SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_039500606
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: BT-549
Genomic region: chr9:35069835-35080974
Size: 11139
Super-enhancer rank 606
Number of SE elements: 2
ChIP density(Case|Control): 26888.4321|4618.2294
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VCP;
ROSE Overlap VCP; FANCG;
ROSE Proximal STOML2; PIGO; KIAA1539; C9orf131;
ROSE Closest VCP;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_039500606 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers