SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000269420
Gene: PLA2G4C-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr19:48061371-48064945 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_044200371 chr19:48068575-48108731 Sample_02_0442 Bone MG63.3 371 22 1311 203 8 17 818 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_044300243 chr19:48079768-48108872 Sample_02_0443 Bone MG63 243 20 990 185 8 16 669 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_154900431 chr19:48081381-48103102 Sample_02_1549 Gastrointestinal Stromal GIST-430B 431 6 765 146 5 15 434 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_148100480 chr19:48082424-48103100 Sample_02_1481 Bone MIC 480 2 724 140 5 15 434 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_148500825 chr19:48082519-48092548 Sample_02_1485 Bone SK-ES-1 825 4 337 61 0 5 131 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_070100538 chr19:48082705-48091937 Sample_02_0701 Bone David_TC32 538 7 308 58 0 5 131 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_103501944 chr19:48082740-48137675 Sample_02_1035 Mammary gland HCC70_Vehicle 1944 17 1844 288 10 79 2345 PLA2G4C,LIG1,PLA2G4C-AS1,CABP5,C19ORF68
SE_02_148900196 chr19:48083475-48103674 Sample_02_1489 Bone TC-106 196 6 712 143 5 15 434 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_094100371 chr19:48083908-48103654 Sample_02_0941 Brain T98G 371 7 693 136 5 15 434 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_148700195 chr19:48084156-48091882 Sample_02_1487 Bone TC-32 195 6 263 44 0 5 131 PLA2G4C,PLA2G4C-AS1,CABP5
SE_02_119801059 chr19:48106464-48124961 Sample_02_1198 Brain GBM34 1059 8 635 68 1 33 917 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_117300761 chr19:48106471-48135801 Sample_02_1173 Brain GBM01 761 11 974 108 2 51 1427 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_111101073 chr19:48106972-48153143 Sample_02_1111 Other HGrC1_SMAD2/3KO 1073 14 1565 206 2 82 2216 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_152000045 chr19:48107010-48127440 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 45 13 703 75 1 34 935 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_095000703 chr19:48107076-48127311 Sample_02_0950 Umbilical vein HUVEC_WT 703 11 697 75 1 34 914 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_083200158 chr19:48107127-48126594 Sample_02_0832 Umblical vein HUVECs_TNF30min 158 9 675 72 1 33 871 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_058500371 chr19:48107149-48127085 Sample_02_0585 Umbilical vein HUVEC 0hour 371 7 686 74 1 33 871 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_156901048 chr19:48107281-48126681 Sample_02_1569 Endothelial Endothelial cells 1048 4 672 70 1 33 871 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_146900280 chr19:48107334-48126683 Sample_02_1469 Umbilical Vein HUVEC 280 6 672 70 1 33 871 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_151900111 chr19:48107386-48127410 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 111 17 693 72 1 34 931 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_104601439 chr19:48107481-48161265 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1439 11 1848 243 2 90 2425 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_147100542 chr19:48107493-48126682 Sample_02_1471 Blood Outgrowth Endothelia BOEC 542 4 670 68 1 33 871 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_151800173 chr19:48107496-48126513 Sample_02_1518 Umbilical vein HUVEC_Scr 173 12 663 68 1 33 871 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_083100288 chr19:48107542-48127238 Sample_02_0831 Umblical vein HUVECs_TNF0min 288 12 683 71 1 33 894 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
SE_02_155600399 chr19:48107598-48124987 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 399 7 606 64 1 33 871 PLA2G4C,LIG1,PLA2G4C-AS1,C19ORF68
Genomic distribution of SEs associated with PLA2G4C-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of PLA2G4C-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)