Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000181031 |
| Gene: | RPH3AL | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr17:212389-386254 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_027500348 | chr17:289825-341574 |
Sample_02_0275 | Retina | FW14 | 348 | 10 | 2167 | 98 | 1 | 89 | 677 | RPH3AL |
| SE_01_008401059 | chr17:301417-386701 |
Sample_01_0084 | Spleen | spleen | 1059 | 12 | 3335 | 229 | 9 | 126 | 781 | RPH3AL,C17ORF97 |
| SE_02_077500347 | chr17:324893-386546 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 347 | 20 | 2302 | 180 | 8 | 93 | 569 | LOC100506388,RPH3AL,C17ORF97 |
| SE_02_004700384 | chr17:329627-347071 |
Sample_02_0047 | Pancreatic endoderm | IIDP/donor790 | 384 | 1 | 614 | 27 | 0 | 34 | 367 | RPH3AL |
| SE_02_003300111 | chr17:329821-387049 |
Sample_02_0033 | Pancreas | pancreatic-islets-F | 111 | 9 | 2140 | 175 | 8 | 82 | 471 | RPH3AL,C17ORF97 |
| SE_01_006900457 | chr17:329871-355815 |
Sample_01_0069 | Adrenal gland | adrenal-gland | 457 | 5 | 929 | 62 | 1 | 49 | 471 | RPH3AL |
| SE_02_003200289 | chr17:329930-341676 |
Sample_02_0032 | Pancreas | pancreatic-islets-M | 289 | 1 | 442 | 22 | 0 | 34 | 367 | RPH3AL |
| SE_00_002900255 | chr17:329986-358117 |
Sample_00_0029 | Ovary | ovary | 255 | 11 | 1059 | 76 | 1 | 50 | 471 | RPH3AL |
| SE_02_037400228 | chr17:330444-340300 |
Sample_02_0374 | Skeletal muscle | RMS209 | 228 | 2 | 396 | 22 | 0 | 34 | 367 | RPH3AL |
| SE_02_037700077 | chr17:330758-340403 |
Sample_02_0377 | Skeletal muscle | RMS238 | 77 | 7 | 396 | 21 | 0 | 34 | 367 | RPH3AL |
| SE_00_003401090 | chr17:330777-353737 |
Sample_00_0034 | Right cardiac atrium | right-cardiac-atrium | 1090 | 4 | 809 | 48 | 1 | 44 | 471 | RPH3AL |
| SE_00_003500412 | chr17:330832-354030 |
Sample_00_0035 | Sigmoid colon | sigmoid-colon | 412 | 5 | 819 | 47 | 1 | 44 | 471 | RPH3AL |
| SE_01_008200530 | chr17:330843-355476 |
Sample_01_0082 | Right lobe of liver | right-lobe-of-liver | 530 | 4 | 872 | 55 | 1 | 48 | 471 | RPH3AL |
| SE_00_004000277 | chr17:330888-353866 |
Sample_00_0040 | Spleen | spleen_30y | 277 | 5 | 811 | 47 | 1 | 44 | 471 | RPH3AL |
| SE_01_007900706 | chr17:330966-354523 |
Sample_01_0079 | Peyers patch | Peyers-patch | 706 | 4 | 836 | 48 | 1 | 43 | 471 | RPH3AL |
| SE_00_001400524 | chr17:331106-355413 |
Sample_00_0014 | Heart left ventricle | heart-left-ventricle | 524 | 4 | 860 | 54 | 1 | 47 | 447 | RPH3AL |
| SE_01_008501106 | chr17:331132-354985 |
Sample_01_0085 | Stomach | stomach | 1106 | 3 | 843 | 48 | 1 | 43 | 440 | RPH3AL |
| SE_00_004200721 | chr17:331143-354319 |
Sample_00_0042 | Stomach | stomach_30y | 721 | 6 | 821 | 46 | 1 | 43 | 440 | RPH3AL |
| SE_00_000300164 | chr17:331217-358411 |
Sample_00_0003 | Adrenal gland | adrenal-gland_97d | 164 | 5 | 1029 | 73 | 1 | 49 | 423 | RPH3AL |
| SE_01_007100078 | chr17:331374-355810 |
Sample_01_0071 | Pancreas | body-of-pancreas | 78 | 5 | 879 | 58 | 1 | 48 | 394 | RPH3AL |
| SE_01_009000771 | chr17:333570-355375 |
Sample_01_0090 | Lung | upper-lobe-of-left-lung | 771 | 3 | 755 | 45 | 1 | 41 | 155 | RPH3AL |
| SE_00_002200331 | chr17:333599-360700 |
Sample_00_0022 | Lung | lung_30y | 331 | 8 | 1048 | 81 | 1 | 44 | 152 | RPH3AL,C17ORF97 |
| SE_01_010101397 | chr17:334021-354412 |
Sample_01_0101 | Pancreas | pancreas_54y | 1397 | 6 | 716 | 39 | 1 | 34 | 117 | RPH3AL,LOC100506388 |
| SE_00_003000203 | chr17:334059-350128 |
Sample_00_0030 | Pancreas | pancreas | 203 | 6 | 555 | 20 | 1 | 29 | 9 | RPH3AL |
| SE_02_004600137 | chr17:334819-354006 |
Sample_02_0046 | Embryo endodermal | CyT49_ES_D10 | 137 | 3 | 667 | 38 | 1 | 34 | 104 | RPH3AL |
| SE_02_004500183 | chr17:335503-353942 |
Sample_02_0045 | Embryo endodermal | CyT49_ES_D7 | 183 | 4 | 631 | 36 | 1 | 34 | 104 | RPH3AL |
| SE_02_004800630 | chr17:336101-353826 |
Sample_02_0048 | Embryo endodermal | CyT49_HE | 630 | 4 | 596 | 34 | 1 | 34 | 104 | RPH3AL |
| SE_02_032500974 | chr17:337709-354990 |
Sample_02_0325 | Liver | hepatocytes_d1 | 974 | 4 | 560 | 34 | 1 | 19 | 104 | RPH3AL |
| SE_03_000700232 | chr17:338087-355852 |
Sample_03_0007 | Lung | A549_dexamethasone_12h | 232 | 2 | 592 | 44 | 1 | 24 | 104 | RPH3AL |
| SE_02_032601299 | chr17:338245-353825 |
Sample_02_0326 | Liver | hepatocytes_d3 | 1299 | 2 | 493 | 31 | 1 | 19 | 104 | RPH3AL |
| SE_01_001200252 | chr17:338247-355520 |
Sample_01_0012 | Lung | A549_dexamethasone_1h | 252 | 2 | 555 | 39 | 1 | 23 | 104 | RPH3AL |
| SE_03_000800259 | chr17:338288-358971 |
Sample_03_0008 | Lung | A549_dexamethasone_7h | 259 | 3 | 759 | 59 | 1 | 25 | 104 | RPH3AL |
| SE_03_000900223 | chr17:338311-359340 |
Sample_03_0009 | Lung | A549_dexamethasone_3h | 223 | 3 | 775 | 62 | 1 | 25 | 104 | RPH3AL |
| SE_03_001300235 | chr17:338327-358867 |
Sample_03_0013 | Lung | A549 | 235 | 3 | 749 | 58 | 1 | 25 | 104 | RPH3AL |
| SE_02_020700121 | chr17:338443-354771 |
Sample_02_0207 | Stomach | FU97 | 121 | 3 | 521 | 30 | 1 | 19 | 104 | RPH3AL |
| SE_03_001500280 | chr17:338447-355838 |
Sample_03_0015 | Lung | A549_dexamethasone_8h | 280 | 2 | 577 | 41 | 1 | 24 | 104 | RPH3AL |
| SE_02_004900590 | chr17:338458-354147 |
Sample_02_0049 | Embryo endodermal | CyT49_GTtoH | 590 | 2 | 495 | 29 | 1 | 19 | 104 | RPH3AL |
| SE_03_000400186 | chr17:338506-358568 |
Sample_03_0004 | Lung | A549_dexamethasone_4h | 186 | 3 | 730 | 58 | 1 | 25 | 104 | RPH3AL |
| SE_02_004400244 | chr17:338835-354023 |
Sample_02_0044 | Embryo endodermal | CyT49_ES_D5 | 244 | 3 | 484 | 28 | 1 | 17 | 104 | RPH3AL |
| SE_02_024100483 | chr17:340155-355002 |
Sample_02_0241 | Colon | V456 | 483 | 4 | 472 | 30 | 1 | 11 | 104 | RPH3AL |
| SE_03_001600220 | chr17:344485-355855 |
Sample_03_0016 | Lung | A549_dexamethasone_6h | 220 | 1 | 405 | 36 | 1 | 15 | 104 | RPH3AL |
| SE_03_001400242 | chr17:344540-355907 |
Sample_03_0014 | Lung | A549_dexamethasone_2h | 242 | 1 | 416 | 36 | 1 | 15 | 104 | RPH3AL |
| SE_03_001000245 | chr17:344735-355846 |
Sample_03_0010 | Lung | A549_dexamethasone_1h | 245 | 1 | 399 | 35 | 1 | 15 | 104 | RPH3AL |
| SE_03_001100127 | chr17:345407-355857 |
Sample_03_0011 | Lung | A549_dexamethasone_5h | 127 | 1 | 383 | 35 | 1 | 15 | 104 | RPH3AL |
| SE_03_000500249 | chr17:346160-355775 |
Sample_03_0005 | Lung | A549_dexamethasone_0.5h | 249 | 1 | 338 | 35 | 1 | 15 | 104 | RPH3AL |
| SE_02_004700680 | chr17:347118-356203 |
Sample_02_0047 | Pancreatic endoderm | IIDP/donor790 | 680 | 1 | 367 | 35 | 1 | 15 | 104 | RPH3AL |
| SE_01_000600410 | chr17:347242-355885 |
Sample_01_0006 | Lung | A549_ethanol_1h | 410 | 1 | 322 | 35 | 1 | 15 | 104 | RPH3AL |
| SE_02_029500438 | chr17:347757-355186 |
Sample_02_0295 | Lung | A549_TGFBeta_72h | 438 | 2 | 248 | 26 | 1 | 13 | 104 | RPH3AL |
| SE_00_004101162 | chr17:348017-354076 |
Sample_00_0041 | Stomach | stomach_3y | 1162 | 2 | 203 | 23 | 1 | 10 | 104 | RPH3AL |
| SE_02_003200373 | chr17:349801-355889 |
Sample_02_0032 | Pancreas | pancreatic-islets-M | 373 | 1 | 247 | 30 | 0 | 10 | 104 | RPH3AL |
| SE_02_104700759 | chr17:385220-422835 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 759 | 12 | 1275 | 163 | 4 | 38 | 739 | C17ORF97,FAM101B,RPH3AL |
| SE_02_104900670 | chr17:401991-426918 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 670 | 16 | 818 | 94 | 5 | 35 | 832 | C17ORF97,FAM101B,RPH3AL |
Genomic distribution of SEs associated with RPH3AL