SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000112651
Gene: MRPL2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr6:43054029-43059438 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_074501142 chr6:43014176-43017973 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1142 1 79 1 1 56 339 KLHDC3,KLC4,PPP2R5D,MEA1,CUL7,PEX6,MRPL2,RRP36
SE_02_114500857 chr6:43062821-43096205 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 857 9 851 74 3 170 1514 KLC4,PTK7,KLHDC3,MEA1,CUL7,MRPL2,RRP36
SE_02_103200156 chr6:43063587-43128724 Sample_02_1032 Head and neck SCC1 JQ1 156 29 1658 149 3 237 1416 KLC4,PTK7,RRP36,SRF,KLHDC3,MEA1,CUL7,MRPL2
SE_02_143200462 chr6:43069415-43147154 Sample_02_1432 Bone A673 STAG2 WT 462 34 2018 159 3 313 2665 PTK7,KLC4,SRF,CUL9,CUL7,MRPL2,RRP36
SE_01_005700416 chr6:43070040-43130347 Sample_01_0057 Pancreas duct PANC-1 416 9 1542 124 3 238 1397 KLC4,PTK7,CUL7,SRF,RRP36,MRPL2
SE_02_040900295 chr6:43070042-43098459 Sample_02_0409 Kidney G401_NoDox 295 8 715 48 3 166 1119 KLC4,PTK7,CUL7,RRP36,MRPL2
SE_02_045300246 chr6:43070071-43146927 Sample_02_0453 Neuroblastoma SJNB3 246 27 1994 155 3 313 2665 PTK7,KLC4,SRF,CUL9,CUL7,MRPL2,RRP36
SE_02_040800322 chr6:43070158-43099344 Sample_02_0408 Kidney G401_Dox 322 11 729 49 3 166 1119 KLC4,PTK7,CUL7,RRP36,MRPL2
SE_02_101700180 chr6:43070249-43129775 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 180 15 1513 124 3 227 1264 PTK7,KLC4,SRF,CUL7,MRPL2,RRP36,SLC22A7,TTBK1
SE_02_147600476 chr6:43070259-43098343 Sample_02_1476 Bone EW-1 476 12 704 47 3 166 1098 PTK7,KLC4,CUL7,MRPL2,RRP36
SE_02_156000388 chr6:43070359-43128724 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 388 14 1482 121 3 221 1078 PTK7,KLC4,SRF,CUL7,MRPL2,RRP36
SE_02_044400345 chr6:43070379-43129988 Sample_02_0444 Bone osteosarcoma tumor P10 345 17 1517 123 3 232 1277 PTK7,KLC4,SRF,CUL7,MRPL2,RRP36
SE_02_101600130 chr6:43070429-43129776 Sample_02_1016 Embryo H9_Mesendoderm_24h 130 13 1508 123 3 225 1230 PTK7,KLC4,SRF,CUL7,MRPL2,RRP36,SLC22A7,TTBK1
SE_02_111200109 chr6:43070437-43164808 Sample_02_1112 T lymphocyte THP-6 T-ALL 109 36 2437 208 3 324 3104 PTK7,KLC4,SRF,CUL9,CUL7,MRPL2,RRP36
SE_01_009100606 chr6:43070635-43098741 Sample_01_0091 Uterus uterus 606 4 703 47 3 164 1040 KLC4,PTK7,CUL7,RRP36,MRPL2
SE_02_110000151 chr6:43071430-43143554 Sample_02_1100 Brain COG-N-415 151 29 1862 145 3 290 2064 PTK7,KLC4,SRF,CUL9,CUL7,MRPL2,RRP36
SE_02_033000017 chr6:43071632-43150955 Sample_02_0330 Endoderm MHG 17 19 2066 162 3 299 2390 KLC4,PTK7,CUL9,CUL7,SRF,RRP36,MRPL2
SE_00_001500520 chr6:43073588-43098417 Sample_00_0015 Lung IMR-90 520 3 621 40 3 139 544 KLC4,PTK7,CUL7,MRPL2
SE_02_148300825 chr6:43073610-43097003 Sample_02_1483 Bone RD-ES 825 8 586 36 3 129 544 PTK7,KLC4,CUL7,MRPL2
SE_02_004000695 chr6:43073628-43097566 Sample_02_0040 Embryo PFG 695 4 599 36 3 137 544 KLC4,PTK7,CUL7,MRPL2
SE_02_024400198 chr6:43073944-43098347 Sample_02_0244 Foreskin foreskin_D11 198 7 602 39 3 139 504 KLC4,PTK7,CUL7,MRPL2
SE_02_075600632 chr6:43074222-43104504 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 632 4 755 55 3 138 469 PTK7,KLC4,CUL7,MRPL2
SE_02_026400847 chr6:43074317-43098320 Sample_02_0264 Skeletal muscle 7250-empty 847 4 597 39 3 138 469 KLC4,PTK7,CUL7,MRPL2
SE_02_031200379 chr6:43074401-43144586 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 379 9 1817 145 3 283 1764 KLC4,PTK7,CUL9,CUL7,SRF,MRPL2
SE_01_007200680 chr6:43074435-43127768 Sample_01_0072 Breast epithelium breast-epithelium 680 8 1349 110 3 192 466 KLC4,PTK7,CUL7,SRF,MRPL2
SE_02_097200427 chr6:43074484-43125239 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 427 11 1287 104 3 180 457 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_031000068 chr6:43074647-43144666 Sample_02_0310 Neuroblastoma SJNB8 68 12 1812 145 3 285 1734 KLC4,PTK7,CUL9,CUL7,SRF,MRPL2
SE_02_063700685 chr6:43074668-43097701 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 685 6 578 36 3 137 424 PTK7,KLC4,CUL7,MRPL2
SE_02_060600768 chr6:43074673-43098181 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 768 6 587 37 3 138 423 PTK7,KLC4,CUL7,MRPL2
SE_02_060501079 chr6:43074856-43097954 Sample_02_0605 Skin Skin Fibroblast_DMSO 1079 9 580 36 3 135 371 PTK7,KLC4,CUL7,MRPL2
SE_02_003800743 chr6:43074996-43126949 Sample_02_0038 Embryo DE 743 7 1317 109 3 188 342 KLC4,PTK7,CUL7,SRF,MRPL2
SE_01_002100160 chr6:43075012-43125381 Sample_01_0021 Skin bipolar-neuron 160 7 1285 104 3 185 339 KLC4,PTK7,CUL7,SRF,MRPL2
SE_02_004700422 chr6:43075128-43127743 Sample_02_0047 Pancreatic endoderm IIDP/donor790 422 11 1337 110 3 189 322 PTK7,CUL7,KLC4,SRF,MRPL2
SE_02_005600581 chr6:43075360-43098519 Sample_02_0056 Mammary gland HMEC 581 5 586 39 3 121 292 PTK7,CUL7,KLC4,MRPL2
SE_02_009500448 chr6:43075436-43098694 Sample_02_0095 Mammary gland MDA-MB-468 448 4 587 39 3 116 292 PTK7,CUL7,KLC4,MRPL2
SE_02_006300266 chr6:43075577-43124555 Sample_02_0063 Skin Keratinocytes 266 7 1248 101 3 147 292 PTK7,CUL7,KLC4,SRF,MRPL2
SE_02_021100100 chr6:43076262-43127321 Sample_02_0211 Lung MRC-5_NFD_1DPT 100 9 1302 109 3 146 226 PTK7,CUL7,KLC4,SRF,MRPL2
SE_02_003900336 chr6:43076264-43098471 Sample_02_0039 Embryo AFG 336 4 567 39 3 92 225 PTK7,CUL7,KLC4,MRPL2
SE_00_002400383 chr6:43076279-43097657 Sample_00_0024 Embryo mesendoderm 383 3 547 36 3 89 221 PTK7,CUL7,KLC4,MRPL2
SE_02_075501071 chr6:43076315-43126756 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1071 7 1291 109 3 141 213 PTK7,KLC4,SRF,CUL7,MRPL2
SE_01_006600475 chr6:43076320-43098333 Sample_01_0066 Smooth muscle smooth-muscle-cell 475 6 562 38 3 90 211 PTK7,CUL7,KLC4,MRPL2
SE_02_044500466 chr6:43076359-43129865 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 466 20 1372 115 3 157 385 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_156600292 chr6:43076367-43129837 Sample_02_1566 Dermal Dermal fibroblast 292 14 1372 115 3 157 375 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_004300712 chr6:43076394-43097433 Sample_02_0043 Embryo endodermal CyT49_ES_D2 712 3 542 35 3 88 194 PTK7,CUL7,KLC4,MRPL2
SE_02_003301182 chr6:43076399-43128685 Sample_02_0033 Pancreas pancreatic-islets-F 1182 10 1341 113 3 145 194 PTK7,CUL7,KLC4,SRF,MRPL2
SE_00_002300836 chr6:43076421-43098443 Sample_00_0023 Embryo mesenchymal-stem-cell 836 3 567 39 3 90 189 PTK7,CUL7,KLC4,MRPL2
SE_02_088600975 chr6:43076429-43099667 Sample_02_0886 Skin foreskin_ p63KLF4 975 7 591 41 3 90 186 PTK7,KLC4,CUL7,MRPL2
SE_02_006500335 chr6:43077305-43117385 Sample_02_0065 Embryo KO2-Late_G1 335 6 1020 78 3 110 0 PTK7,CUL7,KLC4,MRPL2
SE_02_041700416 chr6:43078103-43090214 Sample_02_0417 Embryo H9_Null 416 2 308 26 2 34 0 PTK7,CUL7,KLC4,MRPL2
SE_02_110400313 chr6:43078770-43129882 Sample_02_1104 Brain NB-69 313 10 1296 110 2 124 189 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_110600349 chr6:43078918-43147547 Sample_02_1106 Brain NGP 349 26 1792 144 2 204 1546 PTK7,KLC4,SRF,CUL9,CUL7,MRPL2
SE_02_051800069 chr6:43079634-43129852 Sample_02_0518 Esophagus TT_Esophagus carcinoma 69 22 1284 109 2 124 184 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_050800070 chr6:43079657-43129852 Sample_02_0508 Esophagus TT_1 70 20 1283 109 2 124 184 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_151200579 chr6:43081515-43098341 Sample_02_1512 Lung Purified AT2 cells 579 6 424 29 2 57 0 PTK7,KLC4,CUL7,MRPL2
SE_02_151400843 chr6:43081535-43097641 Sample_02_1514 Lung Differentiated AT1-like cells 843 5 407 27 2 55 0 PTK7,KLC4,CUL7,MRPL2
SE_02_151300858 chr6:43081571-43098326 Sample_02_1513 Lung Transitional AT2->1 cells 858 7 423 29 2 57 0 PTK7,KLC4,CUL7,MRPL2
SE_02_053000896 chr6:43081832-43122589 Sample_02_0530 Mammary gland MCF10A 896 11 1032 84 1 98 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_032800579 chr6:43082765-43098599 Sample_02_0328 Embryo H9_naive 579 3 395 26 1 57 0 PTK7,CUL7,KLC4,MRPL2
SE_02_074400124 chr6:43083094-43125261 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 124 14 1069 88 1 102 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_153300627 chr6:43083141-43098389 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 627 6 376 23 1 54 0 PTK7,KLC4,CUL7,MRPL2
SE_02_074300348 chr6:43083212-43124150 Sample_02_0743 Embryo ES derived mesoderm_day2 348 17 1034 82 1 92 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_105100159 chr6:43085087-43130068 Sample_02_1051 Esophagus Eso26 159 14 1142 96 1 110 222 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_103100261 chr6:43085310-43128769 Sample_02_1031 Head and neck SCC1 contol 261 24 1100 94 1 98 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_106000758 chr6:43085925-43115665 Sample_02_1060 Bone TC71_SA2 KO 758 6 732 55 1 73 0 PTK7,KLC4,CUL7,MRPL2
SE_02_101500467 chr6:43087123-43129766 Sample_02_1015 Embryo H9_ Undifferentiated 467 13 1064 91 1 98 162 PTK7,KLC4,SRF,CUL7,MRPL2,SLC22A7,TTBK1
SE_02_064701160 chr6:43087128-43098342 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1160 6 255 14 1 37 0 PTK7,KLC4,CUL7,MRPL2
SE_02_065200940 chr6:43087392-43097926 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 940 5 247 12 1 37 0 PTK7,KLC4,CUL7,MRPL2
SE_02_066000551 chr6:43087420-43129857 Sample_02_0660 Mammary gland MCF10DCIS 551 18 1063 91 1 104 184 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_066100369 chr6:43088068-43123150 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 369 11 872 73 1 78 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_108600903 chr6:43088415-43104022 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 903 4 375 29 1 37 0 PTK7,KLC4,CUL7,MRPL2
SE_02_064401181 chr6:43088503-43097476 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 1181 5 211 11 1 35 0 PTK7,KLC4,CUL7,MRPL2
SE_02_038100751 chr6:43088682-43127813 Sample_02_0381 Heart purified cardiomyocyte WT 751 5 978 85 1 91 0 PTK7,CUL7,KLC4,SRF,MRPL2
SE_02_003600432 chr6:43088706-43126973 Sample_02_0036 Embryo H7 432 12 954 84 1 90 0 PTK7,CUL7,KLC4,SRF,MRPL2
SE_02_006400630 chr6:43088707-43115216 Sample_02_0064 Embryo DN-Early_G1 630 4 652 51 1 67 0 PTK7,CUL7,KLC4,MRPL2
SE_00_001200476 chr6:43088729-43096995 Sample_00_0012 Embryo H1-hESC 476 2 192 10 1 26 0 PTK7,CUL7,KLC4,MRPL2
SE_02_157001108 chr6:43088762-43123567 Sample_02_1570 iPSCs EiPSC 1108 11 863 73 1 78 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_055900857 chr6:43088788-43097396 Sample_02_0559 iPSCs FX52 iPSCs dC-T 857 5 203 10 1 35 0 PTK7,KLC4,CUL7,MRPL2
SE_00_001000352 chr6:43088791-43126061 Sample_00_0010 Embryo endodermal-cell 352 7 933 80 1 87 0 PTK7,CUL7,KLC4,SRF,MRPL2
SE_02_156701075 chr6:43088858-43115598 Sample_02_1567 iPSCs CiPSC 1075 8 662 51 1 67 0 PTK7,KLC4,CUL7,MRPL2
SE_02_152700113 chr6:43088893-43126162 Sample_02_1527 Embryo naive embryonic stem cell 113 12 934 80 1 87 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_067200700 chr6:43088939-43127656 Sample_02_0672 Endometrium endometrium cancer_DSG 700 10 969 83 1 91 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_157200807 chr6:43088950-43124135 Sample_02_1572 iPSCs FiPSC 807 12 882 73 1 78 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_068400358 chr6:43088995-43115876 Sample_02_0684 Lung DMS79 358 6 665 50 1 67 0 PTK7,KLC4,CUL7,MRPL2
SE_02_056000655 chr6:43089046-43096474 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 655 3 172 9 1 18 0 PTK7,KLC4,CUL7,MRPL2
SE_02_123900077 chr6:43089181-43124530 Sample_02_1239 Skin Waga_virus_positive 77 23 889 75 1 78 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_123700043 chr6:43089233-43127172 Sample_02_1237 Skin MKL2_virus_positive 43 17 950 83 1 91 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_059401094 chr6:43089234-43129422 Sample_02_0594 iPSC-derived neural progenitors 1094 9 1015 88 1 97 118 PTK7,KLC4,SRF,CUL7,MRPL2,KLHDC3
SE_02_069300141 chr6:43089296-43128433 Sample_02_0693 Lung NCI-H69_no infection 141 15 986 86 1 92 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_041800070 chr6:43089310-43115013 Sample_02_0418 Embryo H9_Null+EZH2 70 4 641 50 1 63 0 PTK7,CUL7,KLC4,MRPL2
SE_02_067401062 chr6:43089328-43098705 Sample_02_0674 Endometrium E1_FA 1062 2 223 13 1 37 0 PTK7,KLC4,CUL7,MRPL2
SE_02_144300100 chr6:43089344-43129641 Sample_02_1443 Lung H69M 100 13 1020 88 1 97 136 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_138400545 chr6:43089358-43126485 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 545 10 936 82 1 87 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_085701331 chr6:43089395-43127638 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 1331 8 961 83 1 91 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_074700393 chr6:43089461-43148066 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 393 19 1536 126 1 184 1546 PTK7,KLC4,SRF,CUL9,CUL7,MRPL2
SE_02_021400023 chr6:43089601-43097458 Sample_02_0214 Embryo H9_WT 23 2 187 7 1 34 0 PTK7,CUL7,KLC4,MRPL2
SE_02_144200122 chr6:43089617-43129916 Sample_02_1442 Lung H69 122 14 1020 87 1 103 195 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_116000106 chr6:43089692-43144744 Sample_02_1160 Embryo H1_shLuc 106 15 1429 118 1 183 1323 PTK7,KLC4,SRF,CUL9,CUL7,MRPL2,TTBK1
SE_02_123600161 chr6:43089732-43124640 Sample_02_1236 Skin MKL1_virus_positive 161 14 878 74 1 77 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_083800534 chr6:43093251-43114393 Sample_02_0838 Embryo hNPCs_WT 534 5 538 44 0 44 0 PTK7,KLC4,CUL7,MRPL2,KLHDC3
SE_02_109900758 chr6:43093311-43122610 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 758 9 751 64 0 60 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_098700571 chr6:43093431-43122512 Sample_02_0987 Blood K562_Control_1 571 7 743 63 0 60 0 PTK7,KLC4,SRF,CUL7,MRPL2
SE_02_034100426 chr6:43105008-43130111 Sample_02_0341 Autonomic ganglia SH-SY5Y_untreat 426 5 649 59 0 67 227 PTK7,KLC4,SRF,MRPL2
SE_02_104601431 chr6:43106906-43161094 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1431 16 1438 116 0 159 1884 PTK7,KLC4,SRF,CUL9,MRPL2
Genomic distribution of SEs associated with MRPL2
Genome Browser

The strength of the tissue affected by the gene

Expression of MRPL2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)