Pancreas T3M4 wt 236 16 689 89 0 0 721 POLR2J4,UBE2D4,LINC00957,SPDYE1,DBNL,URGCP,RASA4CP
SE_02_050700212 chr7:43967894-43993768 Sample_02_0507 Esophagus TE7_1 212 9 606 71 0 0 721 POLR2J4,UBE2D4,LINC00957,SPDYE1,URGCP,RASA4CP
SE_02_114200199 chr7:43968218-43983416 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 199 10 355 40 0 0 361 POLR2J4,SPDYE1,UBE2D4,URGCP
SE_02_103900208 chr7:43969417-43992017 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 208 5 534 62 0 0 721 POLR2J4,UBE2D4,LINC00957,SPDYE1,URGCP,RASA4CP
SE_02_077501674 chr7:44037045-44041826 Sample_02_0775 Pancreas EndoC-BH1_SE 1674 1 117 19 0 0 730 LINC00957,RASA4CP,PGAM2,MIR6837,MIR6838,SPDYE1,POLR2J4,DBNL,POLM
SE_02_104701612 chr7:44038291-44041687 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1612 1 70 7 0 0 714 LINC00957,RASA4CP,PGAM2,MIR6837,MIR6838,SPDYE1,POLR2J4,DBNL,POLM
SE_02_153000404 chr7:44038668-44052621 Sample_02_1530 Peripheral blood neutrophils_0BA0X 404 1 409 60 3 22 1182 LINC00957,MIR6837,DBNL,RASA4CP,PGAM2,MIR6838,SPDYE1,POLR2J4,POLM,AEBP1,UBE2D4
SE_02_153100538 chr7:44042210-44051532 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 538 2 298 45 3 22 321 LINC00957,DBNL,PGAM2,MIR6837,MIR6838,SPDYE1,POLR2J4,POLM,RASA4CP,AEBP1,UBE2D4
SE_01_008401603 chr7:44043492-44047934 Sample_01_0084 Spleen spleen 1603 1 114 23 3 16 210 DBNL,POLM,PGAM2,SPDYE1,FLJ35390,POLR2J4,RASA4P
SE_02_152900391 chr7:44043555-44052391 Sample_02_1529 Peripheral blood neutrophils_0BC75 391 1 258 39 3 22 359 LINC00957,MIR6837,DBNL,PGAM2,MIR6838,SPDYE1,POLR2J4,POLM,RASA4CP,AEBP1,UBE2D4
SE_02_075000765 chr7:44043686-44060308 Sample_02_0750 Lymphoma Rec-1_GSI 765 6 496 72 3 51 1114 LINC00957,MIR6837,DBNL,PGAM2,MIR6838,AEBP1,SPDYE1,POLR2J4,POLM,RASA4CP
SE_00_005500701 chr7:44043782-44059283 Sample_00_0055 Spleen spleen 34y 701 4 459 67 3 47 895 LINC00957,MIR6837,DBNL,PGAM2,MIR6838,AEBP1,SPDYE1,POLR2J4,POLM,RASA4CP
SE_02_092700657 chr7:44043811-44049446 Sample_02_0927 Peripheral blood neutrophils_US 657 1 142 26 3 16 210 LINC00957,DBNL,PGAM2,MIR6837,MIR6838,SPDYE1,POLR2J4,POLM,RASA4CP,AEBP1,UBE2D4
SE_02_021600344 chr7:44049959-44089092 Sample_02_0216 Skin NHEK_scramble 344 6 1178 122 0 119 3182 DBNL,PGAM2,POLM,AEBP1,SPDYE1,FLJ35390,POLD2,POLR2J4,RASA4P
Genomic distribution of SEs associated with SPDYE1
Genome Browser

The strength of the tissue affected by the gene

Expression of SPDYE1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)