SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_085900003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Prostate
Biosample name: PC3
Genomic region: chr3:12287053-12508672
Size: 221619
Super-enhancer rank 3
Number of SE elements: 42
ChIP density(Case|Control): 420632.862|35614.1733
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPARG;
ROSE Overlap PPARG; TSEN2;
ROSE Proximal MKRN2; MKRN2OS; TSEN2;
ROSE Closest PPARG;
Lasso MKRN2OS; MKRN2;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_085900003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers