SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000225526
Gene: MKRN2OS Gene type: protein_coding
Strand: - External links:
Genomic region: chr3:12514934-12561059 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_046500003 chr3:12286901-12508202 Sample_02_0465 Adipose subcutaneous adipocytes 3 142 5799 545 50 839 1392 PPARG,TSEN2,MKRN2,MKRN2OS
SE_02_085900003 chr3:12287053-12508672 Sample_02_0859 Prostate PC3 3 42 5815 547 50 838 1392 PPARG,TSEN2,MKRN2,MKRN2OS
SE_02_046600392 chr3:12420444-12518483 Sample_02_0466 Adipose visceral adipocytes 392 47 2763 309 26 342 564 PPARG,TSEN2,MKRN2OS,MKRN2
SE_02_131100849 chr3:12475784-12510020 Sample_02_1311 Bone marrow HDMSCs 849 7 1011 141 6 65 437 TSEN2,MKRN2OS,MKRN2
SE_02_131000901 chr3:12475807-12509857 Sample_02_1310 Bone marrow ASMSCs 901 6 1005 140 6 65 437 TSEN2,MKRN2OS,MKRN2
SE_02_143201684 chr3:12553675-12574744 Sample_02_1432 Bone A673 STAG2 WT 1684 6 535 66 3 36 344 MKRN2,MKRN2OS
SE_02_089201181 chr3:12553895-12594695 Sample_02_0892 Heart left ventricle_LV1215 1181 13 1098 109 10 105 1252 RAF1,MKRN2,MKRN2OS
SE_02_158300711 chr3:12553898-12589191 Sample_02_1583 Fetal lung IMR90_empty_GM 711 21 945 95 9 87 1094 RAF1,MKRN2,MKRN2OS
SE_02_090200814 chr3:12554051-12595777 Sample_02_0902 Heart left ventricle_LV1558 814 12 1120 110 10 105 1252 RAF1,MKRN2,MKRN2OS
SE_02_090301168 chr3:12555920-12594538 Sample_02_0903 Heart left ventricle_DCM_LV1009 1168 10 1036 99 9 105 1252 RAF1,MKRN2,MKRN2OS
SE_02_088901307 chr3:12555967-12597941 Sample_02_0889 Heart left ventricle_LV1183 1307 14 1132 109 10 105 1252 RAF1,MKRN2,MKRN2OS
SE_02_090701453 chr3:12556142-12601871 Sample_02_0907 Heart left ventricle_DCM_LV1223 1453 10 1244 117 10 130 1373 RAF1,MKRN2,MKRN2OS
SE_02_090800436 chr3:12558739-12665066 Sample_02_0908 Heart left ventricle_DCM_LV1262 436 30 2850 298 13 210 1683 RAF1,MKRN2,MKRN2OS
SE_02_104901459 chr3:12574498-12662260 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1459 42 2389 243 11 184 1290 RAF1,MKRN2,MKRN2OS
SE_02_103600467 chr3:12593084-12715399 Sample_02_1036 Mammary gland HCC70_XY018 467 52 3443 368 9 117 559 RAF1,MKRN2OS,MKRN2,TMEM40
Genomic distribution of SEs associated with MKRN2OS
Genome Browser

The strength of the tissue affected by the gene

Expression of MKRN2OS

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)