SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000184117
Gene: NIPSNAP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr22:29554808-29581327 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_039601230 chr22:29584068-29627794 Sample_02_0396 Skin NHEK-D 1230 12 1132 151 1 81 223 NF2,THOC5,NIPSNAP1
SE_02_039500249 chr22:29584959-29631106 Sample_02_0395 Mammary gland BT-549 249 6 1181 151 1 111 279 NF2,THOC5,NIPSNAP1
SE_02_031700105 chr22:29587037-29640889 Sample_02_0317 Neuroblastoma GICAN 105 3 1330 149 1 180 398 NF2,THOC5,NIPSNAP1
SE_02_076300295 chr22:29587205-29638523 Sample_02_0763 Podocyte podocyte_DEX 295 8 1271 143 0 169 349 NF2,NIPSNAP1,THOC5
SE_02_061000066 chr22:29587256-29635354 Sample_02_0610 Liposarcoma MLS 1765-92 66 10 1202 140 0 140 279 NF2,NIPSNAP1,THOC5
SE_02_030500869 chr22:29587333-29628228 Sample_02_0305 Neuroblastoma SH-EP 869 3 1045 135 0 93 223 NF2,THOC5,NIPSNAP1
SE_02_127900347 chr22:29587336-29645900 Sample_02_1279 Bone Mesenchymal stem cells 347 15 1470 162 0 208 448 NF2,NIPSNAP1,THOC5
SE_02_044300455 chr22:29587364-29645003 Sample_02_0443 Bone MG63 455 21 1449 158 0 203 448 NF2,NIPSNAP1,THOC5
SE_02_016400417 chr22:29587380-29643463 Sample_02_0164 Lung H2087_Parental 417 8 1394 151 0 203 448 NF2,THOC5,NIPSNAP1
SE_02_016500135 chr22:29587380-29643463 Sample_02_0165 Lung H2087_LCC2 135 8 1394 151 0 203 448 NF2,THOC5,NIPSNAP1
SE_02_066000589 chr22:29587497-29629658 Sample_02_0660 Mammary gland MCF10DCIS 589 13 1076 136 0 96 279 NF2,NIPSNAP1,THOC5
SE_02_088300220 chr22:29587513-29635553 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 220 6 1207 138 0 140 279 NF2,NIPSNAP1,THOC5
SE_02_049200324 chr22:29587566-29634021 Sample_02_0492 Pharyng Detroit 562_LPS 324 7 1163 136 0 137 279 NF2,NIPSNAP1,THOC5
SE_02_048101083 chr22:29587585-29635012 Sample_02_0481 Mammary gland MDA-MB231 1083 12 1186 137 0 140 279 NF2,NIPSNAP1,THOC5
SE_02_053000763 chr22:29587596-29624815 Sample_02_0530 Mammary gland MCF10A 763 12 965 129 0 68 223 NF2,NIPSNAP1,THOC5
SE_02_060300304 chr22:29587608-29627188 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 304 10 1020 133 0 74 223 NF2,NIPSNAP1,THOC5
SE_02_150301098 chr22:29587682-29633974 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 1098 9 1158 135 0 137 279 NF2,NIPSNAP1,THOC5
SE_02_157900293 chr22:29587718-29637484 Sample_02_1579 Renal 786-M1A 293 11 1245 138 0 157 349 NF2,NIPSNAP1,THOC5
SE_02_113200163 chr22:29587747-29627370 Sample_02_1132 Pancreas KLM1 wt 163 11 1023 131 0 78 223 NF2,NIPSNAP1,THOC5
SE_02_122800172 chr22:29587800-29635047 Sample_02_1228 Mammary gland MDA-MB-231_2 172 18 1183 135 0 140 279 NF2,NIPSNAP1,THOC5
SE_02_158100126 chr22:29587982-29638244 Sample_02_1581 Renal OS-LM1 126 10 1256 137 0 169 349 NF2,NIPSNAP1,THOC5
SE_02_138200305 chr22:29588067-29642208 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 305 21 1358 147 0 195 417 NF2,NIPSNAP1,THOC5
SE_02_042800192 chr22:29588175-29639421 Sample_02_0428 Kidney 12364284_VHL- 192 9 1281 139 0 176 398 NF2,THOC5,NIPSNAP1
SE_02_104701386 chr22:29589317-29675073 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1386 23 2105 211 4 299 1030 NF2,CABP7,THOC5,NIPSNAP1
SE_02_098900801 chr22:29589929-29648937 Sample_02_0989 Kidney kidney cortex_WT 801 15 1471 155 0 197 448 NF2,NIPSNAP1,THOC5
SE_02_035200408 chr22:29589978-29625790 Sample_02_0352 Colon HCT116 408 4 937 119 0 56 223 NF2,THOC5,NIPSNAP1
SE_02_029400497 chr22:29590019-29627655 Sample_02_0294 Pancreatic L3-6_DMSO 497 3 974 122 0 62 223 NF2,THOC5,NIPSNAP1
SE_02_138300604 chr22:29590234-29637133 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 604 17 1180 129 0 141 349 NF2,NIPSNAP1,THOC5
SE_02_027000168 chr22:29596855-29641252 Sample_02_0270 Kidney PCS-400 168 8 1068 99 0 164 398 NF2,THOC5,NIPSNAP1
SE_02_116801036 chr22:29601236-29626494 Sample_02_1168 Biliary H69_TGF Vehicle_2 1036 5 579 53 0 56 223 NF2,NIPSNAP1,THOC5
SE_02_049100305 chr22:29601439-29627729 Sample_02_0491 Pharyng Detroit 562-Control 305 4 599 54 0 61 223 NF2,NIPSNAP1,THOC5
SE_02_105400328 chr22:29601473-29637162 Sample_02_1054 Esophagus SKGT4 328 12 808 61 0 140 349 NF2,NIPSNAP1,THOC5
SE_02_011000490 chr22:29602290-29636992 Sample_02_0110 Ovaries IOE11 490 2 791 58 0 140 339 NF2,THOC5,NIPSNAP1
SE_02_010700199 chr22:29602358-29637785 Sample_02_0107 Endometrium EEC16 199 2 802 59 0 140 349 NF2,THOC5,NIPSNAP1
SE_02_026100838 chr22:29602580-29628818 Sample_02_0261 Osteoblastic hFOB_differentiated 838 2 608 54 0 77 253 NF2,THOC5,NIPSNAP1
SE_02_011100439 chr22:29602639-29635111 Sample_02_0111 Ovaries IOE4 439 3 739 56 0 122 279 NF2,THOC5,NIPSNAP1
SE_02_006900481 chr22:29602810-29634332 Sample_02_0069 Brain SF268 481 5 721 55 0 119 279 NF2,THOC5,NIPSNAP1
SE_00_002300061 chr22:29602831-29642512 Sample_00_0023 Embryo mesenchymal-stem-cell 61 10 920 69 0 180 448 NF2,THOC5,NIPSNAP1
SE_02_113800147 chr22:29602917-29646418 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 147 8 1019 80 0 190 448 NF2,NIPSNAP1,THOC5
SE_02_039800307 chr22:29603412-29633998 Sample_02_0398 Mammary gland MDA-MB-231-MCF-7 307 4 685 52 0 116 266 NF2,THOC5,NIPSNAP1
SE_02_061500618 chr22:29603469-29626498 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 618 4 529 47 0 51 200 NF2,NIPSNAP1,THOC5
SE_02_015000293 chr22:29603504-29634352 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 293 4 694 52 0 115 246 NF2,THOC5,NIPSNAP1
SE_02_026300531 chr22:29603530-29642103 Sample_02_0263 Osteoblastic hFOB_undifferentiated 531 3 880 65 0 172 363 NF2,THOC5,NIPSNAP1
SE_02_156900290 chr22:29603533-29645440 Sample_02_1569 Endothelial Endothelial cells 290 8 975 74 0 180 403 NF2,NIPSNAP1,THOC5
SE_02_095000412 chr22:29603548-29645864 Sample_02_0950 Umbilical vein HUVEC_WT 412 23 986 77 0 184 398 NF2,NIPSNAP1,THOC5
SE_02_116600440 chr22:29603561-29626680 Sample_02_1166 Biliary H69_TGF beta_16h_1 440 7 530 47 0 47 172 NF2,NIPSNAP1,THOC5
SE_02_144400182 chr22:29603561-29635325 Sample_02_1444 Adipose SW872_Empty Vector 182 12 716 53 0 114 228 NF2,NIPSNAP1,THOC5
SE_02_113600109 chr22:29603566-29633661 Sample_02_1136 Bone U2OS-anaphase/telophase 109 5 675 52 0 109 224 NF2,NIPSNAP1,THOC5
SE_02_135100554 chr22:29603568-29627265 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 554 4 543 49 0 48 168 NF2,NIPSNAP1,THOC5
SE_02_057200135 chr22:29603573-29633890 Sample_02_0572 Brain LN229_1_mM_glucose 135 7 678 52 0 109 224 NF2,NIPSNAP1,THOC5
SE_02_076200478 chr22:29603579-29638806 Sample_02_0762 Podocyte podocyte_CTL 478 6 795 56 0 141 294 NF2,NIPSNAP1,THOC5
SE_02_135200697 chr22:29603583-29626483 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 697 4 526 47 0 45 168 NF2,NIPSNAP1,THOC5
SE_02_132100231 chr22:29603584-29636235 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 231 13 742 53 0 113 224 NF2,NIPSNAP1,THOC5
SE_02_116900456 chr22:29603585-29626683 Sample_02_1169 Biliary H69_TGF beta_16h_2 456 6 531 47 0 45 168 NF2,NIPSNAP1,THOC5
SE_02_132000479 chr22:29603589-29635412 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 479 13 718 53 0 112 224 NF2,NIPSNAP1,THOC5
SE_02_143800510 chr22:29603592-29635548 Sample_02_1438 Liver LSEC 510 7 725 53 0 112 224 NF2,NIPSNAP1,THOC5
SE_02_081100633 chr22:29603599-29637710 Sample_02_0811 Thyroid BCPAP 633 14 768 56 0 129 293 NF2,NIPSNAP1,THOC5
SE_02_144900177 chr22:29603611-29635524 Sample_02_1449 Adipose SW872_YAP_TFE3 177 7 722 53 0 112 222 NF2,NIPSNAP1,THOC5
SE_02_132800250 chr22:29603613-29636802 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 250 17 749 55 0 123 253 NF2,NIPSNAP1,THOC5
SE_02_124000036 chr22:29603613-29645055 Sample_02_1240 Skin MCC13_virus_negative 36 7 964 73 0 175 391 NF2,NIPSNAP1,THOC5
SE_02_143600467 chr22:29603618-29636991 Sample_02_1436 Liver LSEC-Ctrl 467 17 757 55 0 129 280 NF2,NIPSNAP1,THOC5
SE_02_127100204 chr22:29603620-29636681 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 204 13 747 55 0 121 234 NF2,NIPSNAP1,THOC5
SE_02_077000452 chr22:29603635-29648941 Sample_02_0770 Ovary OVCA429_shLuc 452 23 1042 82 0 182 384 NF2,NIPSNAP1,THOC5
SE_02_143700679 chr22:29603650-29634650 Sample_02_1437 Liver LSEC-TNF 679 10 694 52 0 108 209 NF2,NIPSNAP1,THOC5
SE_02_057100131 chr22:29603678-29635179 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 131 13 709 53 0 109 205 NF2,NIPSNAP1,THOC5
SE_02_127600180 chr22:29603683-29636825 Sample_02_1276 Prostate PC3_GSK126 180 25 748 55 0 121 237 NF2,NIPSNAP1,THOC5
SE_02_028100049 chr22:29603695-29636789 Sample_02_0281 Bone U2OS 49 2 748 55 0 119 226 NF2,THOC5,NIPSNAP1
SE_02_000900178 chr22:29604026-29637934 Sample_02_0009 Kidney 786-O_wtVHL 178 12 762 54 0 122 164 NF2,NIPSNAP1
SE_02_020100053 chr22:29604069-29627892 Sample_02_0201 Stomach MKN7 53 8 541 47 0 53 33 NF2,NIPSNAP1
SE_02_042900168 chr22:29604187-29639043 Sample_02_0429 Kidney 12364284_VHL+ 168 10 780 56 0 132 151 NF2,NIPSNAP1
SE_02_132200313 chr22:29604633-29636048 Sample_02_1322 Connective Tissue HT1080_WT 313 9 717 51 0 101 56 NF2,NIPSNAP1
SE_02_045200664 chr22:29604884-29633807 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 664 9 651 50 0 97 56 NF2,NIPSNAP1
SE_02_147100347 chr22:29604905-29637136 Sample_02_1471 Blood Outgrowth Endothelia BOEC 347 13 734 54 0 117 126 NF2,NIPSNAP1
SE_02_077100243 chr22:29605188-29649551 Sample_02_0771 Ovary OVCA429_shGRHL2 243 20 1032 81 0 173 225 NF2,NIPSNAP1,THOC5
SE_02_001200493 chr22:29605224-29637652 Sample_02_0012 Kidney 786-O_non-targeting 493 7 739 54 0 117 126 NF2,NIPSNAP1
SE_02_093800175 chr22:29605294-29634052 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 175 3 652 50 0 97 56 NF2,NIPSNAP1
SE_02_086400354 chr22:29605419-29643096 Sample_02_0864 Malignant rhaboid tumor TTC1240_SMARCB1_K364del 354 15 866 64 0 163 225 NF2,NIPSNAP1
SE_02_049900665 chr22:29605422-29629919 Sample_02_0499 Fetal lung IMR90 IR Senescence 665 8 561 49 0 59 56 NF2,NIPSNAP1
SE_02_113900337 chr22:29605451-29645954 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 337 8 949 75 0 168 225 NF2,NIPSNAP1
SE_02_094900374 chr22:29605483-29646042 Sample_02_0949 Umbilical artery HUAEC_WT 374 23 948 74 0 168 225 NF2,NIPSNAP1
SE_02_158300213 chr22:29605494-29636537 Sample_02_1583 Fetal lung IMR90_empty_GM 213 16 702 52 0 105 56 NF2,NIPSNAP1
SE_02_076700457 chr22:29605539-29637357 Sample_02_0767 Ovary OVCA429 457 21 723 53 0 117 126 NF2,NIPSNAP1,THOC5
SE_02_095100510 chr22:29605669-29633636 Sample_02_0951 HMSCs hMSCs 510 9 626 49 0 97 56 NF2,NIPSNAP1
SE_02_086600263 chr22:29605670-29643254 Sample_02_0866 Malignant rhaboid tumor TTC1240_SMARCB1_delCC 263 12 860 63 0 163 225 NF2,NIPSNAP1
SE_02_050000973 chr22:29605728-29629588 Sample_02_0500 Fetal lung IMR90_#2 973 9 544 48 0 56 56 NF2,NIPSNAP1
SE_02_139800214 chr22:29605884-29635245 Sample_02_1398 Bone U2OS_siNC 214 10 662 50 0 100 56 NF2,NIPSNAP1
SE_02_061900689 chr22:29605904-29627819 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 689 5 503 46 0 42 0 NF2,NIPSNAP1
SE_02_138800249 chr22:29605944-29650765 Sample_02_1388 Peripheral blood JB6_ALK+ 249 8 1036 82 0 173 225 NF2,NIPSNAP1
SE_02_158000689 chr22:29605951-29637008 Sample_02_1580 Renal 786-O 689 7 708 52 0 117 116 NF2,NIPSNAP1
SE_02_111100751 chr22:29605990-29627814 Sample_02_1111 Other HGrC1_SMAD2/3KO 751 5 502 46 0 42 0 NF2,NIPSNAP1
SE_02_127500447 chr22:29606010-29635778 Sample_02_1275 Prostate PC3_Vorinostat 447 27 682 50 0 101 56 NF2,NIPSNAP1
SE_02_045100556 chr22:29606266-29635223 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 556 6 649 46 0 100 56 NF2,NIPSNAP1
SE_02_026700232 chr22:29606288-29641309 Sample_02_0267 Kidney 786-O 232 9 784 56 0 142 175 NF2,NIPSNAP1
SE_02_000800197 chr22:29606319-29626679 Sample_02_0008 Kidney 786-O_empty_vector 197 9 465 40 0 33 0 NF2,NIPSNAP1
SE_02_136000360 chr22:29606366-29628418 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 360 5 504 44 0 53 0 NF2,NIPSNAP1
SE_02_156800385 chr22:29606368-29635816 Sample_02_1568 Heart Cardiac progenitor cells 385 9 673 46 0 101 56 NF2,NIPSNAP1
SE_02_058500921 chr22:29606434-29635234 Sample_02_0585 Umbilical vein HUVEC 0hour 921 14 647 46 0 100 56 NF2,NIPSNAP1
SE_02_076000908 chr22:29606729-29627530 Sample_02_0760 Ovary BIN-67_SMARCA4 908 3 470 39 0 38 0 NF2,NIPSNAP1
SE_02_088200302 chr22:29606897-29627751 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 302 4 472 39 0 38 0 NF2,NIPSNAP1
SE_02_063800765 chr22:29606902-29634905 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 765 8 621 42 0 100 56 NF2,NIPSNAP1
SE_02_063400329 chr22:29614634-29656321 Sample_02_0634 Gastrointestinal Stromal GIST-48B_JQ1 329 16 943 73 1 205 317 NF2,NIPSNAP1
SE_02_137500735 chr22:29615026-29661479 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 735 11 1054 86 1 228 435 NF2,NIPSNAP1
SE_02_136200481 chr22:29615155-29628459 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 481 5 297 26 0 54 0 NF2,NIPSNAP1
SE_02_113700149 chr22:29615211-29646379 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 149 9 723 52 0 168 225 NF2,NIPSNAP1
SE_02_011200244 chr22:29615348-29635718 Sample_02_0112 Connective tissue HT1080_untreated 244 2 453 28 0 100 56 NF2,NIPSNAP1
SE_02_072700348 chr22:29615399-29633914 Sample_02_0727 Fetal lung IMR90_Etoposide 348 3 400 27 0 97 56 NF2,NIPSNAP1
SE_02_086500428 chr22:29615486-29643056 Sample_02_0865 Malignant rhaboid tumor TTC1240_SMARCB1_R377H 428 15 621 41 0 163 225 NF2,NIPSNAP1
SE_02_044800817 chr22:29615509-29644995 Sample_02_0448 Bone MNNG 817 18 681 48 0 163 225 NF2,NIPSNAP1
SE_02_088100475 chr22:29615678-29627728 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 475 2 268 24 0 38 0 NF2,NIPSNAP1
SE_02_001300238 chr22:29615878-29637642 Sample_02_0013 Kidney 786-O_HIF2A 238 6 480 31 0 117 126 NF2,NIPSNAP1
SE_02_043000511 chr22:29615918-29638694 Sample_02_0430 Kidney 12364284 511 11 505 31 0 129 126 NF2,NIPSNAP1
SE_02_084600781 chr22:29615982-29633405 Sample_02_0846 Mammary gland MDA-MB-231_untreat 781 7 379 27 0 97 56 NF2,NIPSNAP1
SE_02_087800341 chr22:29616065-29633635 Sample_02_0878 Ovary SVOG3e cells_noDox_control 341 2 383 27 0 97 56 NF2,NIPSNAP1
SE_02_076601290 chr22:29616066-29648868 Sample_02_0766 Ovary PEO1 1290 7 750 57 0 173 225 NF2,NIPSNAP1,THOC5
SE_02_136100607 chr22:29616115-29627974 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 607 3 265 25 0 50 0 NF2,NIPSNAP1
SE_02_065900436 chr22:29616122-29626910 Sample_02_0659 Lung H23 436 1 240 22 0 33 0 NF2,NIPSNAP1
SE_02_038000557 chr22:29616204-29627004 Sample_02_0380 Skeletal muscle RH18 557 4 242 24 0 33 0 NF2,NIPSNAP1
SE_02_010800387 chr22:29616434-29638084 Sample_02_0108 Fallopian tube FT246 387 3 476 31 0 119 126 NF2,NIPSNAP1
SE_02_158200177 chr22:29616454-29638229 Sample_02_1582 Renal OS-RC-2 177 9 480 31 0 129 126 NF2,NIPSNAP1,THOC5,CABP7
SE_02_139900179 chr22:29616497-29634620 Sample_02_1399 Bone U2OS_siMLL3.1 179 8 396 27 0 99 56 NF2,NIPSNAP1
SE_02_114900217 chr22:29616647-29637316 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 217 5 465 31 0 117 126 NF2,NIPSNAP1
SE_02_013300180 chr22:29616666-29624677 Sample_02_0133 Thymus TC-797_JQ1_4h 180 3 180 20 0 28 0 NF2,NIPSNAP1
SE_02_048001079 chr22:29616764-29626643 Sample_02_0480 Gingival epithelial HGEP 1079 6 223 22 0 33 0 NF2,NIPSNAP1,THOC5,UQCR10
SE_02_087900379 chr22:29616819-29635236 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 379 3 407 28 0 100 56 NF2,NIPSNAP1
SE_02_088000422 chr22:29616890-29627050 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 422 1 229 24 0 33 0 NF2,NIPSNAP1
SE_02_111000444 chr22:29616899-29626602 Sample_02_1110 Other HGrC1 444 5 221 22 0 33 0 NF2,NIPSNAP1
SE_02_126500783 chr22:29616938-29628611 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 783 1 264 26 0 55 10 NF2,NIPSNAP1
SE_02_107300461 chr22:29616982-29627902 Sample_02_1073 Keratinocyte keratinocytes stem cell 461 4 246 24 0 48 0 NF2,NIPSNAP1
SE_02_126200685 chr22:29616996-29629982 Sample_02_1262 Bone Im-GCT-3504_G34W 685 10 293 26 0 59 56 NF2,NIPSNAP1
SE_02_066100920 chr22:29617001-29627828 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 920 8 245 24 0 44 0 NF2,NIPSNAP1
SE_02_064700863 chr22:29617006-29635133 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 863 10 399 28 0 100 56 NF2,NIPSNAP1
SE_02_094700610 chr22:29617009-29627596 Sample_02_0947 Tongue Cal27 610 3 238 24 0 38 0 NF2,NIPSNAP1
SE_02_072600233 chr22:29617029-29626470 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 233 8 217 22 0 33 0 NF2,NIPSNAP1
SE_02_126600637 chr22:29617036-29628053 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 637 2 250 25 0 52 0 NF2,NIPSNAP1
SE_02_027400866 chr22:29617043-29634924 Sample_02_0274 Endometriosis hTERT_KD 866 2 393 27 0 100 56 NF2,NIPSNAP1
SE_02_151400551 chr22:29617062-29630150 Sample_02_1514 Lung Differentiated AT1-like cells 551 4 295 26 0 61 56 NF2,NIPSNAP1
SE_01_001900381 chr22:29617075-29635154 Sample_01_0019 Brain and spinal cord astrocyte 381 3 400 28 0 100 56 NF2,NIPSNAP1
SE_02_111500287 chr22:29617085-29635144 Sample_02_1115 Liver HepG2 287 7 399 28 0 100 56 NF2,NIPSNAP1
SE_02_105200490 chr22:29617172-29625391 Sample_02_1052 Esophagus JH-EsoAd1 490 8 190 20 0 28 0 NF2,NIPSNAP1
SE_02_008000309 chr22:29617174-29634079 Sample_02_0080 Lung Calu-3 309 6 373 27 0 97 56 NF2,NIPSNAP1
SE_02_125900620 chr22:29617199-29627935 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 620 6 244 24 0 48 0 NF2,NIPSNAP1
SE_02_060500562 chr22:29617248-29628602 Sample_02_0605 Skin Skin Fibroblast_DMSO 562 4 261 26 0 55 9 NF2,NIPSNAP1
SE_02_151300695 chr22:29617250-29630971 Sample_02_1513 Lung Transitional AT2->1 cells 695 4 311 27 0 71 56 NF2,NIPSNAP1
SE_02_094600342 chr22:29617328-29627451 Sample_02_0946 Tongue HN12 342 1 232 24 0 38 0 NF2,NIPSNAP1
SE_02_112100538 chr22:29617336-29627270 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 538 8 229 24 0 36 0 NF2,NIPSNAP1
SE_02_093600198 chr22:29617337-29633804 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 198 2 363 27 0 97 56 NF2,NIPSNAP1
SE_02_126100910 chr22:29617340-29629816 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 910 9 285 26 0 59 56 NF2,NIPSNAP1
SE_02_126000951 chr22:29617363-29627258 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 951 6 229 24 0 36 0 NF2,NIPSNAP1
SE_02_111300096 chr22:29617365-29634742 Sample_02_1113 Bone U2OS 96 7 383 27 0 100 56 NF2,NIPSNAP1
SE_02_053100176 chr22:29617369-29635895 Sample_02_0531 Mammary gland MDA-MB-231 176 12 424 28 0 101 56 NF2,NIPSNAP1
SE_02_108500355 chr22:29617370-29635739 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 355 12 418 28 0 101 56 NF2,NIPSNAP1
SE_02_126301616 chr22:29617395-29626927 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1616 4 218 22 0 33 0 NF2,NIPSNAP1
SE_02_135700484 chr22:29617424-29627648 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 484 7 237 24 0 38 0 NF2,NIPSNAP1
SE_02_003000395 chr22:29617427-29623849 Sample_02_0030 Kidney human kidney proximal tubule cells 395 4 151 20 0 28 0 NF2,NIPSNAP1
SE_02_060600497 chr22:29617512-29642226 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 497 8 565 41 0 156 195 NF2,NIPSNAP1
SE_02_135800574 chr22:29617514-29627474 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 574 5 229 24 0 38 0 NF2,NIPSNAP1
SE_02_137900499 chr22:29617514-29633584 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 499 8 355 27 0 97 56 NF2,NIPSNAP1
SE_02_135900670 chr22:29617535-29627895 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 670 3 238 24 0 48 0 NF2,NIPSNAP1
SE_02_127200221 chr22:29617645-29636143 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 221 19 422 28 0 101 56 NF2,NIPSNAP1
SE_02_144600181 chr22:29617651-29628084 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 181 5 242 25 0 52 0 NF2,NIPSNAP1
SE_02_126900621 chr22:29617682-29627079 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 621 2 217 24 0 33 0 NF2,NIPSNAP1
SE_02_145201275 chr22:29617868-29627836 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1275 5 225 22 0 46 0 NF2,NIPSNAP1
SE_02_112000569 chr22:29617906-29626404 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 569 7 194 20 0 33 0 NF2,NIPSNAP1
SE_02_137800674 chr22:29617993-29642995 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 674 10 571 39 0 163 225 NF2,NIPSNAP1
SE_02_135500782 chr22:29617998-29627775 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 782 2 222 22 0 38 0 NF2,NIPSNAP1
SE_02_113300843 chr22:29618055-29627750 Sample_02_1133 Liver Hepatic stellate cells 843 4 221 22 0 38 0 NF2,NIPSNAP1
SE_02_157100617 chr22:29618218-29627974 Sample_02_1571 Fibroblast Fibroblast cells 617 2 222 23 0 47 0 NF2,NIPSNAP1
SE_02_145500902 chr22:29618349-29627746 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 902 3 216 22 0 34 0 NF2,NIPSNAP1
SE_02_047401204 chr22:29618464-29642990 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1204 7 561 39 0 157 225 NF2,NIPSNAP1
SE_02_113400105 chr22:29618552-29633585 Sample_02_1134 Bone U2OS-interphase 105 4 329 24 0 86 56 NF2,NIPSNAP1
SE_02_065201184 chr22:29618554-29635312 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1184 10 373 25 0 89 56 NF2,NIPSNAP1
SE_02_026400938 chr22:29618607-29627934 Sample_02_0264 Skeletal muscle 7250-empty 938 1 211 20 0 33 0 NF2,NIPSNAP1
SE_02_084700357 chr22:29618624-29633650 Sample_02_0847 Mammary gland LM2-4175 357 6 330 23 0 79 56 NF2,NIPSNAP1
SE_02_099000166 chr22:29618842-29635825 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 166 5 389 24 0 80 56 NF2,NIPSNAP1
SE_02_057000508 chr22:29618870-29634960 Sample_02_0570 Brain LN229_10_mM_glucose 508 11 356 24 0 77 56 NF2,NIPSNAP1
SE_02_099100515 chr22:29618920-29626721 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 515 3 182 18 0 10 0 NF2,NIPSNAP1
SE_02_153600148 chr22:29618960-29635753 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 148 11 384 24 0 78 56 NF2,NIPSNAP1
SE_02_136400306 chr22:29618999-29626699 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 306 4 182 18 0 10 0 NF2,NIPSNAP1
SE_02_132500487 chr22:29619007-29631705 Sample_02_1325 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M_WT 487 8 286 23 0 59 56 NF2,NIPSNAP1
SE_02_113500036 chr22:29619234-29624571 Sample_02_1135 Bone U2OS-prometaphase 36 6 128 16 0 5 0 NF2,NIPSNAP1
SE_02_011300214 chr22:29619316-29635464 Sample_02_0113 Connective tissue HT1080_DOX5d 214 2 370 24 0 77 56 NF2,NIPSNAP1
SE_02_153400228 chr22:29619565-29635362 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 228 4 355 20 0 77 56 NF2,NIPSNAP1
SE_02_093900439 chr22:29619727-29625735 Sample_02_0939 Mammary gland MDA-MB-231_control 439 2 146 11 0 8 0 NF2,NIPSNAP1
SE_02_074100825 chr22:29619783-29633879 Sample_02_0741 Muscle RH30 825 3 310 17 0 74 56 NF2,NIPSNAP1
SE_02_132700133 chr22:29619841-29635551 Sample_02_1327 Hindbrain Hindbrain derived neural stem cells_NS13_H3.3K27M_WT 133 10 356 18 0 76 56 NF2,NIPSNAP1
SE_02_153700390 chr22:29619960-29635793 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 390 7 367 18 0 77 56 NF2,NIPSNAP1
SE_02_094200162 chr22:29620129-29633717 Sample_02_0942 Brain LN229 162 7 301 16 0 73 56 NF2,NIPSNAP1
SE_02_106600047 chr22:29620476-29625154 Sample_02_1066 Bone U2-OS 47 4 115 8 0 4 0 NF2,NIPSNAP1
SE_02_094300237 chr22:29620575-29634815 Sample_02_0943 Brain LNZ308 237 6 317 14 0 76 56 NF2,NIPSNAP1
SE_01_002600620 chr22:29620616-29635475 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 620 5 338 15 0 76 56 NF2,NIPSNAP1
SE_02_153500444 chr22:29620722-29635133 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 444 8 320 15 0 76 56 NF2,NIPSNAP1
SE_02_046900142 chr22:29620827-29637280 Sample_02_0469 Kidney 786-O PBRM1 shRNA#2 142 7 376 18 0 93 126 NF2,NIPSNAP1
SE_02_046700071 chr22:29621220-29633867 Sample_02_0467 Kidney 786-O_control 71 9 276 11 0 73 56 NF2,NIPSNAP1
Genomic distribution of SEs associated with NIPSNAP1
Genome Browser

The strength of the tissue affected by the gene

Expression of NIPSNAP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)