SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113100236
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: T3M4 wt
Genomic region: chr7:43967556-43997740
Size: 30184
Super-enhancer rank 236
Number of SE elements: 16
ChIP density(Case|Control): 31509.0776|2466.0328
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPDYE1 ;
ROSE Overlap POLR2J4 ;
ROSE Proximal UBE2D4 ; LINC00957 ; SPDYE1 ; DBNL ; URGCP ; RASA4CP ;
ROSE Closest SPDYE1 ;
Lasso ;
PreSTIGE ;
ABC UBE2D4 ; MRPS24 ; URGCP-MRPS24 ; URGCP ;
BETA LINC00957 ; URGCP ; POLM ; RASA4CP ; PGAM2 ; DBNL ; MIR6837 ; SPDYE1 ; UBE2D4 ; MIR6838 ; URGCP-MRPS24 ; POLR2J4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113100236 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers