SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: FLJ42627 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_021500013 chr16:2541354-2592322 Sample_02_0215 Skin NHEK_siGRHL3 13 11 706 42 0 88 1591 PDPK1,MIR3178,FLJ42627,CEMP1,LOC652276,AMDHD2,ATP6V0C
SE_02_104800729 chr16:2541454-2592248 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 729 14 703 41 0 88 1591 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_034300432 chr16:2553562-2620499 Sample_02_0343 Bone marrow HSPC_A0 432 8 1228 93 1 185 4245 PDPK1,LOC652276,MIR3178,FLJ42627,CEMP1,AMDHD2,ATP6V0C
SE_02_048700116 chr16:2559304-2594592 Sample_02_0487 Bone marrow HSCe_71y_CD34+,CD38-,Lineage- 116 11 489 31 0 53 1717 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_034400007 chr16:2559562-2633873 Sample_02_0344 Blood CD34 7 10 1250 96 1 168 4363 PDPK1,LOC652276,ATP6V0C,FLJ42627,CEMP1,MIR3178,AMDHD2,KCTD5
SE_02_048200113 chr16:2559563-2594395 Sample_02_0482 Bone marrow HSCe_18y_CD34+,CD38-,Lineage-_ 113 8 480 31 0 53 1691 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_048900255 chr16:2559637-2594647 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 255 7 490 31 0 53 1720 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_048600012 chr16:2559665-2632942 Sample_02_0486 Bone marrow HSCe_66y_CD34+,CD38-,Lineage- 12 16 1249 96 1 164 4326 PDPK1,LOC652276,CEMP1,FLJ42627,AMDHD2,ATP6V0C,KCTD5,MIR3178,ERVK13-1
SE_02_048300029 chr16:2559680-2633027 Sample_02_0483 Bone marrow HSCe_22y_CD34+,CD38-,Lineage- 29 15 1249 96 1 164 4326 PDPK1,LOC652276,CEMP1,FLJ42627,AMDHD2,ATP6V0C,KCTD5,MIR3178,ERVK13-1
SE_02_103400352 chr16:2559718-2633427 Sample_02_1034 Blood AML cell 352 7 1249 96 1 164 4326 PDPK1,LOC652276,CEMP1,FLJ42627,AMDHD2,ATP6V0C,KCTD5,MIR3178,ERVK13-1
SE_02_048400177 chr16:2559742-2594441 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 177 7 482 31 0 53 1698 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_048800070 chr16:2559772-2594366 Sample_02_0488 Bone marrow HSCe_74y_CD34+,CD38-,Lineage- 70 9 478 31 0 53 1686 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_048500137 chr16:2559900-2594340 Sample_02_0485 Bone marrow HSCe_65y_CD34+,CD38-,Lineage- 137 9 476 31 0 53 1685 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_049000093 chr16:2559918-2594448 Sample_02_0490 Bone marrow HSCe_68y_CD34+,CD38-,Lineage- 93 7 480 31 0 53 1701 PDPK1,CEMP1,FLJ42627,LOC652276,AMDHD2,ATP6V0C,MIR3178
SE_02_088601341 chr16:2568803-2631116 Sample_02_0886 Skin foreskin_ p63KLF4 1341 12 1204 96 1 129 3500 PDPK1,LOC652276,CEMP1,MIR3178,AMDHD2,FLJ42627,ERVK13-1
SE_02_138400850 chr16:2576782-2613900 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 850 6 995 88 1 111 2375 PDPK1,LOC652276,CEMP1,FLJ42627,MIR3178
SE_02_061700590 chr16:2578965-2621195 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 590 4 1038 89 1 129 3094 PDPK1,LOC652276,CEMP1,FLJ42627,MIR3178
SE_02_120100210 chr16:2584556-2602922 Sample_02_1201 Brain GBM37 210 5 604 48 0 66 1565 PDPK1,FLJ42627,LOC652276
SE_02_104901637 chr16:2584810-2613879 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1637 17 902 84 1 103 1968 PDPK1,LOC652276,FLJ42627
SE_02_139100554 chr16:2588872-2606981 Sample_02_1391 Peripheral blood FE-PD_ALK- 554 5 579 53 0 89 1663 PDPK1,LOC652276,FLJ42627
SE_02_041800262 chr16:2599063-2612881 Sample_02_0418 Embryo H9_Null+EZH2 262 2 420 42 1 65 947 PDPK1,LOC652276,FLJ42627
SE_02_010600565 chr16:2599098-2616790 Sample_02_0106 Skin NHEK_M 565 4 505 48 1 74 1530 PDPK1,LOC652276,FLJ42627
SE_02_035300844 chr16:2603384-2633142 Sample_02_0353 Colon HT29 844 5 473 42 1 49 1468 LOC652276,FLJ42627,KCTD5
SE_02_071900720 chr16:2603424-2631450 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 720 5 472 42 1 47 1462 LOC652276,FLJ42627,ERVK13-1
SE_02_027000539 chr16:2603975-2612817 Sample_02_0270 Kidney PCS-400 539 2 248 30 1 18 183 LOC652276,FLJ42627
SE_02_104801345 chr16:2605986-2637188 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1345 9 375 31 1 52 1841 LOC652276,FLJ42627,KCTD5,ERVK13-1
SE_02_048400644 chr16:2607321-2633129 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 644 7 360 30 1 20 1337 LOC652276,FLJ42627,KCTD5,ERVK13-1
SE_02_005600549 chr16:2646812-2689299 Sample_02_0056 Mammary gland HMEC 549 10 1319 200 0 127 1547 KCTD5,LOC652276,FLJ42627,PRSS27
SE_00_003500571 chr16:2650466-2688097 Sample_00_0035 Sigmoid colon sigmoid-colon 571 7 1170 190 0 127 1547 KCTD5,LOC652276,FLJ42627,PRSS27
SE_00_004101200 chr16:2650503-2683468 Sample_00_0041 Stomach stomach_3y 1200 5 1019 173 0 116 1547 KCTD5,LOC652276,FLJ42627,PRSS27
SE_02_047800625 chr16:2650608-2686204 Sample_02_0478 Colon normal colon mucosa 625 10 1092 180 0 125 1547 ERVK13-1,KCTD5,FLJ42627,LOC652276,PRSS27,PRSS21,PRSS33
SE_02_136500475 chr16:2651050-2686485 Sample_02_1365 Pancreas AsPC1-untreated 475 12 1090 181 0 126 1547 ERVK13-1,KCTD5,FLJ42627,LOC652276,PRSS27
SE_02_070500726 chr16:2651217-2686408 Sample_02_0705 Pancreas AsPC1 WT 726 13 1090 181 0 126 1547 ERVK13-1,KCTD5,FLJ42627,LOC652276,PRSS27
SE_02_077500976 chr16:2652433-2695234 Sample_02_0775 Pancreas EndoC-BH1_SE 976 11 1372 212 0 131 1547 ERVK13-1,KCTD5,FLJ42627,LOC652276,PRSS27,SRRM2-AS1
SE_02_074601230 chr16:2654758-2692448 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 1230 8 1306 206 0 127 1547 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_021101235 chr16:2657500-2676698 Sample_02_0211 Lung MRC-5_NFD_1DPT 1235 5 705 147 0 72 1373 PRSS27,FLJ42627,KCTD5
SE_00_003901153 chr16:2659133-2688188 Sample_00_0039 Spleen spleen_3y 1153 4 1018 161 0 124 1422 KCTD5,PRSS27,FLJ42627,CEP1,PDPK1,PRSS21,PRSS33,ZG16B
SE_02_061700766 chr16:2659455-2688990 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 766 7 1036 163 0 124 1392 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_038000340 chr16:2659554-2700460 Sample_02_0380 Skeletal muscle RH18 340 8 1431 202 0 139 1680 KCTD5,PRSS27,LOC100128788,FLJ42627
SE_02_138800458 chr16:2660505-2686202 Sample_02_1388 Peripheral blood JB6_ALK+ 458 6 888 140 0 111 1233 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_00_005100800 chr16:2660718-2692992 Sample_00_0051 Adrenal gland adrenal gland 30y 800 11 1124 166 0 116 1206 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_01_006900985 chr16:2662578-2693668 Sample_01_0069 Adrenal gland adrenal-gland 985 6 1072 150 0 117 986 KCTD5,PRSS27,FLJ42627
SE_01_005400414 chr16:2662621-2689907 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 414 3 913 136 0 114 982 KCTD5,PRSS27,FLJ42627
SE_02_138600065 chr16:2662704-2691083 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 65 5 971 142 0 114 970 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_099401008 chr16:2662845-2687906 Sample_02_0994 Blood MOLM13_SIK3TQ 1008 8 863 129 0 113 961 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_01_004101017 chr16:2662934-2687046 Sample_01_0041 Skin keratinocyte 1017 5 811 126 0 113 949 KCTD5,PRSS27,FLJ42627
SE_02_048102093 chr16:2663035-2687127 Sample_02_0481 Mammary gland MDA-MB231 2093 5 810 127 0 113 941 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_122901012 chr16:2663050-2693974 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1012 18 1069 151 0 117 938 ERVK13-1,KCTD5,FLJ42627,PRSS27,PRSS21,TCEB2,SRRM2
SE_02_036600478 chr16:2663067-2694471 Sample_02_0366 Skeletal muscle NCI0082 478 3 1073 151 0 117 934 KCTD5,PRSS27,FLJ42627
SE_02_146600571 chr16:2663101-2683933 Sample_02_1466 Blood HUDEP-2_BCL11AKO 571 3 712 112 0 103 931 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_034300675 chr16:2663111-2694202 Sample_02_0343 Bone marrow HSPC_A0 675 7 1072 151 0 117 930 KCTD5,PRSS27,FLJ42627
SE_02_016400386 chr16:2663123-2687074 Sample_02_0164 Lung H2087_Parental 386 4 808 127 0 113 928 KCTD5,PRSS27,FLJ42627
SE_02_016500309 chr16:2663123-2687074 Sample_02_0165 Lung H2087_LCC2 309 4 808 127 0 113 928 KCTD5,PRSS27,FLJ42627
SE_02_072000218 chr16:2663127-2685560 Sample_02_0720 Pancreas AsPC1_TP63dN_DOX 218 9 777 118 0 107 927 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_047900929 chr16:2663129-2689612 Sample_02_0479 Head and neck SCC25 929 12 889 132 0 114 927 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_105700417 chr16:2663439-2686129 Sample_02_1057 Esophagus GihTRT 417 4 769 116 0 111 894 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_033700484 chr16:2663549-2694502 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 484 6 1053 148 0 117 881 KCTD5,PRSS27,FLJ42627
SE_02_025500672 chr16:2663617-2697168 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 672 6 1111 157 0 122 987 KCTD5,PRSS27,LOC100128788,FLJ42627
SE_02_139400379 chr16:2664115-2680524 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 379 6 562 98 0 73 707 ERVK13-1,FLJ42627,KCTD5,PRSS27
SE_02_142400321 chr16:2664180-2686236 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 321 3 738 110 0 111 881 ERVK13-1,KCTD5,FLJ42627,PRSS27,PRSS21,TCEB2,SRRM2
SE_02_119800704 chr16:2669877-2694354 Sample_02_1198 Brain GBM34 704 8 816 102 0 117 782 ERVK13-1,KCTD5,FLJ42627,PRSS27
SE_02_118400441 chr16:2669941-2704230 Sample_02_1184 Brain GBM13 441 8 1177 135 0 134 1167 ERVK13-1,KCTD5,SRRM2,FLJ42627,PRSS27,SRRM2-AS1
SE_02_032300219 chr16:2670278-2687271 Sample_02_0323 Colon RKO 219 1 551 77 0 113 706 KCTD5,PRSS27,FLJ42627
SE_00_000600924 chr16:2670379-2689271 Sample_00_0006 Blood CD14-positive-monocyte 924 3 607 79 0 113 694 KCTD5,PRSS27,FLJ42627
SE_02_034700456 chr16:2670404-2694221 Sample_02_0347 Blood AML11 456 6 795 99 0 117 694 KCTD5,PRSS27,FLJ42627
SE_02_005000225 chr16:2671098-2694213 Sample_02_0050 Skin BJ 225 5 777 90 0 117 580 KCTD5,PRSS27,FLJ42627
SE_02_042700264 chr16:2672114-2686831 Sample_02_0427 Colon HCT116_shPAF1 264 1 448 57 0 108 435 KCTD5,PRSS27,FLJ42627
SE_02_025000106 chr16:2672367-2704077 Sample_02_0250 Brain tumormodel3691 106 7 1077 116 0 128 789 KCTD5,LOC100128788,FLJ42627,SRRM2,PRSS27
SE_00_003400725 chr16:2672440-2694507 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 725 5 720 83 0 111 391 KCTD5,PRSS27,FLJ42627
SE_02_137200389 chr16:2675385-2686165 Sample_02_1372 Pancreas PSN1-untreated 389 8 332 29 0 50 174 KCTD5,FLJ42627,ERVK13-1,PRSS27
SE_02_041800173 chr16:2677567-2694856 Sample_02_0418 Embryo H9_Null+EZH2 173 3 553 52 0 56 174 KCTD5,PRSS27,LOC100128788,FLJ42627
SE_02_147000677 chr16:2677608-2687483 Sample_02_1470 Umbilical Vein H441 677 3 308 28 0 52 174 KCTD5,FLJ42627,ERVK13-1,PRSS27
SE_02_044100424 chr16:2677787-2694406 Sample_02_0441 Bone M112 424 10 551 52 0 56 174 KCTD5,FLJ42627,ERVK13-1,PRSS27
SE_02_104800334 chr16:2677905-2742882 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 334 13 2165 132 0 152 2560 SRRM2-AS1,KCTD5,PRSS27,TCEB2,SRRM2,PRSS33,FLJ42627,ERVK13-1
SE_02_071900710 chr16:2678002-2686750 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 710 4 259 21 0 51 174 KCTD5,FLJ42627,ERVK13-1,PRSS27
SE_02_043900357 chr16:2678754-2693935 Sample_02_0439 Bone Hu09 357 7 509 47 0 54 174 KCTD5,FLJ42627,ERVK13-1,PRSS27
SE_02_121200441 chr16:2680166-2694372 Sample_02_1212 Brain GBM30 441 3 479 45 0 46 174 KCTD5,FLJ42627,ERVK13-1,PRSS27
SE_02_025600849 chr16:2681582-2696592 Sample_02_0256 Peripheral blood MV411 849 1 455 44 0 42 280 KCTD5,PRSS27,LOC100128788,FLJ42627
SE_02_127801052 chr16:2681701-2694069 Sample_02_1278 Chordoma UCH1_DMSO_48h 1052 1 428 43 0 37 174 KCTD5,FLJ42627,ERVK13-1,PRSS27
SE_02_027000626 chr16:2682897-2694792 Sample_02_0270 Kidney PCS-400 626 3 391 41 0 16 28 KCTD5,PRSS27,FLJ42627
SE_02_119601313 chr16:2685815-2716023 Sample_02_1196 Brain GBM32 1313 7 1127 76 0 92 1602 KCTD5,PRSS27,SRRM2,FLJ42627,SRRM2-AS1,ERVK13-1
SE_02_117300777 chr16:2685874-2715985 Sample_02_1173 Brain GBM01 777 14 1126 76 0 92 1584 KCTD5,PRSS27,SRRM2,FLJ42627,SRRM2-AS1,ERVK13-1
Genomic distribution of SEs associated with FLJ42627
Genome Browser

The strength of the tissue affected by the gene

Expression of FLJ42627

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)