SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000264539
Gene: MIR548AR Gene type: miRNA
Strand: + External links:
Genomic region: chr13:114244505-114244561 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104301585 chr13:114194992-114238700 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1585 15 1283 228 0 16 237 CDC16,MIR548AR,MIR4502,UPF3A
SE_02_104603352 chr13:114202555-114238672 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 3352 13 1075 206 0 14 237 CDC16,MIR548AR,MIR4502,UPF3A
SE_02_109500753 chr13:114219283-114237548 Sample_02_1095 Blood CD34 Erythroid cells_Don002 753 5 564 112 0 11 237 CDC16,MIR548AR,MIR4502,UPF3A
SE_02_122200097 chr13:114257354-114283311 Sample_02_1222 Bone marrow KMS12 97 7 788 136 1 39 520 CDC16,MIR4502,UPF3A,MIR548AR,CHAMP1
SE_02_111200426 chr13:114260836-114299725 Sample_02_1112 T lymphocyte THP-6 T-ALL 426 11 1308 207 0 48 711 CDC16,MIR4502,UPF3A,MIR548AR,CHAMP1,LINC01054
SE_02_127901471 chr13:114262943-114293920 Sample_02_1279 Bone Mesenchymal stem cells 1471 7 994 167 0 45 599 CDC16,MIR4502,UPF3A,MIR548AR,CHAMP1,LINC01054
SE_02_075201155 chr13:114276699-114283285 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1155 1 210 49 0 13 294 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_075501152 chr13:114276830-114283254 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1152 2 208 49 0 13 292 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_122100486 chr13:114277416-114283230 Sample_02_1221 Bone marrow KMS11 486 3 189 44 0 13 287 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_054501108 chr13:114278684-114283381 Sample_02_0545 Bone marrow K562 WT 1108 1 157 36 0 13 306 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_074500526 chr13:114278719-114284261 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 526 2 186 40 0 14 347 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
SE_02_133200417 chr13:114279173-114296360 Sample_02_1332 Blood Monomac6_CTRL 417 5 642 88 0 25 469 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
SE_02_057500485 chr13:114279188-114283163 Sample_02_0575 Blood MOLM13_sgLKB1e2 485 1 139 30 0 13 279 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_057800502 chr13:114279243-114283150 Sample_02_0578 Blood MOLM-13_sgSIK3e4 502 1 137 30 0 13 274 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_057400549 chr13:114279270-114283306 Sample_02_0574 Blood MOLM-13_sgNeg2 549 1 138 31 0 13 303 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_101701381 chr13:114279285-114297929 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1381 5 693 97 0 25 469 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
SE_02_057700591 chr13:114279308-114283250 Sample_02_0577 Blood MOLM13_empty 591 1 136 31 0 13 292 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_058200630 chr13:114279373-114283294 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 630 1 135 31 0 13 299 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_058100612 chr13:114279482-114283239 Sample_02_0581 Blood MOLM13_empty_HG 612 1 131 31 0 13 289 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_102800394 chr13:114279504-114282855 Sample_02_1028 Blood HL-60_WT 394 1 122 30 0 12 251 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_126500995 chr13:114279904-114288619 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 995 3 294 42 0 18 425 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
Genomic distribution of SEs associated with MIR548AR
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR548AR

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)