SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000135423
Gene: GLS2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:56470944-56488414 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_001800430 chr12:56448661-56469416 Sample_02_0018 Embryo NEC 430 3 555 51 10 119 895 MIP,SPRYD4,TIMELESS,GLS2
SE_01_010101290 chr12:56464200-56480929 Sample_01_0101 Pancreas pancreas_54y 1290 6 413 31 9 165 1354 SPRYD4,GLS2,RBMS2,TIMELESS,MIP
SE_02_103601651 chr12:56508540-56553855 Sample_02_1036 Mammary gland HCC70_XY018 1651 22 1110 136 32 37 105 RBMS2,SPRYD4,GLS2
SE_01_009000468 chr12:56513769-56542326 Sample_01_0090 Lung upper-lobe-of-left-lung 468 4 692 100 24 34 105 RBMS2,SPRYD4,GLS2
SE_02_098901647 chr12:56513953-56530126 Sample_02_0989 Kidney kidney cortex_WT 1647 4 357 21 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_071700033 chr12:56513996-56565709 Sample_02_0717 Pancreas HPAFII_GFP_DOX 33 12 1251 160 33 40 164 RBMS2,SPRYD4,GLS2
SE_02_080800188 chr12:56514005-56594172 Sample_02_0808 Ovary RMG1_ARID1A KO 188 52 1900 199 41 97 1544 RBMS2,BAZ2A,SPRYD4,SNORD59B,GLS2
SE_02_127800394 chr12:56514020-56537854 Sample_02_1278 Chordoma UCH1_DMSO_48h 394 7 555 72 13 34 105 RBMS2,SPRYD4,GLS2
SE_02_049100168 chr12:56514028-56537837 Sample_02_0491 Pharyng Detroit 562-Control 168 6 555 72 13 34 105 RBMS2,SPRYD4,GLS2
SE_02_076600404 chr12:56514036-56537573 Sample_02_0766 Ovary PEO1 404 11 547 70 11 34 105 RBMS2,SPRYD4,GLS2
SE_02_077000575 chr12:56514053-56537900 Sample_02_0770 Ovary OVCA429_shLuc 575 14 555 72 13 34 105 RBMS2,SPRYD4,GLS2
SE_02_049200196 chr12:56514057-56537282 Sample_02_0492 Pharyng Detroit 562_LPS 196 6 540 67 9 34 105 RBMS2,SPRYD4,GLS2
SE_02_116900647 chr12:56514067-56537829 Sample_02_1169 Biliary H69_TGF beta_16h_2 647 6 554 72 13 34 105 RBMS2,SPRYD4,GLS2
SE_02_116200690 chr12:56514067-56540674 Sample_02_1162 Stomach YCC11 690 18 641 92 20 34 105 RBMS2,SPRYD4,GLS2
SE_02_116800706 chr12:56514079-56537235 Sample_02_1168 Biliary H69_TGF Vehicle_2 706 9 540 67 9 34 105 RBMS2,SPRYD4,GLS2
SE_02_094600338 chr12:56514089-56528422 Sample_02_0946 Tongue HN12 338 3 304 20 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_048101070 chr12:56514202-56530129 Sample_02_0481 Mammary gland MDA-MB231 1070 3 352 21 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_131900210 chr12:56514437-56546790 Sample_02_1319 Connective Tissue HT1080_DDIT3 210 16 779 111 27 34 105 RBMS2,SPRYD4,GLS2
SE_02_094900938 chr12:56514631-56531210 Sample_02_0949 Umbilical artery HUAEC_WT 938 9 379 28 5 34 105 RBMS2,SPRYD4,GLS2
SE_01_010400720 chr12:56514755-56544221 Sample_01_0104 Lung upper lobe of left lung 720 11 728 104 24 34 105 RBMS2,SPRYD4,GLS2
SE_02_151000407 chr12:56514931-56546820 Sample_02_1510 Lung H3122_LR_Pano 407 13 774 111 27 34 105 RBMS2,SPRYD4,GLS2
SE_02_076700416 chr12:56515456-56536645 Sample_02_0767 Ovary OVCA429 416 14 504 65 8 34 105 RBMS2,SPRYD4,GLS2
SE_02_099000575 chr12:56515643-56528452 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 575 4 277 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_072100081 chr12:56515863-56534397 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 81 7 429 44 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_071300144 chr12:56515895-56536569 Sample_02_0713 Pancreas BxPC3_sgTP63 144 6 490 64 8 34 105 RBMS2,SPRYD4,GLS2
SE_02_056900835 chr12:56516123-56541856 Sample_02_0569 Periodontal ligament mesenchymal stem cell 835 12 633 96 23 34 105 RBMS2,SPRYD4,GLS2
SE_02_049900648 chr12:56516198-56531669 Sample_02_0499 Fetal lung IMR90 IR Senescence 648 6 364 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_106700316 chr12:56516288-56537168 Sample_02_1067 Bone SJSA-1 316 7 499 65 8 34 105 RBMS2,SPRYD4,GLS2
SE_02_116600672 chr12:56516310-56538767 Sample_02_1166 Biliary H69_TGF beta_16h_1 672 9 545 80 14 34 105 RBMS2,SPRYD4,GLS2
SE_02_116700735 chr12:56516320-56537224 Sample_02_1167 Biliary H69_TGF Vehicle_1 735 7 502 66 9 34 105 RBMS2,SPRYD4,GLS2
SE_02_071200233 chr12:56516680-56537387 Sample_02_0712 Pancreas BxPC3_sgNEG 233 6 492 66 9 34 105 RBMS2,SPRYD4,GLS2
