SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_031100175
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Neuroblastoma
Biosample name: SK-N-AS
Genomic region: chr3:128381813-128436078
Size: 54265
Super-enhancer rank 175
Number of SE elements: 6
ChIP density(Case|Control): 49815.27|6186.21
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR1280 ;
ROSE Overlap EEFSEC ;
ROSE Proximal MIR1280 ; DNAJB8 ;
ROSE Closest MIR1280 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC90246 ; GATA2 ; DNAJB8-AS1 ; DNAJB8 ; GATA2-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_031100175 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers