SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: LOC646851 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_013200691 chr22:38681035-38708109 Sample_02_0132 Lung 1015_CL 691 4 689 60 1 151 1319 GTPBP1,JOSD1,TOMM22,CBY1,LOC646851,SUN2
SE_00_003500443 chr22:38681517-38707183 Sample_00_0035 Sigmoid colon sigmoid-colon 443 8 655 57 1 149 1319 GTPBP1,JOSD1,TOMM22,CBY1,LOC646851,SUN2
SE_01_007900238 chr22:38689060-38718804 Sample_01_0079 Peyers patch Peyers-patch 238 5 718 58 3 145 703 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_003700131 chr22:38689691-38708403 Sample_01_0037 Liver hepatocyte 131 3 455 43 2 87 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_023600181 chr22:38690000-38708024 Sample_02_0236 Colon V206 181 3 438 40 1 86 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_002000300 chr22:38691048-38702086 Sample_00_0020 Large intestine large-intestine_108d 300 1 268 15 0 35 172 JOSD1,GTPBP1,CBY1,LOC646851,TOMM22
SE_02_032200819 chr22:38692578-38702335 Sample_02_0322 Colon Caco-2 819 1 243 14 0 35 172 JOSD1,GTPBP1,CBY1,LOC646851,TOMM22
SE_00_003600423 chr22:38692692-38702082 Sample_00_0036 Small intestine small-intestine_108days 423 1 232 12 0 35 172 JOSD1,GTPBP1,CBY1,LOC646851,TOMM22
SE_01_008900799 chr22:38692735-38707966 Sample_01_0089 Transverse colon transverse-colon 799 3 370 35 1 84 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_029400483 chr22:38692795-38719732 Sample_02_0294 Pancreatic L3-6_DMSO 483 3 652 54 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_024200508 chr22:38692898-38719753 Sample_02_0242 Colon V481 508 3 650 54 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_035300838 chr22:38693245-38719359 Sample_02_0353 Colon HT29 838 4 631 53 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_002100921 chr22:38693284-38702294 Sample_02_0021 Colon V429 921 1 221 11 0 35 172 JOSD1,GTPBP1,CBY1,LOC646851,TOMM22
SE_02_009900585 chr22:38693778-38719332 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 585 4 617 53 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_002700867 chr22:38693948-38718695 Sample_01_0027 Prostate epithelial-cell-of-prostate 867 3 596 52 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_043100272 chr22:38693949-38717117 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 272 4 568 50 3 131 614 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_009000612 chr22:38693951-38719706 Sample_01_0090 Lung upper-lobe-of-left-lung 612 4 622 54 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_009700578 chr22:38693980-38710923 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 578 3 393 39 3 98 413 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_020700385 chr22:38694444-38706029 Sample_02_0207 Stomach FU97 385 5 284 29 1 56 239 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_008500577 chr22:38694571-38736861 Sample_01_0085 Stomach stomach 577 4 1112 95 6 222 2378 SUN2,GTPBP1,JOSD1,CBY1,TOMM22,LOC646851
SE_01_004100761 chr22:38694854-38719136 Sample_01_0041 Skin keratinocyte 761 4 583 52 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_004200465 chr22:38695229-38707230 Sample_00_0042 Stomach stomach_30y 465 5 286 31 1 83 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_008300542 chr22:38695325-38736569 Sample_01_0083 Sigmoid colon sigmoid-colon 542 4 1074 90 6 222 2374 SUN2,GTPBP1,JOSD1,CBY1,TOMM22,LOC646851
SE_01_008200779 chr22:38695509-38718632 Sample_01_0082 Right lobe of liver right-lobe-of-liver 779 3 550 49 3 135 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_007700532 chr22:38695546-38736401 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 532 4 1066 89 6 222 2342 SUN2,GTPBP1,JOSD1,CBY1,TOMM22,LOC646851
SE_01_008401561 chr22:38695856-38702181 Sample_01_0084 Spleen spleen 1561 1 151 8 0 35 172 JOSD1,GTPBP1,CBY1,LOC646851,TOMM22
SE_00_004100595 chr22:38695883-38707755 Sample_00_0041 Stomach stomach_3y 595 4 280 31 1 83 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_008000320 chr22:38695920-38708248 Sample_01_0080 Prostate prostate 320 2 296 33 2 85 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_003900646 chr22:38695974-38707825 Sample_00_0039 Spleen spleen_3y 646 3 281 31 1 84 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_01_007200589 chr22:38695977-38736432 Sample_01_0072 Breast epithelium breast-epithelium 589 5 1058 89 6 222 2344 SUN2,GTPBP1,JOSD1,CBY1,TOMM22,LOC646851
SE_01_006900737 chr22:38696036-38707809 Sample_01_0069 Adrenal gland adrenal-gland 737 2 277 31 1 84 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_001100751 chr22:38696097-38707876 Sample_00_0011 Esophagus esophagus 751 3 278 31 1 84 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_004000508 chr22:38696203-38707175 Sample_00_0040 Spleen spleen_30y 508 4 259 30 1 82 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_002200969 chr22:38696222-38707069 Sample_00_0022 Lung lung_30y 969 4 254 30 1 80 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_001400591 chr22:38696243-38707889 Sample_00_0014 Heart left ventricle heart-left-ventricle 591 2 275 31 1 84 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_000800534 chr22:38696318-38708182 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 534 2 282 33 2 85 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_028400233 chr22:38696457-38717948 Sample_02_0284 Pelvis patient 119 233 4 513 49 3 134 625 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_03_000300203 chr22:38696522-38711791 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 203 3 351 37 3 100 413 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_002200676 chr22:38699215-38707339 Sample_02_0022 Blood CD8donorA 676 3 200 26 1 81 336 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_02_003801112 chr22:38699649-38714088 Sample_02_0038 Embryo DE 1112 4 350 39 3 100 407 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
SE_00_000100118 chr22:38700374-38706630 Sample_00_0001 Adipose adipose-tissue 118 3 150 21 1 59 226 GTPBP1,JOSD1,CBY1,TOMM22,LOC646851,SUN2
Genomic distribution of SEs associated with LOC646851
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC646851

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)