SE_02_031700511 chr12:56516680-56537505 Sample_02_0317 Neuroblastoma GICAN 511 2 496 69 11 34 105 RBMS2,SPRYD4,GLS2
SE_02_135800326 chr12:56516752-56537726 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 326 5 500 71 13 34 105 RBMS2,SPRYD4,GLS2
SE_02_135700377 chr12:56516777-56528480 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 377 12 255 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_135900399 chr12:56516854-56537861 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 399 8 501 71 13 34 105 RBMS2,SPRYD4,GLS2
SE_02_070700198 chr12:56516949-56528556 Sample_02_0707 Pancreas BxPC3 WT 198 8 252 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_152600594 chr12:56517069-56528540 Sample_02_1526 Lung PC9 DMSO 594 5 249 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_070800195 chr12:56517152-56537614 Sample_02_0708 Pancreas hF3 organoid 195 11 488 69 11 34 105 RBMS2,SPRYD4,GLS2
SE_02_136000776 chr12:56517174-56528966 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 776 5 258 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_094700554 chr12:56517188-56531195 Sample_02_0947 Tongue Cal27 554 6 325 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_01_002700565 chr12:56517195-56528236 Sample_01_0027 Prostate epithelial-cell-of-prostate 565 1 239 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_088400869 chr12:56517259-56529052 Sample_02_0884 Colon LoVo 869 1 258 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_053100401 chr12:56517288-56527661 Sample_02_0531 Mammary gland MDA-MB-231 401 8 224 17 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_107300532 chr12:56517331-56527860 Sample_02_1073 Keratinocyte keratinocytes stem cell 532 3 224 17 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_071500135 chr12:56517361-56529007 Sample_02_0715 Pancreas SUIT2_TP63dN 135 4 254 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_027000284 chr12:56517373-56531316 Sample_02_0270 Kidney PCS-400 284 6 324 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_135200954 chr12:56517432-56528114 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 954 2 230 18 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_151300198 chr12:56517446-56537583 Sample_02_1513 Lung Transitional AT2->1 cells 198 3 477 69 11 34 105 RBMS2,SPRYD4,GLS2
SE_02_147100664 chr12:56517459-56528407 Sample_02_1471 Blood Outgrowth Endothelia BOEC 664 4 235 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_127901598 chr12:56517509-56531276 Sample_02_1279 Bone Mesenchymal stem cells 1598 2 319 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_150900321 chr12:56517528-56539515 Sample_02_1509 Lung H3122_LR 321 8 536 88 17 34 105 RBMS2,SPRYD4,GLS2
SE_02_151400304 chr12:56517531-56530444 Sample_02_1514 Lung Differentiated AT1-like cells 304 6 293 24 4 34 105 RBMS2,SPRYD4,GLS2
SE_02_082601538 chr12:56517531-56539175 Sample_02_0826 Stomach gastric tumor 1538 11 527 84 15 34 105 RBMS2,SPRYD4,GLS2
SE_02_113800652 chr12:56517549-56529246 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 652 3 255 20 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_113701323 chr12:56517554-56528973 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 1323 6 246 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_053000408 chr12:56517565-56556146 Sample_02_0530 Mammary gland MCF10A 408 13 933 131 30 37 105 RBMS2,SPRYD4,GLS2
SE_02_071400049 chr12:56517569-56531656 Sample_02_0714 Pancreas SUIT2_MTV 49 6 326 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_048000670 chr12:56517570-56531063 Sample_02_0480 Gingival epithelial HGEP 670 7 310 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_072600231 chr12:56517615-56530611 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 231 12 296 26 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_113100508 chr12:56517633-56528141 Sample_02_1131 Pancreas T3M4 wt 508 5 223 18 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_088201200 chr12:56517639-56529505 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1200 4 261 20 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_061900506 chr12:56517656-56537970 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 506 2 482 71 13 34 105 RBMS2,SPRYD4,GLS2
SE_02_132100653 chr12:56517667-56530550 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 653 6 293 24 4 34 105 RBMS2,SPRYD4,GLS2
SE_02_064900390 chr12:56517710-56537622 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 390 7 472 70 12 34 105 RBMS2,SPRYD4,GLS2
SE_02_065300398 chr12:56517714-56527445 Sample_02_0653 Tracheobronchial epithelial HTBE_H5N1_03h 398 5 205 15 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_050001229 chr12:56517736-56531130 Sample_02_0500 Fetal lung IMR90_#2 1229 9 309 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_026200719 chr12:56517748-56531641 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 719 4 322 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_064800972 chr12:56517774-56528103 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 972 6 219 18 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_071600031 chr12:56517786-56573172 Sample_02_0716 Pancreas SUIT2_GFP 31 15 1310 167 36 66 371 RBMS2,SPRYD4,GLS2
SE_02_045101019 chr12:56517799-56544599 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 1019 6 664 103 24 34 105 RBMS2,SPRYD4,GLS2
SE_02_026300970 chr12:56517804-56531526 Sample_02_0263 Osteoblastic hFOB_undifferentiated 970 4 312 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_153400538 chr12:56517808-56528235 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 538 6 220 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_071900105 chr12:56517817-56531421 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 105 7 310 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_135100934 chr12:56517853-56528128 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 934 2 214 18 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_132001409 chr12:56517873-56528122 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1409 6 212 18 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_153300279 chr12:56517877-56539590 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 279 4 522 88 17 34 105 RBMS2,SPRYD4,GLS2
SE_02_088601182 chr12:56517883-56531555 Sample_02_0886 Skin foreskin_ p63KLF4 1182 2 306 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_122800583 chr12:56517887-56529752 Sample_02_1228 Mammary gland MDA-MB-231_2 583 6 257 20 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_026100893 chr12:56517890-56531708 Sample_02_0261 Osteoblastic hFOB_differentiated 893 2 313 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_058900363 chr12:56517891-56537603 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 363 11 460 69 11 34 105 RBMS2,SPRYD4,GLS2
SE_02_151200277 chr12:56517899-56539649 Sample_02_1512 Lung Purified AT2 cells 277 5 525 89 18 34 105 RBMS2,SPRYD4,GLS2
SE_02_124000571 chr12:56517948-56528325 Sample_02_1240 Skin MCC13_virus_negative 571 6 215 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_093900569 chr12:56517973-56527909 Sample_02_0939 Mammary gland MDA-MB-231_control 569 2 202 17 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_081100535 chr12:56517984-56528988 Sample_02_0811 Thyroid BCPAP 535 3 231 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_095001232 chr12:56517985-56536456 Sample_02_0950 Umbilical vein HUVEC_WT 1232 7 436 63 7 34 105 RBMS2,SPRYD4,GLS2
SE_02_088301075 chr12:56517999-56530929 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 1075 4 289 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_087800913 chr12:56518018-56537498 Sample_02_0878 Ovary SVOG3e cells_noDox_control 913 2 455 69 11 34 105 RBMS2,SPRYD4,GLS2
SE_02_143601476 chr12:56518077-56531212 Sample_02_1436 Liver LSEC-Ctrl 1476 4 295 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_072701261 chr12:56518116-56537254 Sample_02_0727 Fetal lung IMR90_Etoposide 1261 6 448 66 9 34 105 RBMS2,SPRYD4,GLS2
