SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000100605
Gene: ITPK1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr14:92936914-93116320 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_039600021 chr14:92925328-93117562 Sample_02_0396 Skin NHEK-D 21 67 5815 414 10 371 3563 ITPK1,CHGA,ITPK1-AS1
SE_01_008100134 chr14:92949190-93098299 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 134 23 4428 293 8 254 1444 ITPK1,ITPK1-AS1,CHGA
SE_01_007800071 chr14:92949521-93117224 Sample_01_0078 Heart left ventricle heart-left-ventricle 71 25 4937 353 8 325 1787 ITPK1,ITPK1-AS1,CHGA
SE_01_007700042 chr14:92949685-93117113 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 42 28 4927 351 8 325 1787 ITPK1,ITPK1-AS1,CHGA
SE_01_007400050 chr14:92949776-93117236 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 50 24 4925 353 8 325 1787 ITPK1,ITPK1-AS1,CHGA
SE_01_008300051 chr14:92949898-93117226 Sample_01_0083 Sigmoid colon sigmoid-colon 51 24 4917 352 8 325 1787 ITPK1,ITPK1-AS1,CHGA
SE_01_008800022 chr14:92951332-93117385 Sample_01_0088 Tibial nerve tibial-nerve 22 26 4881 351 8 325 1787 ITPK1,ITPK1-AS1,CHGA
SE_01_009200041 chr14:92951807-93117190 Sample_01_0092 Vagina vagina 41 27 4862 347 8 325 1773 ITPK1,ITPK1-AS1,CHGA
SE_01_008400186 chr14:92969143-93117443 Sample_01_0084 Spleen spleen 186 30 4283 315 8 282 1408 ITPK1,ITPK1-AS1,CHGA
SE_00_002000020 chr14:92969458-93075215 Sample_00_0020 Large intestine large-intestine_108d 20 12 3012 192 4 186 986 ITPK1,ITPK1-AS1,CHGA
SE_02_003300501 chr14:92984197-93067961 Sample_02_0033 Pancreas pancreatic-islets-F 501 14 2406 156 4 157 267 ITPK1,ITPK1-AS1
SE_00_003600023 chr14:92984305-93075188 Sample_00_0036 Small intestine small-intestine_108days 23 11 2583 165 4 175 986 ITPK1,ITPK1-AS1
SE_02_021600036 chr14:93001736-93085092 Sample_02_0216 Skin NHEK_scramble 36 26 2335 157 5 161 973 ITPK1,ITPK1-AS1
SE_01_007300450 chr14:93003724-93097699 Sample_01_0073 Coronary artery coronary-artery 450 19 2716 192 6 181 973 ITPK1,ITPK1-AS1
SE_02_029400036 chr14:93003889-93117516 Sample_02_0294 Pancreatic L3-6_DMSO 36 15 3263 256 6 252 1316 ITPK1,ITPK1-AS1
SE_02_035000048 chr14:93005842-93073438 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 48 13 1883 124 2 147 894 ITPK1,ITPK1-AS1
SE_02_001700065 chr14:93005860-93070311 Sample_02_0017 Embryo H9_ESC 65 12 1811 118 2 138 604 ITPK1,ITPK1-AS1
SE_02_005600031 chr14:93005863-93115334 Sample_02_0056 Mammary gland HMEC 31 23 3151 240 6 245 1092 ITPK1,ITPK1-AS1
SE_02_023700052 chr14:93005877-93086954 Sample_02_0237 Colon V389 52 20 2249 149 4 164 973 ITPK1,ITPK1-AS1
SE_01_007900044 chr14:93006610-93082949 Sample_01_0079 Peyers patch Peyers-patch 44 10 2114 135 3 158 973 ITPK1,ITPK1-AS1
SE_01_008700213 chr14:93015467-93093609 Sample_01_0087 Thyroid gland thyroid-gland 213 10 2183 145 4 169 973 ITPK1,ITPK1-AS1
SE_02_025700327 chr14:93015593-93087242 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 327 7 1959 129 4 157 973 ITPK1,ITPK1-AS1
SE_00_002200665 chr14:93032397-93075154 Sample_00_0022 Lung lung_30y 665 8 1118 63 2 93 798 ITPK1,ITPK1-AS1
SE_02_023200500 chr14:93033222-93087714 Sample_02_0232 Tonsil ILC3 500 8 1433 86 4 108 877 ITPK1,ITPK1-AS1
SE_01_007500215 chr14:93033258-93117133 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 215 16 2348 183 6 186 1220 ITPK1,ITPK1-AS1
SE_01_008900677 chr14:93034301-93075379 Sample_01_0089 Transverse colon transverse-colon 677 8 1070 62 2 88 798 ITPK1,ITPK1-AS1
SE_02_038100761 chr14:93034568-93067290 Sample_02_0381 Heart purified cardiomyocyte WT 761 4 872 52 2 68 1 ITPK1,ITPK1-AS1
SE_01_009100671 chr14:93035323-93092405 Sample_01_0091 Uterus uterus 671 10 1535 95 3 113 877 ITPK1,ITPK1-AS1
SE_00_001101112 chr14:93036456-93092189 Sample_00_0011 Esophagus esophagus 1112 11 1494 95 3 113 877 ITPK1,ITPK1-AS1
SE_02_023100611 chr14:93044230-93090510 Sample_02_0231 Tonsil ILC1 611 8 1240 88 3 91 877 ITPK1,ITPK1-AS1
SE_02_041800199 chr14:93052250-93070902 Sample_02_0418 Embryo H9_Null+EZH2 199 5 460 34 1 46 627 ITPK1,ITPK1-AS1
SE_02_018500183 chr14:93059801-93095096 Sample_02_0185 Skin UACC257 183 7 984 66 3 50 877 ITPK1,ITPK1-AS1
SE_02_010100544 chr14:93059897-93115331 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 544 13 1591 132 4 117 994 ITPK1,ITPK1-AS1
SE_02_018400231 chr14:93059923-93094864 Sample_02_0184 Skin SKMEL30 231 6 968 62 3 50 877 ITPK1,ITPK1-AS1
SE_01_002400406 chr14:93059924-93135059 Sample_01_0024 Blood CD14-positive-monocyte 406 17 2133 183 5 133 1220 ITPK1,ITPK1-AS1,MOAP1,C14ORF109
SE_02_010400625 chr14:93060425-93112366 Sample_02_0104 Blood neutrophils 625 10 1503 128 4 82 877 ITPK1,ITPK1-AS1
SE_01_005200375 chr14:93060875-93117214 Sample_01_0052 Blood neutrophil 375 7 1599 139 4 121 1220 ITPK1,ITPK1-AS1
SE_02_010000688 chr14:93063181-93115389 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 688 11 1511 126 4 116 1011 ITPK1,ITPK1-AS1
SE_02_035900404 chr14:93064362-93094917 Sample_02_0359 Colon Colo741 404 3 854 55 3 46 877 ITPK1,ITPK1-AS1
SE_02_027700293 chr14:93081371-93117384 Sample_02_0277 Retina FW18 293 4 1085 116 3 91 343 ITPK1,ITPK1-AS1
SE_02_027800183 chr14:93081400-93117180 Sample_02_0278 Retina FW24 183 5 1079 114 3 91 343 ITPK1,ITPK1-AS1
SE_02_022800260 chr14:93081471-93117514 Sample_02_0228 Oesophagus KYSE510 260 7 1092 116 3 91 343 ITPK1,ITPK1-AS1
SE_02_041700345 chr14:93081608-93087192 Sample_02_0417 Embryo H9_Null 345 3 147 16 1 7 0 ITPK1,ITPK1-AS1
SE_02_006300575 chr14:93083055-93116926 Sample_02_0063 Skin Keratinocytes 575 5 1037 109 3 91 343 ITPK1,ITPK1-AS1
SE_02_009600283 chr14:93083057-93138759 Sample_02_0096 Mammary gland ZR-75-1_1 283 9 1674 170 4 123 343 ITPK1,ITPK1-AS1,MOAP1,C14ORF109
SE_02_000500390 chr14:93084277-93117333 Sample_02_0005 Cervical cervical-cancer_KDM5C 390 4 1017 108 2 91 343 ITPK1,ITPK1-AS1
SE_02_001700370 chr14:93085146-93116963 Sample_02_0017 Embryo H9_ESC 370 6 972 101 2 90 343 ITPK1,ITPK1-AS1
SE_02_042100590 chr14:93085868-93117120 Sample_02_0421 Brain BE2C_3 590 4 960 100 2 85 343 ITPK1,ITPK1-AS1
SE_02_029600647 chr14:93085885-93117396 Sample_02_0296 Neuroblastoma CLB-BER-Lud 647 5 967 103 2 85 343 ITPK1,ITPK1-AS1
SE_02_021500213 chr14:93086644-93101559 Sample_02_0215 Skin NHEK_siGRHL3 213 3 522 51 2 18 0 ITPK1,ITPK1-AS1
SE_00_003100601 chr14:93098371-93134903 Sample_00_0031 Placenta placenta 601 10 1022 103 1 83 343 ITPK1,ITPK1-AS1,C14orf142,UBR7
SE_00_002000724 chr14:93098621-93117173 Sample_00_0020 Large intestine large-intestine_108d 724 4 504 59 0 71 343 ITPK1,ITPK1-AS1
SE_00_003600799 chr14:93098822-93117071 Sample_00_0036 Small intestine small-intestine_108days 799 5 498 58 0 71 343 ITPK1,ITPK1-AS1
SE_01_007900925 chr14:93103136-93117140 Sample_01_0079 Peyers patch Peyers-patch 925 3 362 40 0 67 343 ITPK1,ITPK1-AS1
SE_00_001400303 chr14:93104671-93152316 Sample_00_0014 Heart left ventricle heart-left-ventricle 303 6 1443 201 4 114 343 ITPK1,ITPK1-AS1,MOAP1,C14ORF109
SE_02_032701063 chr14:93104827-93152119 Sample_02_0327 Liver hepatocytes_d6 1063 9 1431 199 4 114 343 ITPK1,ITPK1-AS1,MOAP1,C14ORF109
SE_02_024600129 chr14:93106046-93138868 Sample_02_0246 Mammary gland MCF-7_estradiol 129 5 921 92 1 93 343 ITPK1,ITPK1-AS1,MOAP1,C14ORF109
Genomic distribution of SEs associated with ITPK1
Genome Browser

The strength of the tissue affected by the gene

Expression of ITPK1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)