Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000272767
Gene: JMJD1C-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr10:63465229-63466563 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_133100170 chr10:63404391-63435794 Sample_02_1331 Blood Molm13_CTRL 170 7 838 73 5 19 0 JMJD1C,JMJD1C-AS1,MIR1296
SE_02_101701687 chr10:63406561-63442301 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1687 13 935 77 5 21 0 JMJD1C,JMJD1C-AS1,MIR1296
SE_02_109800398 chr10:63407090-63434818 Sample_02_1098 Blood THP1_DMSO_noPMA 398 20 739 64 5 19 0 JMJD1C,JMJD1C-AS1,MIR1296
SE_02_054800321 chr10:63409110-63435437 Sample_02_0548 Blood THP-1_24h with EtOH 321 3 698 62 5 19 0 JMJD1C,JMJD1C-AS1,MIR1296
SE_02_137801351 chr10:63409649-63437934 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1351 16 751 65 5 19 0 JMJD1C,JMJD1C-AS1,MIR1296
SE_02_094800762 chr10:63428956-63440303 Sample_02_0948 Pharyng Detroit562 762 4 288 23 2 0 0 JMJD1C,JMJD1C-AS1
SE_02_157001209 chr10:63478045-63517225 Sample_02_1570 iPSCs EiPSC 1209 7 968 86 10 17 0 JMJD1C-AS1,JMJD1C,REEP3
SE_02_066100385 chr10:63481521-63523422 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 385 10 1032 93 10 42 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_092901029 chr10:63488724-63516387 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1029 12 708 64 6 9 0 JMJD1C-AS1,JMJD1C,REEP3
SE_02_103501073 chr10:63489083-63532898 Sample_02_1035 Mammary gland HCC70_Vehicle 1073 11 1061 100 10 46 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_053000524 chr10:63491330-63525617 Sample_02_0530 Mammary gland MCF10A 524 9 858 78 7 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_124900308 chr10:63491352-63502629 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 308 1 284 25 1 0 0 JMJD1C-AS1,JMJD1C,REEP3
SE_02_053301236 chr10:63491357-63525137 Sample_02_0533 Blood vessel Circle of Willis_54y 1236 8 850 78 7 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_074800778 chr10:63491374-63524048 Sample_02_0748 Mammary gland HCC1599_WO 778 10 813 76 6 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_066000446 chr10:63491415-63525384 Sample_02_0660 Mammary gland MCF10DCIS 446 6 851 78 7 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_074601082 chr10:63491646-63523762 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 1082 5 796 74 6 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_101600787 chr10:63491677-63524103 Sample_02_1016 Embryo H9_Mesendoderm_24h 787 5 810 76 6 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_143500482 chr10:63491698-63523879 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 482 5 800 74 6 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_134700216 chr10:63491709-63524147 Sample_02_1347 Leukophereses leukophereses_p401 216 20 811 76 6 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_074500677 chr10:63491717-63523828 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 677 4 799 74 6 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_143400464 chr10:63491840-63525777 Sample_02_1434 Trophoblast trophoblast stem cells 464 7 849 80 8 43 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_103600901 chr10:63491983-63538746 Sample_02_1036 Mammary gland HCC70_XY018 901 15 1111 108 10 57 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_125000486 chr10:63492205-63500867 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 486 1 224 21 0 0 0 JMJD1C-AS1,JMJD1C,REEP3
SE_02_125200382 chr10:63492279-63502544 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 382 1 257 25 1 0 0 JMJD1C-AS1,JMJD1C,REEP3
SE_02_077600119 chr10:63503238-63606461 Sample_02_0776 Pancreas EndoC-BH1 119 22 2390 266 33 206 339 REEP3,JMJD1C-AS1,JMJD1C
SE_02_124900293 chr10:63503318-63515502 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 293 1 328 28 4 7 0 JMJD1C-AS1,JMJD1C,REEP3
SE_02_071301292 chr10:63503668-63523478 Sample_02_0713 Pancreas BxPC3_sgTP63 1292 5 483 45 5 40 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_086300176 chr10:63504429-63633862 Sample_02_0863 Malignant rhaboid tumor TTC1240_empty 176 33 2941 325 33 303 727 REEP3,JMJD1C-AS1,JMJD1C
SE_02_049300913 chr10:63504685-63523774 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 913 4 461 42 3 34 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_125800304 chr10:63504751-63557240 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 304 9 1190 126 15 67 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_106900104 chr10:63513153-63544590 Sample_02_1069 Bone marrow Bone marrow aspirate 104 15 684 70 8 53 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_048102064 chr10:63513429-63524894 Sample_02_0481 Mammary gland MDA-MB231 2064 5 284 30 3 34 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_057500297 chr10:63514298-63527660 Sample_02_0575 Blood MOLM13_sgLKB1e2 297 1 306 31 5 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_058100211 chr10:63514315-63528922 Sample_02_0581 Blood MOLM13_empty_HG 211 1 329 32 5 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_057400223 chr10:63514568-63529211 Sample_02_0574 Blood MOLM-13_sgNeg2 223 1 327 31 5 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_105200570 chr10:63514656-63523867 Sample_02_1052 Esophagus JH-EsoAd1 570 5 205 22 2 34 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_134100191 chr10:63514666-63530800 Sample_02_1341 Blood MV411 191 1 357 39 5 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_057700216 chr10:63514745-63528715 Sample_02_0577 Blood MOLM13_empty 216 1 310 31 5 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_058200184 chr10:63514784-63529188 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 184 1 318 31 5 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_071600545 chr10:63514833-63534940 Sample_02_0716 Pancreas SUIT2_GFP 545 3 442 51 6 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_071900067 chr10:63514925-63555870 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 67 10 892 99 13 67 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_046100206 chr10:63514967-63528983 Sample_02_0461 Blood MV-4-11-B cells 206 4 309 29 5 37 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_143201564 chr10:63515009-63523815 Sample_02_1432 Bone A673 STAG2 WT 1564 2 191 20 2 34 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_046400183 chr10:63515035-63524077 Sample_02_0464 Bone marrow MOLM-13 183 5 201 22 2 34 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_136500978 chr10:63515047-63523598 Sample_02_1365 Pancreas AsPC1-untreated 978 3 185 20 2 33 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_071500546 chr10:63515063-63538323 Sample_02_0715 Pancreas SUIT2_TP63dN 546 6 497 54 6 48 187 REEP3,JMJD1C-AS1,JMJD1C
SE_02_127500513 chr10:63515155-63525737 Sample_02_1275 Prostate PC3_Vorinostat 513 9 239 25 4 34 187 REEP3,JMJD1C-AS1,JMJD1C

Genomic distribution of SEs associated with JMJD1C-AS1

The strength of the tissue affected by the gene


Expression of JMJD1C-AS1