SE_02_105200600 chr12:56518131-56528914 Sample_02_1052 Esophagus JH-EsoAd1 600 7 225 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_065000834 chr12:56518201-56527629 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 834 7 194 16 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_088000731 chr12:56518207-56528977 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 731 3 226 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_070400100 chr12:56518212-56528152 Sample_02_0704 Pancreas HPAFII WT 100 7 205 18 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_093001379 chr12:56518239-56528804 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1379 9 221 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_065700375 chr12:56518240-56527730 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 375 4 196 17 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_087901023 chr12:56518255-56530142 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1023 5 263 20 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_070600084 chr12:56518259-56528407 Sample_02_0706 Pancreas SUIT2 WT 84 6 211 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_063800820 chr12:56518287-56529475 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 820 7 243 20 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_158300757 chr12:56518292-56536787 Sample_02_1583 Fetal lung IMR90_empty_GM 757 10 438 65 8 34 105 RBMS2,SPRYD4,GLS2
SE_02_088100974 chr12:56518293-56529478 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 974 3 243 20 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_064501544 chr12:56518390-56528062 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1544 4 200 17 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_077100731 chr12:56518405-56537163 Sample_02_0771 Ovary OVCA429_shGRHL2 731 6 442 65 8 34 105 RBMS2,SPRYD4,GLS2
SE_02_130800554 chr12:56518433-56527590 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 554 3 190 16 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_125901081 chr12:56518434-56528266 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 1081 2 206 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_059000421 chr12:56518456-56531081 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 421 8 289 27 5 34 105 RBMS2,SPRYD4,GLS2
SE_02_144600290 chr12:56518457-56528951 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 290 4 222 19 3 34 105 RBMS2,SPRYD4,GLS2
SE_02_090800657 chr12:56518548-56573220 Sample_02_0908 Heart left ventricle_DCM_LV1262 657 14 1293 167 36 66 371 RBMS2,GLS2
SE_02_089001103 chr12:56518774-56527608 Sample_02_0890 Heart left ventricle_LV1200 1103 3 186 15 3 34 105 RBMS2,GLS2
SE_02_151500850 chr12:56518909-56530412 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 850 5 260 23 4 34 105 RBMS2,GLS2
SE_02_065400066 chr12:56518933-56527564 Sample_02_0654 Tracheobronchial epithelial HTBE_H5N1_06h 66 4 178 15 3 34 105 RBMS2,GLS2
SE_02_088701175 chr12:56519097-56527696 Sample_02_0887 Heart left ventricle_LV1121 1175 4 182 15 2 34 105 RBMS2,GLS2
SE_02_064400883 chr12:56519501-56527636 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 883 5 173 15 2 33 105 RBMS2,GLS2
SE_02_062000661 chr12:56519526-56527605 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 661 4 172 14 2 33 105 RBMS2,GLS2
SE_02_130900763 chr12:56519768-56527662 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 763 2 168 15 2 33 105 RBMS2,GLS2
SE_02_006700666 chr12:56520344-56528681 Sample_02_0067 Embryo AzH-G2/M 666 1 167 13 2 23 105 RBMS2,GLS2
SE_02_081800868 chr12:56520746-56529752 Sample_02_0818 Ovary High-grade serous ovarian cancer 868 2 199 14 2 23 105 RBMS2,GLS2
SE_02_127300731 chr12:56520819-56537638 Sample_02_1273 Cervix HeLa 731 2 401 64 11 23 105 RBMS2,GLS2
SE_02_111000659 chr12:56521987-56531986 Sample_02_1110 Other HGrC1 659 5 236 21 4 22 38 RBMS2,GLS2
SE_02_058800733 chr12:56523871-56537651 Sample_02_0588 Cervix HeLa Kyoto_untreated 733 10 343 62 11 2 0 RBMS2,GLS2
SE_02_092900607 chr12:56524526-56594787 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 607 21 1693 188 39 64 1529 RBMS2,GLS2,SNORD59B,BAZ2A
Genomic distribution of SEs associated with GLS2
Genome Browser

The strength of the tissue affected by the gene

Expression of GLS2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)