Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000172250
Gene: SERHL Gene type: transcribed_unitary_pseudogene
Strand: + External links:
Genomic region: chr22:42500568-42512560 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_054400052 chr22:42273826-42473490 Sample_02_0544 Brain Kelly_ResVeh 52 61 5596 687 15 936 2271 NFAM1,OGFRP1,LINC01315,SERHL,RRP7A
SE_02_104600022 chr22:42274002-42472998 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 22 94 5581 686 15 928 2242 NFAM1,OGFRP1,LINC01315,SERHL,RRP7A
SE_02_110000105 chr22:42283072-42463238 Sample_02_1100 Brain COG-N-415 105 73 5121 614 12 872 2056 NFAM1,LINC01315,OGFRP1,SERHL
SE_02_104700677 chr22:42418791-42452826 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 677 13 980 81 1 67 112 NFAM1,LINC01315,SERHL
SE_02_142901229 chr22:42436059-42458900 Sample_02_1429 Blood GM12878_WT 1229 4 611 49 0 31 0 SERHL,NFAM1
SE_02_004800639 chr22:42437548-42471168 Sample_02_0048 Embryo endodermal CyT49_HE 639 4 887 90 0 69 0 SERHL,NFAM1,RRP7A
SE_02_129200265 chr22:42458859-42463556 Sample_02_1292 Lung JHU-LX110-SCLC PDX 265 2 134 15 0 39 0 SERHL,NFAM1
SE_02_103501188 chr22:42512777-42546664 Sample_02_1035 Mammary gland HCC70_Vehicle 1188 13 1189 168 0 26 920 RRP7A,SERHL2,SERHL,RRP7BP
SE_02_076600904 chr22:42516069-42533568 Sample_02_0766 Ovary PEO1 904 7 613 81 0 7 399 RRP7A,SERHL2,SERHL,RRP7BP
SE_02_022300165 chr22:42517357-42559135 Sample_02_0223 Haematopoietic and lymphoid tissue MOLT4_1 165 3 1347 164 0 31 946 SERHL2,RRP7A,SERHL,RRP7B
SE_04_000101165 chr22:42517583-42563286 Sample_04_0001 Blood heat shocked K562 1165 10 1511 176 0 31 1036 SERHL2,RRP7A,SERHL,RRP7BP,POLDIP3
SE_02_082700763 chr22:42526586-42557020 Sample_02_0827 Stomach normal gastric 763 4 1035 123 0 19 622 SERHL2,SERHL,RRP7A,RRP7BP
SE_02_038700537 chr22:42529648-42551866 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 537 12 774 97 0 4 0 SERHL,SERHL2,RRP7A,RRP7B
SE_02_088500855 chr22:42531549-42554871 Sample_02_0885 Blood NALM6_2 855 3 815 100 0 8 170 SERHL2,SERHL,RRP7A,RRP7BP
SE_02_028800215 chr22:42532090-42552781 Sample_02_0288 Tonsil CB5_H3K27Ac 215 2 711 91 0 4 0 SERHL,SERHL2,RRP7A,RRP7B
SE_01_009600308 chr22:42532133-42563443 Sample_01_0096 B-cell lymphoma DOHH2 308 3 1010 115 0 24 834 SERHL2,SERHL,RRP7A,RRP7BP
SE_02_073600124 chr22:42532487-42551766 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 124 5 660 84 0 4 0 SERHL2,SERHL,RRP7A,RRP7BP
SE_02_040400059 chr22:42535081-42582303 Sample_02_0404 Mammary gland ZR-75-1_2 59 10 1916 223 1 53 2401 SERHL2,RRP7B,RNU12,RRP7A,SERHL,POLDIP3
SE_02_075201172 chr22:42539321-42550967 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1172 4 398 56 0 0 0 SERHL2,SERHL,RRP7A,RRP7BP
SE_02_075500681 chr22:42541664-42551263 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 681 4 326 45 0 0 0 SERHL2,SERHL,RRP7A,RRP7BP
SE_02_004300164 chr22:42545858-42577274 Sample_02_0043 Embryo endodermal CyT49_ES_D2 164 10 1324 143 1 42 2070 SERHL2,RRP7B,RNU12,RRP7A,SERHL,POLDIP3
SE_02_104801380 chr22:42546454-42578067 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1380 7 1355 146 1 42 2152 SERHL2,RRP7BP,SERHL,RNU12,POLDIP3,RRP7A

Genomic distribution of SEs associated with SERHL

The strength of the tissue affected by the gene


Expression of SERHL