Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000246731
Gene: MGC16275 Gene type: lncRNA
Strand: - External links:
Genomic region: chr17:74209980-74213342 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_068600606 chr17:74176972-74208780 Sample_02_0686 Lung NCI-H128_no infection 606 10 1142 49 8 87 465 RPL38,TTYH2,MGC16275
SE_02_144300186 chr17:74181172-74204557 Sample_02_1443 Lung H69M 186 8 825 37 8 71 217 RPL38,TTYH2,MGC16275
SE_02_123701077 chr17:74192870-74203553 Sample_02_1237 Skin MKL2_virus_positive 1077 2 395 23 7 25 16 TTYH2,MGC16275,RPL38
SE_02_140500254 chr17:74199520-74205912 Sample_02_1405 Embryonic kidney HEK293_siBAHD1_W667G_mutant 254 2 244 13 5 14 398 RPL38,TTYH2,MGC16275
SE_02_111400164 chr17:74203565-74208114 Sample_02_1114 Embryonic kidney HEK293 164 2 190 6 0 5 441 RPL38,TTYH2,MGC16275
SE_02_103900351 chr17:74220588-74245541 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 351 5 815 49 0 48 504 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100300021 chr17:74222386-74246649 Sample_02_1003 Brain Lateral temporal lobe_19T_Young 21 8 801 48 0 38 481 TTYH2,DNAI2,MGC16275,RPL38
SE_02_121300216 chr17:74230511-74251574 Sample_02_1213 Brain GBM31 216 1 730 53 0 43 879 TTYH2,DNAI2,MGC16275,RPL38
SE_02_120301214 chr17:74230977-74238838 Sample_02_1203 Brain NB1 1214 1 269 14 0 12 145 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100900155 chr17:74230991-74252461 Sample_02_1009 Brain Lateral temporal lobe_2T_AD 155 11 753 60 0 36 927 TTYH2,DNAI2,MGC16275,RPL38
SE_02_101300075 chr17:74231378-74277685 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 75 29 1540 137 5 86 1624 DNAI2,TTYH2,KIF19,RPL38,MGC16275
SE_02_120400116 chr17:74231714-74305580 Sample_02_1204 Brain NB2 116 15 2372 216 6 143 2704 DNAI2,TTYH2,KIF19,RPL38,MGC16275
SE_02_121100331 chr17:74231814-74250581 Sample_02_1211 Brain GBM21 331 9 643 41 0 33 792 TTYH2,DNAI2,MGC16275,RPL38
SE_02_096900593 chr17:74231866-74252082 Sample_02_0969 Brain H3.3K27M_PL637 593 12 705 53 0 33 800 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100500083 chr17:74232294-74250462 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 83 15 624 39 0 33 764 TTYH2,DNAI2,MGC16275,RPL38
SE_02_101400055 chr17:74232459-74250419 Sample_02_1014 Brain Lateral temporal lobe_7T_AD 55 5 612 39 0 33 749 TTYH2,DNAI2,MGC16275,RPL38
SE_02_101100056 chr17:74232461-74250590 Sample_02_1011 Brain Lateral temporal lobe_5T_AD 56 13 623 40 0 33 792 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100000100 chr17:74232556-74250919 Sample_02_1000 Brain Lateral temporal lobe_15T_Young 100 19 625 43 0 33 792 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100700143 chr17:74233436-74246383 Sample_02_1007 Brain Lateral temporal lobe_14T_Old 143 10 428 24 0 24 306 TTYH2,DNAI2,MGC16275,RPL38
SE_02_021601242 chr17:74233573-74255955 Sample_02_0216 Skin NHEK_scramble 1242 4 799 68 2 52 1135 TTYH2,MGC16275,DNAI2,RPL38
SE_02_100400236 chr17:74234013-74241070 Sample_02_1004 Brain Lateral temporal lobe_10T_Old 236 2 239 11 0 11 100 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100600186 chr17:74234093-74246335 Sample_02_1006 Brain Lateral temporal lobe_13T_Old 186 6 402 23 0 24 306 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100100049 chr17:74234161-74246248 Sample_02_1001 Brain Lateral temporal lobe_17T_Young 49 3 398 22 0 24 306 TTYH2,DNAI2,MGC16275,RPL38
SE_02_117300304 chr17:74234806-74247154 Sample_02_1173 Brain GBM01 304 1 404 24 0 24 306 TTYH2,DNAI2,MGC16275,RPL38
SE_02_100200022 chr17:74235234-74245412 Sample_02_1002 Brain Lateral temporal lobe_18T_Young 22 5 337 21 0 21 306 TTYH2,DNAI2,MGC16275,RPL38
SE_02_101200065 chr17:74236078-74244460 Sample_02_1012 Brain Lateral temporal lobe_8T_AD 65 5 281 16 0 15 306 TTYH2,DNAI2,MGC16275,RPL38
SE_02_120300798 chr17:74238889-74246925 Sample_02_1203 Brain NB1 798 1 249 19 0 15 206 TTYH2,DNAI2,MGC16275,RPL38
SE_02_118100331 chr17:74238952-74247104 Sample_02_1181 Brain GBM10 331 1 250 19 0 15 206 TTYH2,DNAI2,MGC16275,RPL38
SE_02_119601164 chr17:74240499-74247026 Sample_02_1196 Brain GBM32 1164 1 212 16 0 14 206 TTYH2,DNAI2,MGC16275,RPL38
SE_02_061100072 chr17:74240532-74296579 Sample_02_0611 Liposarcoma DDLPS_T1 72 10 1792 180 6 104 2060 DNAI2,TTYH2,KIF19,RPL38,MGC16275
SE_02_104800264 chr17:74245379-74301605 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 264 23 1788 176 6 106 2055 DNAI2,TTYH2,KIF19,RPL38,MGC16275

Genomic distribution of SEs associated with MGC16275

The strength of the tissue affected by the gene


Expression of MGC16275