SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200233
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr12:56516680-56537387
Size: 20707
Super-enhancer rank 233
Number of SE elements: 6
ChIP density(Case|Control): 33433.5222|3592.6645
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RBMS2 ;
ROSE Overlap RBMS2 ;
ROSE Proximal SPRYD4 ; GLS2 ;
ROSE Closest RBMS2 ;
Lasso ;
PreSTIGE ;
ABC ZC3H10 ; MYL6B ; RPL41 ; MYL6 ; SMARCC2 ; ESYT1 ;
BETA TIMELESS ; MIP ; RBMS2 ; GLS2 ; SPRYD4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200233 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers