SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000121897
Gene: LIAS Gene type: protein_coding
Strand: + External links:
Genomic region: chr4:39459004-39485109 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_032500368 chr4:39405962-39417098 Sample_02_0325 Liver hepatocytes_d1 368 1 250 20 1 33 125 KLB,LIAS,RPL9,RFC1
SE_02_032600221 chr4:39406094-39452243 Sample_02_0326 Liver hepatocytes_d3 221 9 1189 172 7 100 889 KLB,LOC401127,LIAS,RPL9,RFC1
SE_02_032700145 chr4:39406100-39452068 Sample_02_0327 Liver hepatocytes_d6 145 5 1181 169 6 100 889 KLB,LOC401127,LIAS,RPL9,RFC1
SE_02_006200017 chr4:39406397-39417373 Sample_02_0062 Adipose hMADS-3_brite 17 3 246 22 1 33 125 KLB,LIAS,RPL9,RFC1
SE_02_004900164 chr4:39406540-39432485 Sample_02_0049 Embryo endodermal CyT49_GTtoH 164 3 652 91 2 51 125 KLB,LOC401127,LIAS,RPL9,RFC1
SE_02_046500730 chr4:39406582-39415634 Sample_02_0465 Adipose subcutaneous adipocytes 730 1 211 19 1 31 125 KLB,MIR5591,RPL9,RFC1,LIAS
SE_02_004800643 chr4:39406691-39432142 Sample_02_0048 Embryo endodermal CyT49_HE 643 5 639 87 2 51 123 KLB,LOC401127,LIAS,RPL9,RFC1
SE_02_006100026 chr4:39407097-39417299 Sample_02_0061 Adipose hMADS-3_white 26 6 232 20 1 28 85 KLB,LIAS,RPL9,RFC1
SE_02_028500355 chr4:39409019-39431966 Sample_02_0285 Liver HuH7_untreat 355 3 586 84 2 27 0 KLB,LOC401127,LIAS,RPL9,RFC1
SE_02_103602879 chr4:39492352-39523166 Sample_02_1036 Mammary gland HCC70_XY018 2879 11 776 125 2 68 525 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_032501007 chr4:39494713-39544376 Sample_02_0325 Liver hepatocytes_d1 1007 11 1282 203 3 86 943 UGDH,LIAS,RPL9,LOC401127
SE_01_000600223 chr4:39495179-39559422 Sample_01_0006 Lung A549_ethanol_1h 223 10 1555 232 4 130 1129 UGDH,C4ORF34,LIAS,RPL9,LOC401127
SE_02_127900827 chr4:39495488-39549120 Sample_02_1279 Bone Mesenchymal stem cells 827 13 1359 216 4 97 943 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_152300173 chr4:39495738-39543287 Sample_02_1523 Lung A549 DMSO 173 13 1228 194 2 86 943 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_141600138 chr4:39495763-39588411 Sample_02_1416 Brain SF9402 138 15 2275 315 4 134 1254 UGDH,UGDH-AS1,SMIM14,RPL9,LOC401127,LIAS
SE_02_123000026 chr4:39495824-39549845 Sample_02_1230 Lung PC9 26 17 1363 215 4 97 943 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_123100090 chr4:39495927-39525044 Sample_02_1231 Lung PC9_siMED13L-1 90 11 737 121 1 68 525 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_001100206 chr4:39496277-39549601 Sample_02_0011 Kidney A-498_wtVHL 206 20 1350 214 4 97 943 UGDH,LIAS,RPL9,LOC401127
SE_03_000800445 chr4:39497551-39545084 Sample_03_0008 Lung A549_dexamethasone_7h 445 6 1230 197 3 86 943 UGDH,LIAS,RPL9,LOC401127
SE_03_001500414 chr4:39497912-39558955 Sample_03_0015 Lung A549_dexamethasone_8h 414 7 1483 226 4 130 1129 UGDH,C4ORF34,LIAS,RPL9,LOC401127
SE_02_142800698 chr4:39498156-39566802 Sample_02_1428 Shoulder fibroblast_316 698 19 1683 245 4 131 1129 UGDH,UGDH-AS1,SMIM14,RPL9,LOC401127,LIAS
SE_02_157100933 chr4:39498277-39523990 Sample_02_1571 Fibroblast Fibroblast cells 933 11 669 111 1 68 525 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_055400466 chr4:39498278-39529097 Sample_02_0554 Other Aska shSSX 466 8 785 132 1 86 865 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_026800112 chr4:39498607-39549351 Sample_02_0268 Kidney A-498 112 14 1295 206 4 97 936 UGDH,LIAS,RPL9,LOC401127
SE_02_045200770 chr4:39500213-39527419 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 770 13 693 111 1 67 481 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_137800853 chr4:39500431-39524465 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 853 15 624 98 1 55 386 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_095100531 chr4:39500434-39523588 Sample_02_0951 HMSCs hMSCs 531 10 608 96 1 55 386 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_04_001000403 chr4:39500601-39544343 Sample_04_0010 Lung A549 TGFb 403 9 1152 178 3 73 804 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_136400180 chr4:39500623-39528526 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 180 8 722 115 1 73 726 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_011001100 chr4:39500817-39529950 Sample_02_0110 Ovaries IOE11 1100 5 745 120 1 73 726 UGDH,LIAS,RPL9,LOC401127
SE_02_155200843 chr4:39500874-39541376 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 843 15 1060 163 2 73 804 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_080800696 chr4:39500900-39544170 Sample_02_0808 Ovary RMG1_ARID1A KO 696 30 1145 178 3 73 804 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_010700916 chr4:39500943-39529753 Sample_02_0107 Endometrium EEC16 916 4 738 119 1 73 726 UGDH,LIAS,RPL9,LOC401127
SE_02_063800899 chr4:39500944-39523371 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 899 12 590 94 1 55 386 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_142600425 chr4:39501028-39566967 Sample_02_1426 Shoulder fibroblast_341 425 13 1620 231 4 118 990 UGDH,UGDH-AS1,SMIM14,RPL9,LOC401127,LIAS
SE_02_026200808 chr4:39501052-39529224 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 808 4 725 118 1 73 726 UGDH,LIAS,RPL9,LOC401127
SE_04_000900379 chr4:39501077-39544631 Sample_04_0009 Lung A549 379 11 1145 178 3 73 804 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_001000246 chr4:39501574-39549831 Sample_02_0010 Kidney A-498_emptyvector 246 9 1223 189 4 84 804 UGDH,LIAS,RPL9,LOC401127
SE_02_123200124 chr4:39501677-39525120 Sample_02_1232 Lung PC9_siMED13L-2 124 11 595 94 1 55 386 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_071900905 chr4:39501741-39523022 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 905 6 551 88 1 55 386 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_02_042000463 chr4:39502075-39524530 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 463 7 577 90 1 55 386 UGDH,LIAS,RPL9,LOC401127
SE_04_000700288 chr4:39502497-39540209 Sample_04_0007 Lung A549 FOXA2 shRNA2 288 10 984 152 2 69 804 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_04_000600340 chr4:39502537-39542283 Sample_04_0006 Lung A549 GFP control 340 14 1039 161 2 69 804 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_03_001000429 chr4:39504305-39545610 Sample_03_0010 Lung A549_dexamethasone_1h 429 6 1055 165 2 61 730 UGDH,LIAS,RPL9,LOC401127
SE_03_000400449 chr4:39504311-39545523 Sample_03_0004 Lung A549_dexamethasone_4h 449 5 1052 165 2 61 730 UGDH,LIAS,RPL9,LOC401127
SE_03_000900515 chr4:39504313-39545367 Sample_03_0009 Lung A549_dexamethasone_3h 515 4 1047 165 2 61 730 UGDH,LIAS,RPL9,LOC401127
SE_03_000500421 chr4:39504377-39545612 Sample_03_0005 Lung A549_dexamethasone_0.5h 421 5 1050 165 2 61 726 UGDH,LIAS,RPL9,LOC401127
SE_02_047800582 chr4:39504553-39544679 Sample_02_0478 Colon normal colon mucosa 582 18 1029 162 2 56 709 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
SE_04_000800331 chr4:39505793-39543310 Sample_04_0008 Lung A549 shRNA control 331 14 967 153 1 47 635 UGDH,UGDH-AS1,RPL9,LOC401127,LIAS
Genomic distribution of SEs associated with LIAS
Genome Browser

The strength of the tissue affected by the gene

Expression of LIAS

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)