SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000165282
Gene: PIGO Gene type: protein_coding
Strand: - External links:
Genomic region: chr9:35088688-35096601 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_088600890 chr9:34991903-35047052 Sample_02_0886 Skin foreskin_ p63KLF4 890 13 1386 119 1 175 1378 DNAJB5,C9ORF131,FANCG,PHF24,DNAJB5-AS1,PIGO,VCP
SE_02_068200043 chr9:35018998-35051478 Sample_02_0682 Blood Kasumi-1 43 7 844 76 1 29 880 C9ORF131,FANCG,DNAJB5-AS1,VCP,PIGO,DNAJB5
SE_02_093000703 chr9:35024654-35051398 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 703 22 669 59 1 29 880 C9ORF131,FANCG,DNAJB5-AS1,VCP,PIGO,DNAJB5,FAM214B,C9orf131
SE_02_065900398 chr9:35057036-35075339 Sample_02_0659 Lung H23 398 8 467 37 0 181 1531 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_074600558 chr9:35064660-35072738 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 558 3 208 13 0 66 527 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_116600947 chr9:35069423-35081070 Sample_02_1166 Biliary H69_TGF beta_16h_1 947 4 290 24 0 75 1394 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_096300443 chr9:35069565-35081272 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 443 2 294 25 0 75 1394 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_01_001200640 chr9:35069570-35081235 Sample_01_0012 Lung A549_dexamethasone_1h 640 2 294 25 0 75 1394 VCP,FANCG,STOML2,PIGO,KIAA1539,C9ORF131
SE_02_143201031 chr9:35069583-35072761 Sample_02_1432 Bone A673 STAG2 WT 1031 2 87 8 0 25 282 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_039500606 chr9:35069835-35080974 Sample_02_0395 Mammary gland BT-549 606 2 277 22 0 75 1394 VCP,FANCG,STOML2,PIGO,KIAA1539,C9ORF131
SE_02_064501599 chr9:35069975-35072723 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1599 2 74 6 0 20 271 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_064601130 chr9:35070400-35072671 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1130 1 64 5 0 18 263 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_065000902 chr9:35070413-35072696 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 902 1 64 5 0 20 268 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_116801049 chr9:35070419-35081069 Sample_02_1168 Biliary H69_TGF Vehicle_2 1049 5 267 21 0 75 1394 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_00_003901148 chr9:35070502-35073548 Sample_00_0039 Spleen spleen_3y 1148 1 76 5 0 33 308 VCP,STOML2,PIGO,KIAA1539,C9ORF131,FANCG,C9orf131,FA214B,STOL2,UNC13B
SE_02_003801751 chr9:35070586-35074035 Sample_02_0038 Embryo DE 1751 1 92 5 0 36 351 VCP,FANCG,STOML2,PIGO,KIAA1539,C9ORF131
SE_02_142600768 chr9:35070633-35073482 Sample_02_1426 Shoulder fibroblast_341 768 1 74 5 0 32 308 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_068701125 chr9:35070678-35081568 Sample_02_0687 Lung NCI-H146_no infection 1125 2 275 22 0 75 1394 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_02_136500870 chr9:35070696-35072769 Sample_02_1365 Pancreas AsPC1-untreated 870 1 61 5 0 25 284 VCP,FANCG,C9ORF131,PIGO,FAM214B,STOML2
SE_01_003300429 chr9:35070721-35073834 Sample_01_0033 Embryo H9 429 1 81 5 0 33 329 VCP,STOML2,PIGO,KIAA1539,C9ORF131,FANCG
SE_02_146001471 chr9:35100829-35113175 Sample_02_1460 Blood Mutz-3 1471 3 311 17 0 338 2041 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_111101088 chr9:35100939-35116896 Sample_02_1111 Other HGrC1_SMAD2/3KO 1088 8 401 26 0 381 2163 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_149200972 chr9:35100974-35117393 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 972 3 419 29 0 381 2161 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_039500649 chr9:35101123-35117532 Sample_02_0395 Mammary gland BT-549 649 3 419 29 0 381 2134 STOML2,KIAA1539,PIGO,VCP,UNC13B,FANCG
SE_02_032800507 chr9:35101732-35117635 Sample_02_0328 Embryo H9_naive 507 2 411 27 0 370 2021 STOML2,KIAA1539,PIGO,VCP,UNC13B,FANCG
SE_02_012500661 chr9:35101747-35117169 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 661 2 395 25 0 369 2019 STOML2,KIAA1539,PIGO,VCP,UNC13B,FANCG
SE_02_061700271 chr9:35101780-35117449 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 271 3 405 27 0 370 2014 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_146800418 chr9:35101828-35117056 Sample_02_1468 Blood HUDEP-2_WT 418 1 390 25 0 369 2006 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_097200247 chr9:35101859-35116871 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 247 4 381 24 0 369 2003 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_146700184 chr9:35101885-35117117 Sample_02_1467 Blood HUDEP-2_LRFKO 184 1 387 23 0 369 1998 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_027500644 chr9:35101923-35117329 Sample_02_0275 Retina FW14 644 3 393 25 0 369 1992 STOML2,KIAA1539,PIGO,VCP,UNC13B,FANCG
SE_02_096300297 chr9:35101966-35117424 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 297 3 396 25 0 368 1987 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_027600485 chr9:35102060-35116914 Sample_02_0276 Retina FW15 485 4 376 22 0 367 1977 STOML2,KIAA1539,PIGO,VCP,UNC13B,FANCG
SE_02_143201408 chr9:35102087-35105471 Sample_02_1432 Bone A673 STAG2 WT 1408 1 89 2 0 98 506 FAM214B,STOML2,FANCG,PIGO,VCP
SE_02_143300809 chr9:35102158-35107137 Sample_02_1433 Bone A673 STAG2 null 809 1 138 4 0 135 832 FAM214B,STOML2,FANCG,PIGO,VCP
SE_02_074500548 chr9:35102354-35116301 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 548 7 351 21 0 352 1930 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_147101131 chr9:35102357-35113584 Sample_02_1471 Blood Outgrowth Endothelia BOEC 1131 3 284 15 0 317 1787 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_041800104 chr9:35102395-35115469 Sample_02_0418 Embryo H9_Null+EZH2 104 2 337 21 0 336 1784 STOML2,KIAA1539,PIGO,VCP,UNC13B,FANCG
SE_01_009500359 chr9:35102487-35114195 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 359 3 294 15 0 319 1782 FAM214B,STOML2,FANCG,PIGO,VCP,UNC13B
SE_02_087501215 chr9:35105609-35117415 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 1215 1 301 23 0 269 1451 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2,DNAJB5
SE_02_001600258 chr9:35106125-35117319 Sample_02_0016 Blood erythroblasts 258 1 291 23 0 247 1328 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
SE_02_146600422 chr9:35106542-35116934 Sample_02_1466 Blood HUDEP-2_BCL11AKO 422 1 263 20 0 233 1247 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_088601168 chr9:35106826-35122815 Sample_02_0886 Skin foreskin_ p63KLF4 1168 5 391 31 0 231 1172 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_101800255 chr9:35106861-35112951 Sample_02_1018 Erythroblast CD34+ Hematopoietic stem/progenitor cells_12 days 255 3 152 11 0 181 1025 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_004700853 chr9:35107266-35117637 Sample_02_0047 Pancreatic endoderm IIDP/donor790 853 1 259 21 0 230 1111 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
SE_02_109500712 chr9:35107662-35116609 Sample_02_1095 Blood CD34 Erythroid cells_Don002 712 2 219 18 0 202 1018 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_01_009301205 chr9:35107990-35118256 Sample_01_0093 Aorta ascending aorta 1205 2 253 21 0 179 930 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_045200819 chr9:35108070-35116790 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 819 3 208 16 0 167 904 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_127901599 chr9:35108745-35116823 Sample_02_1279 Bone Mesenchymal stem cells 1599 4 192 16 0 137 750 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_026400951 chr9:35109379-35117945 Sample_02_0264 Skeletal muscle 7250-empty 951 1 213 19 0 130 643 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
SE_02_113901029 chr9:35109527-35117043 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1029 2 184 15 0 123 613 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_021101030 chr9:35109550-35117224 Sample_02_0211 Lung MRC-5_NFD_1DPT 1030 3 187 15 0 123 607 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
SE_02_113600682 chr9:35109573-35116976 Sample_02_1136 Bone U2OS-anaphase/telophase 682 3 180 15 0 123 604 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_120000827 chr9:35109643-35116926 Sample_02_1200 Brain GBM36 827 3 173 14 0 123 595 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_119800717 chr9:35109685-35117008 Sample_02_1198 Brain GBM34 717 4 179 15 0 123 586 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_064502265 chr9:35109739-35114097 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 2265 5 100 7 0 77 435 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_093801058 chr9:35109746-35115926 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1058 3 153 13 0 102 529 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_158401424 chr9:35109747-35116896 Sample_02_1584 Brain U87 GBM_Mock 1424 2 171 14 0 123 575 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_01_008801236 chr9:35109756-35117956 Sample_01_0088 Tibial nerve tibial-nerve 1236 1 202 18 0 124 574 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
SE_02_119301085 chr9:35109807-35117423 Sample_02_1193 Brain GBM27 1085 2 189 17 0 123 569 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_093500484 chr9:35109820-35112373 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 484 2 46 3 0 67 425 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_136500987 chr9:35109894-35116945 Sample_02_1365 Pancreas AsPC1-untreated 987 3 172 15 0 123 549 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_01_010701265 chr9:35109986-35117571 Sample_01_0107 Esophagus esophagus squamous epithelium 1265 1 192 16 0 124 543 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_126900750 chr9:35110058-35116942 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 750 2 170 14 0 123 529 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_117400822 chr9:35110127-35116856 Sample_02_1174 Brain GBM02 822 4 166 13 0 123 519 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_00_000600417 chr9:35110135-35117332 Sample_00_0006 Blood CD14-positive-monocyte 417 1 183 16 0 122 517 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
SE_02_118900620 chr9:35110267-35116909 Sample_02_1189 Brain GBM22 620 6 166 13 0 122 491 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_02_055700931 chr9:35110505-35115905 Sample_02_0557 iPSCs WT hiPSC#1 931 3 141 12 0 91 385 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_00_003800597 chr9:35110614-35117272 Sample_00_0038 Spinal cord spinal-cord_108d 597 2 172 16 0 109 406 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
SE_00_005501220 chr9:35110870-35116950 Sample_00_0055 Spleen spleen 34y 1220 4 155 14 0 100 370 FAM214B,FANCG,PIGO,VCP,UNC13B,STOML2
SE_00_001001011 chr9:35113652-35117102 Sample_00_0010 Embryo endodermal-cell 1011 1 92 8 0 47 143 KIAA1539,PIGO,VCP,UNC13B,STOML2,FANCG
Genomic distribution of SEs associated with PIGO
Genome Browser

The strength of the tissue affected by the gene

Expression of PIGO

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)