Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | |
| Gene: | MIR1280 | Gene type: | |
| Strand: | External links: |
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| Genomic region: | :- | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_022600431 | chr3:128306758-128329300 |
Sample_02_0226 | Blood | KOPTK1 | 431 | 1 | 608 | 37 | 8 | 62 | 0 | EEFSEC,MIR1280 |
| SE_02_034900380 | chr3:128306783-128328239 |
Sample_02_0349 | Peripheral blood | CUTLL1_dimer-mutant | 380 | 3 | 578 | 35 | 7 | 62 | 0 | EEFSEC,MIR1280 |
| SE_02_034800295 | chr3:128306794-128328824 |
Sample_02_0348 | Peripheral blood | CUTLL1_wild-type | 295 | 1 | 595 | 37 | 8 | 62 | 0 | EEFSEC,MIR1280 |
| SE_02_003400254 | chr3:128306875-128330817 |
Sample_02_0034 | Peripheral blood | CUTLL1_GSI | 254 | 6 | 652 | 37 | 8 | 66 | 0 | EEFSEC,MIR1280 |
| SE_02_003500106 | chr3:128306878-128334549 |
Sample_02_0035 | Peripheral blood | CUTLL1_GSI_wash | 106 | 2 | 726 | 40 | 9 | 73 | 0 | EEFSEC,MIR1280 |
| SE_02_021101055 | chr3:128313728-128355040 |
Sample_02_0211 | Lung | MRC-5_NFD_1DPT | 1055 | 8 | 1043 | 59 | 14 | 141 | 196 | EEFSEC,MIR1280 |
| SE_01_007100186 | chr3:128316818-128355335 |
Sample_01_0071 | Pancreas | body-of-pancreas | 186 | 7 | 968 | 51 | 14 | 131 | 196 | EEFSEC,MIR1280 |
| SE_02_016900276 | chr3:128319380-128351226 |
Sample_02_0169 | Prostate | LNCaP_R1881 | 276 | 7 | 767 | 43 | 14 | 85 | 196 | EEFSEC,MIR1280 |
| SE_01_000100091 | chr3:128319420-128350890 |
Sample_01_0001 | Prostate | 22Rv1 | 91 | 6 | 757 | 42 | 14 | 81 | 196 | EEFSEC,MIR1280 |
| SE_02_017000343 | chr3:128319433-128351192 |
Sample_02_0170 | Prostate | LNCaP_R1881_DOX | 343 | 6 | 763 | 43 | 14 | 81 | 196 | EEFSEC,MIR1280 |
| SE_01_002200035 | chr3:128320702-128350980 |
Sample_01_0022 | Prostate | C4-2B | 35 | 4 | 734 | 38 | 13 | 75 | 196 | EEFSEC,MIR1280 |
| SE_02_016200031 | chr3:128322313-128351180 |
Sample_02_0162 | Prostate | C4-2B_vehicle_24h | 31 | 7 | 704 | 38 | 13 | 75 | 196 | EEFSEC,MIR1280 |
| SE_02_016800502 | chr3:128322510-128351464 |
Sample_02_0168 | Prostate | LNCaP | 502 | 5 | 704 | 38 | 13 | 76 | 196 | EEFSEC,MIR1280 |
| SE_01_000200137 | chr3:128322969-128350785 |
Sample_01_0002 | Prostate | 22Rv1_10nM17beta-hydroxy-5alpha-androstan-3-one | 137 | 6 | 677 | 37 | 13 | 75 | 196 | EEFSEC,MIR1280 |
| SE_02_016300059 | chr3:128323162-128350787 |
Sample_02_0163 | Prostate | C4-2B_SR2211_24h | 59 | 8 | 674 | 36 | 12 | 75 | 196 | EEFSEC,MIR1280 |
| SE_01_006800105 | chr3:128333609-128350412 |
Sample_01_0068 | Prostate: derived from metastatic site: vertebral metastasis | VCaP | 105 | 4 | 417 | 23 | 7 | 63 | 196 | EEFSEC,MIR1280 |
| SE_02_030400264 | chr3:128338192-128359721 |
Sample_02_0304 | Neuroblastoma | N206 | 264 | 1 | 538 | 28 | 6 | 93 | 302 | EEFSEC,MIR1280 |
| SE_02_029600369 | chr3:128364114-128416437 |
Sample_02_0296 | Neuroblastoma | CLB-BER-Lud | 369 | 10 | 1536 | 131 | 5 | 141 | 232 | EEFSEC,MIR1280 |
| SE_00_003401129 | chr3:128365036-128396563 |
Sample_00_0034 | Right cardiac atrium | right-cardiac-atrium | 1129 | 6 | 896 | 70 | 3 | 58 | 0 | EEFSEC,MIR1280,GATA2 |
| SE_02_036700618 | chr3:128365220-128393451 |
Sample_02_0367 | Skeletal muscle | NS129 | 618 | 7 | 800 | 64 | 3 | 49 | 0 | EEFSEC,MIR1280 |
| SE_02_033900028 | chr3:128369700-128436507 |
Sample_02_0339 | Neuroblastoma | NGP | 28 | 10 | 2021 | 176 | 6 | 190 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_016200027 | chr3:128373134-128387914 |
Sample_02_0162 | Prostate | C4-2B_vehicle_24h | 27 | 5 | 401 | 42 | 3 | 49 | 0 | EEFSEC,MIR1280 |
| SE_02_016800588 | chr3:128376311-128387823 |
Sample_02_0168 | Prostate | LNCaP | 588 | 2 | 318 | 34 | 2 | 48 | 0 | EEFSEC,MIR1280 |
| SE_02_031800191 | chr3:128377959-128428757 |
Sample_02_0318 | Neuroblastoma | NB69 | 191 | 8 | 1546 | 127 | 3 | 166 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_01_002200032 | chr3:128378068-128388847 |
Sample_01_0022 | Prostate | C4-2B | 32 | 4 | 313 | 30 | 1 | 48 | 0 | EEFSEC,MIR1280 |
| SE_02_016300036 | chr3:128378627-128387244 |
Sample_02_0163 | Prostate | C4-2B_SR2211_24h | 36 | 5 | 233 | 22 | 1 | 47 | 0 | EEFSEC,MIR1280 |
| SE_01_006800343 | chr3:128378699-128386056 |
Sample_01_0068 | Prostate: derived from metastatic site: vertebral metastasis | VCaP | 343 | 4 | 205 | 14 | 0 | 47 | 0 | EEFSEC,MIR1280 |
| SE_02_031100175 | chr3:128381813-128436078 |
Sample_02_0311 | Neuroblastoma | SK-N-AS | 175 | 6 | 1670 | 151 | 3 | 158 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_030600053 | chr3:128381882-128436893 |
Sample_02_0306 | Autonomic ganglia | SH-SY5Y | 53 | 6 | 1689 | 152 | 3 | 158 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_025100019 | chr3:128382624-128436751 |
Sample_02_0251 | Autonomic ganglia | SH-SY5Y-MYCN-OFF | 19 | 5 | 1667 | 152 | 3 | 148 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_031300237 | chr3:128382974-128435704 |
Sample_02_0313 | Neuroblastoma | SK-N-DZ | 237 | 9 | 1624 | 148 | 3 | 142 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_031200076 | chr3:128386639-128437680 |
Sample_02_0312 | Neuroblastoma | SK-N-BE_2-C | 76 | 1 | 1614 | 151 | 3 | 141 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_030400026 | chr3:128391688-128423338 |
Sample_02_0304 | Neuroblastoma | N206 | 26 | 1 | 998 | 89 | 2 | 100 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_034000058 | chr3:128392380-128436559 |
Sample_02_0340 | Brain | BE2C_2 | 58 | 7 | 1375 | 121 | 3 | 141 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_031900014 | chr3:128392646-128429740 |
Sample_02_0319 | Neuroblastoma | NB-EBc1 | 14 | 1 | 1139 | 91 | 2 | 119 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_007600300 | chr3:128394040-128417458 |
Sample_02_0076 | Autonomic ganglia | SH-SY5Y_DMSO_3h | 300 | 5 | 721 | 66 | 2 | 92 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_033800247 | chr3:128394149-128413911 |
Sample_02_0338 | Neuroblastoma | BE2 | 247 | 3 | 605 | 52 | 2 | 89 | 232 | EEFSEC,MIR1280 |
| SE_02_022000078 | chr3:128394185-128420758 |
Sample_02_0220 | Brain | BE2C_1 | 78 | 8 | 815 | 74 | 2 | 99 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_007500007 | chr3:128394471-128436702 |
Sample_02_0075 | Autonomic ganglia | kelly_DMSO_3h | 7 | 7 | 1316 | 117 | 3 | 134 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_029800047 | chr3:128396908-128436399 |
Sample_02_0298 | Neuroblastoma | CLB-GA | 47 | 5 | 1238 | 113 | 3 | 132 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_004400500 | chr3:128398211-128413800 |
Sample_02_0044 | Embryo endodermal | CyT49_ES_D5 | 500 | 2 | 486 | 46 | 2 | 80 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_029900219 | chr3:128398457-128433761 |
Sample_02_0299 | Neuroblastoma | CLB-MA | 219 | 5 | 1102 | 96 | 3 | 126 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_035600116 | chr3:128399633-128434074 |
Sample_02_0356 | Colon | Sw480 | 116 | 6 | 1075 | 95 | 3 | 96 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_01_003900183 | chr3:128402390-128427225 |
Sample_01_0039 | Haematopoietic and lymphoid tissue bone marrow | K562 | 183 | 5 | 781 | 67 | 2 | 52 | 232 | EEFSEC,MIR1280,DNAJB8,GATA2,LOC90246 |
| SE_02_035300757 | chr3:128402882-128436592 |
Sample_02_0353 | Colon | HT29 | 757 | 6 | 1071 | 99 | 3 | 91 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_01_003600361 | chr3:128403279-128426876 |
Sample_01_0036 | Cervix | HeLa-S3 | 361 | 5 | 748 | 65 | 2 | 51 | 232 | EEFSEC,MIR1280,DNAJB8,GATA2,LOC90246 |
| SE_02_017700178 | chr3:128407044-128433994 |
Sample_02_0177 | Urinary bladder | J82 | 178 | 2 | 857 | 74 | 2 | 76 | 232 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_033600523 | chr3:128408520-128428183 |
Sample_02_0336 | Haematopoietic and lymphoid tissue | SET2 | 523 | 2 | 610 | 53 | 1 | 53 | 71 | EEFSEC,MIR1280,DNAJB8 |
| SE_02_035800377 | chr3:128409190-128433880 |
Sample_02_0358 | Colon | LS180 | 377 | 4 | 780 | 71 | 1 | 69 | 0 | MIR1280,DNAJB8 |
Genomic distribution of SEs associated with MIR1280