Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | |
| Gene: | PLDN | Gene type: | |
| Strand: | External links: |
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| Genomic region: | :- | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_028800528 | chr15:45543683-45547350 |
Sample_02_0288 | Tonsil | CB5_H3K27Ac | 528 | 1 | 96 | 9 | 0 | 0 | 61 | C15ORF21,PLDN,SLC30A4 |
| SE_02_026100551 | chr15:45630264-45647539 |
Sample_02_0261 | Osteoblastic | hFOB_differentiated | 551 | 2 | 410 | 67 | 1 | 31 | 299 | SQRDL,PLDN |
| SE_02_010700947 | chr15:45630455-45649893 |
Sample_02_0107 | Endometrium | EEC16 | 947 | 3 | 472 | 74 | 1 | 34 | 299 | SQRDL,PLDN |
| SE_02_011001086 | chr15:45630456-45649887 |
Sample_02_0110 | Ovaries | IOE11 | 1086 | 3 | 472 | 74 | 1 | 34 | 299 | SQRDL,PLDN |
| SE_02_042800838 | chr15:45630542-45650880 |
Sample_02_0428 | Kidney | 12364284_VHL- | 838 | 8 | 508 | 75 | 1 | 34 | 299 | SQRDL,PLDN |
| SE_01_002700123 | chr15:45630559-45650197 |
Sample_01_0027 | Prostate | epithelial-cell-of-prostate | 123 | 3 | 477 | 74 | 1 | 34 | 299 | SQRDL,PLDN |
| SE_02_026800607 | chr15:45630561-45664789 |
Sample_02_0268 | Kidney | A-498 | 607 | 10 | 999 | 172 | 4 | 62 | 478 | SQRDL,PLDN |
| SE_02_001000463 | chr15:45630620-45661634 |
Sample_02_0010 | Kidney | A-498_emptyvector | 463 | 9 | 902 | 165 | 4 | 58 | 428 | SQRDL,PLDN |
| SE_02_011200877 | chr15:45630676-45649623 |
Sample_02_0112 | Connective tissue | HT1080_untreated | 877 | 5 | 449 | 73 | 1 | 34 | 299 | SQRDL,PLDN |
| SE_02_017201371 | chr15:45630692-45671396 |
Sample_02_0172 | Lung | IMR-90_quiescent | 1371 | 8 | 1141 | 180 | 4 | 73 | 521 | SQRDL,PLDN |
| SE_02_026200396 | chr15:45630749-45647338 |
Sample_02_0262 | Osteoblastic | hFOB_JQ1_differentiated | 396 | 3 | 395 | 65 | 1 | 31 | 299 | SQRDL,PLDN |
| SE_02_026900287 | chr15:45630770-45651008 |
Sample_02_0269 | Kidney | HK-2 | 287 | 7 | 517 | 76 | 1 | 34 | 299 | SQRDL,PLDN |
| SE_01_005600571 | chr15:45630776-45666256 |
Sample_01_0056 | Bone | osteoblast | 571 | 7 | 1027 | 173 | 4 | 66 | 478 | SQRDL,PLDN |
| SE_02_027000418 | chr15:45630804-45650999 |
Sample_02_0270 | Kidney | PCS-400 | 418 | 8 | 513 | 76 | 1 | 34 | 299 | SQRDL,PLDN |
| SE_02_001100591 | chr15:45630804-45661231 |
Sample_02_0011 | Kidney | A-498_wtVHL | 591 | 12 | 891 | 165 | 4 | 57 | 428 | SQRDL,PLDN |
| SE_01_007500619 | chr15:45630926-45661022 |
Sample_01_0075 | Esophagus squamous epithelium | esophagus-squamous-epithelium | 619 | 6 | 885 | 165 | 4 | 56 | 428 | SQRDL,PLDN |
| SE_02_016600648 | chr15:45630947-45661493 |
Sample_02_0166 | Mammary gland | HCC1954_Parental | 648 | 6 | 895 | 165 | 4 | 56 | 428 | SQRDL,PLDN |
| SE_01_008401217 | chr15:45631010-45661254 |
Sample_01_0084 | Spleen | spleen | 1217 | 7 | 889 | 165 | 4 | 56 | 415 | SQRDL,PLDN |
| SE_01_001800556 | chr15:45631019-45661183 |
Sample_01_0018 | Submandibular Salivary Gland | ACC112 | 556 | 5 | 885 | 165 | 4 | 56 | 412 | SQRDL,PLDN |
| SE_01_008500513 | chr15:45631075-45670845 |
Sample_01_0085 | Stomach | stomach | 513 | 7 | 1127 | 179 | 4 | 72 | 501 | SQRDL,PLDN |
| SE_02_039601994 | chr15:45631113-45659335 |
Sample_02_0396 | Skin | NHEK-D | 1994 | 12 | 829 | 159 | 4 | 54 | 399 | SQRDL,PLDN |
| SE_02_010200473 | chr15:45631122-45661358 |
Sample_02_0102 | Peripheral blood | Macrophages_GM-CSF_72h_IL4 | 473 | 7 | 888 | 165 | 4 | 56 | 403 | SQRDL,PLDN |
| SE_02_035400902 | chr15:45631144-45650575 |
Sample_02_0354 | Colon | Colo205 | 902 | 5 | 487 | 75 | 1 | 33 | 274 | SQRDL,PLDN |
| SE_02_010100193 | chr15:45631146-45671185 |
Sample_02_0101 | Peripheral blood | Macrophages_GM-CSF_72h_IFN-y | 193 | 6 | 1129 | 180 | 4 | 72 | 496 | SQRDL,PLDN |
| SE_01_004500496 | chr15:45631147-45649650 |
Sample_01_0045 | Mammary gland | mammary-epithelial-cell | 496 | 4 | 441 | 73 | 1 | 33 | 273 | SQRDL,PLDN |
| SE_02_025700598 | chr15:45631173-45661498 |
Sample_02_0257 | Endometrioid | endometrioid_adenocarcinoma_TumorA | 598 | 7 | 891 | 165 | 4 | 56 | 399 | SQRDL,PLDN |
| SE_02_024200659 | chr15:45631180-45661364 |
Sample_02_0242 | Colon | V481 | 659 | 4 | 888 | 165 | 4 | 56 | 399 | SQRDL,PLDN |
| SE_01_002900598 | chr15:45631191-45649569 |
Sample_01_0029 | Lung | fibroblast-of-lung | 598 | 5 | 434 | 73 | 1 | 33 | 267 | SQRDL,PLDN |
| SE_01_004100645 | chr15:45631225-45649609 |
Sample_01_0041 | Skin | keratinocyte | 645 | 4 | 435 | 73 | 1 | 33 | 258 | SQRDL,PLDN |
| SE_01_008900387 | chr15:45631236-45661457 |
Sample_01_0089 | Transverse colon | transverse-colon | 387 | 5 | 885 | 165 | 4 | 56 | 387 | SQRDL,PLDN |
| SE_02_010000463 | chr15:45631262-45660604 |
Sample_02_0100 | Peripheral blood | Macrophages_GM-CSF_72h | 463 | 9 | 866 | 164 | 4 | 54 | 382 | SQRDL,PLDN |
| SE_02_023700888 | chr15:45631264-45661296 |
Sample_02_0237 | Colon | V389 | 888 | 8 | 883 | 165 | 4 | 56 | 382 | SQRDL,PLDN |
| SE_02_010400644 | chr15:45631303-45655622 |
Sample_02_0104 | Blood | neutrophils | 644 | 6 | 670 | 114 | 3 | 38 | 253 | SQRDL,PLDN |
| SE_02_017500406 | chr15:45631453-45648980 |
Sample_02_0175 | Lung | IMR-90_Etoposide | 406 | 4 | 415 | 71 | 1 | 30 | 240 | SQRDL,PLDN |
| SE_02_009200402 | chr15:45631489-45646990 |
Sample_02_0092 | Umbilical cord | umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_3 | 402 | 5 | 365 | 64 | 1 | 30 | 240 | SQRDL,PLDN |
| SE_02_005700807 | chr15:45631511-45651309 |
Sample_02_0057 | Mammary gland | vHMEC | 807 | 7 | 510 | 76 | 1 | 33 | 240 | SQRDL,PLDN |
| SE_02_003300808 | chr15:45633885-45670769 |
Sample_02_0033 | Pancreas | pancreatic-islets-F | 808 | 5 | 1055 | 175 | 4 | 72 | 399 | SQRDL,PLDN |
| SE_01_009000605 | chr15:45633894-45661012 |
Sample_01_0090 | Lung | upper-lobe-of-left-lung | 605 | 5 | 812 | 161 | 4 | 56 | 306 | SQRDL,PLDN |
| SE_00_002001536 | chr15:45634074-45661077 |
Sample_00_0020 | Large intestine | large-intestine_108d | 1536 | 6 | 811 | 161 | 4 | 56 | 306 | SQRDL,PLDN |
| SE_00_003601313 | chr15:45634119-45649550 |
Sample_00_0036 | Small intestine | small-intestine_108days | 1313 | 5 | 366 | 69 | 1 | 33 | 177 | SQRDL,PLDN |
| SE_00_004100546 | chr15:45634160-45649320 |
Sample_00_0041 | Stomach | stomach_3y | 546 | 6 | 358 | 68 | 1 | 31 | 177 | SQRDL,PLDN |
| SE_00_004000993 | chr15:45634179-45654200 |
Sample_00_0040 | Spleen | spleen_30y | 993 | 8 | 557 | 96 | 2 | 38 | 177 | SQRDL,PLDN |
| SE_00_001100581 | chr15:45634253-45661145 |
Sample_00_0011 | Esophagus | esophagus | 581 | 8 | 808 | 161 | 4 | 56 | 306 | SQRDL,PLDN |
| SE_00_002200927 | chr15:45634265-45646640 |
Sample_00_0022 | Lung | lung_30y | 927 | 7 | 296 | 59 | 1 | 30 | 177 | SQRDL,PLDN |
| SE_00_003300208 | chr15:45634276-45649629 |
Sample_00_0033 | Psoas muscle | psoas-muscle_3y | 208 | 5 | 367 | 69 | 1 | 33 | 177 | SQRDL,PLDN |
| SE_00_003500236 | chr15:45634300-45661127 |
Sample_00_0035 | Sigmoid colon | sigmoid-colon | 236 | 9 | 808 | 161 | 4 | 56 | 306 | SQRDL,PLDN |
| SE_02_009300541 | chr15:45636534-45646146 |
Sample_02_0093 | Umbilical cord | umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 | 541 | 2 | 238 | 53 | 1 | 22 | 0 | SQRDL,PLDN |
| SE_01_005800810 | chr15:45636585-45649875 |
Sample_01_0058 | Prostate | PC-3 | 810 | 3 | 332 | 65 | 1 | 25 | 0 | SQRDL,PLDN |
| SE_02_010300590 | chr15:45636814-45661159 |
Sample_02_0103 | Peripheral blood | Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 | 590 | 5 | 755 | 156 | 4 | 48 | 129 | SQRDL,PLDN |
| SE_01_006200037 | chr15:45636852-45649493 |
Sample_01_0062 | Prostate | RWPE2 | 37 | 4 | 307 | 64 | 1 | 25 | 0 | SQRDL,PLDN |
Genomic distribution of SEs associated with PLDN