SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_126500995
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: Im-GCT-4072_G34W-repair_WT_D6
Genomic region: chr13:114279904-114288619
Size: 8715
Super-enhancer rank 995
Number of SE elements: 3
ChIP density(Case|Control): 21960.057|1175.6535
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UPF3A;
ROSE Overlap UPF3A;
ROSE Proximal MIR4502; CDC16; MIR548AR; CHAMP1; LINC01054;
ROSE Closest UPF3A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_126500995 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers