Sample overview


Search result

SE ID SE Region Size Rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_034400244 chr1:1135686-1164004 28318 244 4 1071 105 1 31 766 MIR429,MIR200B,TTLL10,C1ORF159,TNFRSF18,MIR200A
SE_02_034400307 chr1:120011679-120025652 13973 307 6 282 14 0 67 0 NOTCH2
SE_02_034400218 chr1:12161030-12185311 24281 218 6 685 20 1 54 160 TNFRSF1B,VPS13D,TNFRSF8
SE_02_034400315 chr1:146171088-146185066 13978 315 7 46 6 0 69 0 NOTCH2NL,NBPF10
SE_02_034400222 chr1:153771276-153802917 31641 222 5 910 52 7 125 1617 SLC27A3,INTS3
SE_02_034400241 chr1:155966072-155980424 14352 241 6 292 9 0 129 744 ARHGEF2,SCARNA4,SSR2,RXFP4,SNORA42,KIAA0907
SE_02_034400311 chr1:156095482-156107815 12333 311 4 272 10 1 77 0 ROBLD3,RAB25,SEMA4A,LMNA,UBQLN4,MEX3A
SE_02_034400137 chr1:156487497-156506204 18707 137 7 476 22 3 197 368 MEF2D
SE_02_034400325 chr1:156742686-156751833 9147 325 3 235 15 1 112 824 HDGF,C1ORF66,PRCC,ISG20L2,MRPL24,CRABP2
SE_02_034400182 chr1:15834403-15854109 19706 182 4 537 58 4 84 709 SPEN,FLJ37453,UQCRHL
SE_02_034400157 chr1:159908131-159926406 18275 157 5 453 25 2 143 912 TAGLN2,SLAMF9,CCDC19,IGSF9,VSIG8
SE_02_034400033 chr1:1657365-1702426 45061 33 5 1408 117 0 80 2807 MMP23A,CDK11B,SLC35E2B,SLC35E2,MIB2,MMP23B,CDK11A
SE_02_034400204 chr1:1889832-1909968 20136 204 4 560 51 1 47 201 GNB1,TMEM52,CALML6
SE_02_034400321 chr1:203273220-203297526 24306 321 4 686 65 0 65 0 CHIT1,LOC730227,BTG2
SE_02_034400121 chr1:21891956-21922152 30196 121 7 872 59 2 114 151 HSPG2
SE_02_034400300 chr1:2296636-2307037 10401 300 1 408 19 1 58 723 SKI,LOC100129534
SE_02_034400278 chr1:234721669-234733578 11909 278 4 336 19 1 47 673 NCRNA00184,IRF2BP2
SE_02_034400298 chr1:234842473-234879272 36799 298 6 1033 10 1 48 0 NCRNA00184,IRF2BP2
SE_02_034400102 chr1:234955079-234995355 40276 102 10 1235 61 6 182 308 SNORA14B
SE_02_034400297 chr1:243474138-243508783 34645 297 7 941 24 6 231 703 SDCCAG8,AKT3
SE_02_034400310 chr1:25020277-25035432 15155 310 4 453 28 1 71 0 RUNX3
SE_02_034400139 chr1:2542718-2558680 15962 139 3 609 33 0 43 1654 LOC115110,TNFRSF14,PANK4,HES5,C1ORF93
SE_02_034400131 chr1:26277468-26298186 20718 131 4 633 90 5 96 1910 UBXN11,SH3BGRL3,CCDC21,CD52
SE_02_034400252 chr1:26538134-26557729 19595 252 3 559 42 1 0 1308 RPS6KA1,MIR1976
SE_02_034400306 chr1:26692381-26698513 6132 306 2 121 9 1 300 600 ARID1A
SE_02_034400020 chr1:27521177-27600337 79160 20 14 1984 93 4 1193 1816 AHDC1,WASF2,FGR
SE_02_034400267 chr1:27614945-27635987 21042 267 4 521 26 1 104 1208 FGR,IFI6,AHDC1
SE_02_034400134 chr1:27858237-27890246 32009 134 8 904 92 2 52 1000 C1ORF38,PPP1R8,RPA2,SCARNA1,SMPDL3B
SE_02_034400144 chr1:30740633-30765314 24681 144 8 794 45 1 35 327 LAPTM5,MATN1,LOC100129196
SE_02_034400048 chr1:3509579-3555000 45421 48 7 1718 43 0 80 1091 MEGF6,MIR551A
SE_02_034400126 chr1:36150129-36177163 27034 126 4 696 34 1 321 1044 MAP7D1,THRAP3,COL8A2,TRAPPC3
SE_02_034400220 chr1:44404939-44431575 26636 220 4 654 36 0 424 391 RNF220,ERI3
SE_02_034400143 chr1:44802329-44830243 27914 143 3 879 69 4 280 3362 PTCH2,BTBD19,PLK3,TCTEX1D4,SNORD55,BEST4,SNORD46,SNORD38A,SNORD38B,RPS8
SE_02_034400055 chr10:102599106-102652591 53485 55 8 1249 128 22 472 1692 SUFU,TRIM8
SE_02_034400291 chr10:11161692-11181365 19673 291 5 596 23 8 116 201 CELF2
SE_02_034400006 chr10:124601499-124682550 81051 6 16 2573 193 10 204 2194 FAM53B,LHPP
SE_02_034400253 chr10:132409693-132424589 14896 253 6 554 30 0 24 264 PWWP2B,C10ORF91
SE_02_034400326 chr10:132544849-132556649 11800 326 4 426 8 1 6 0 INPP5A
SE_02_034400119 chr10:133257231-133282076 24845 119 4 953 92 0 73 2976 TUBGCP2,ADAM8,UTF1,MIR202,ZNF511,VENTX
SE_02_034400026 chr10:48449230-48521141 71911 26 12 2149 208 9 94 1948 ARHGAP22,MAPK8
SE_02_034400027 chr10:71695113-71771299 76186 27 12 2382 177 12 253 4669 CDH23,C10ORF105,C10ORF54
SE_02_034400074 chr10:72295840-72337532 41692 74 9 1168 81 0 111 807 DNAJB12,DDIT4
SE_02_034400001 chr10:79068711-79190532 121821 1 29 3589 99 44 583 803 ZMIZ1,LOC283050
SE_02_034400041 chr10:79245874-79302572 56698 41 10 1813 54 17 236 1812 ZMIZ1,PPIF
SE_02_034400270 chr11:118911993-118930699 18706 270 8 434 37 3 290 0 CXCR5,BCL9L,UPK2,FOXR1
SE_02_034400286 chr11:126317672-126348692 31020 286 4 912 106 3 86 557 DCPS,FLJ39051,FOXRED1,TIRAP,SRPR,ST3GAL4
SE_02_034400211 chr11:1925258-1950593 25335 211 3 858 38 1 79 1395 MRPL23,TNNT3,MIR675,LOC100133545,H19
SE_02_034400069 chr11:2377428-2408201 30773 69 6 1167 126 2 122 2510 TSSC4,CD81,TRPM5,KCNQ1
SE_02_034400263 chr11:309927-327661 17734 263 3 524 79 1 9 944 IFITM3,IFITM1,ATHL1,B4GALNT4,IFITM5,NLRP6,IFITM2
SE_02_034400053 chr11:46341713-46381590 39877 53 6 1098 64 3 350 3722 DGKZ,MDK,CHRM4
SE_02_034400018 chr11:47358202-47425446 67244 18 9 1826 210 11 388 2965 SLC39A13,SPI1,PSMC3,RAPSN,MYBPC3
SE_02_034400130 chr11:62542038-62557679 15641 130 5 377 27 1 173 185 AHNAK,EEF1G,TUT1,MTA2
SE_02_034400210 chr11:64265072-64287254 22182 210 3 565 43 2 121 2262 BAD,GPR137,PLCB3,PRDX5,TRMT112,ESRRA,FKBP2,C11ORF20,NUDT22,KCNK4,VEGFB,TRPT1,DNAJC4,PPP1R14B
SE_02_034400145 chr11:64740445-64767939 27494 145 3 787 42 4 451 3916 RASGRP2,SF1,PYGM,MEN1,NRXN2,MAP4K2
SE_02_034400078 chr11:64834013-64879712 45699 78 7 1431 103 0 311 3147 CDC42BPG,EHD1,ATG2A,MEN1,MAP4K2,PPP2R5B,MIR194-2,MIR192
SE_02_034400085 chr11:65468843-65501009 32166 85 7 921 112 4 19 409 MALAT1,NEAT1,MIR612,SCYL1
SE_02_034400187 chr11:65525067-65556404 31337 187 4 820 42 0 365 4321 LTBP3,SCYL1,MALAT1,EHBP1L1,SSSCA1,FAM89B,KCNK7
SE_02_034400309 chr11:65914873-65932587 17714 309 5 538 60 0 153 1199 C11ORF68,DRAP1,CCDC85B,CTSW,EFEMP2,SART1,TSGA10IP,FIBP,FOSL1
SE_02_034400223 chr11:67268695-67277592 8897 223 1 254 15 0 55 103 ADRBK1,ANKRD13D,SSH3,LOC100130987
SE_02_034400063 chr11:67277723-67292652 14929 63 1 416 23 0 185 2347 ANKRD13D,ADRBK1,SSH3,LOC100130987
SE_02_034400154 chr11:67402112-67422168 20056 154 2 540 47 1 151 2511 CARNS1,TBC1D10C,CLCF1,PPP1CA,CABP4,RPS6KB2,PTPRCAP,CORO1B,GPR152,TMEM134,POLD4,RAD9A
SE_02_034400299 chr11:68030677-68045548 14871 299 3 507 26 1 92 1890 TCIRG1,NDUFS8,UNC93B1,ALDH3B1
SE_02_034400124 chr11:68824806-68855980 31174 124 9 922 104 1 55 170 CPT1A,IGHMBP2,MRPL21
SE_02_034400136 chr11:69048675-69088101 39426 136 5 1558 200 9 53 2539 TPCN2,MRGPRF
SE_02_034400238 chr11:69294050-69313572 19522 238 5 667 38 2 71 639 MYEOV
SE_02_034400140 chr11:72806455-72829597 23142 140 6 670 44 1 91 2120 ATG16L2,STARD10
SE_02_034400248 chr11:73140505-73154145 13640 248 4 319 14 2 107 174 FCHSD2
SE_02_034400229 chr11:73307541-73326536 18995 229 3 560 50 3 201 933 ARHGEF17,RELT,P2RY6
SE_02_034400099 chr11:75319068-75352882 33814 99 6 854 42 2 152 251 ARRB1,MIR326,SNORD15A,RPS3
SE_02_034400031 chr12:111403658-111448438 44780 31 10 1052 95 10 124 979 SH2B3,FAM109A
SE_02_034400269 chr12:11742773-11774436 31663 269 9 875 22 6 174 93 ETV6
SE_02_034400186 chr12:11797166-11837220 40054 186 9 1128 29 5 169 0 ETV6
SE_02_034400142 chr12:122975261-122998653 23392 142 5 755 41 0 255 4179 PITPNM2,ARL6IP4,OGFOD2,ABCB9,MIR4304
SE_02_034400127 chr12:124420605-124466946 46341 127 7 1511 34 3 69 917 NCOR2
SE_02_034400008 chr12:124480942-124555836 74894 8 13 2553 95 6 157 1320 NCOR2
SE_02_034400072 chr12:132464623-132509384 44761 72 8 1604 110 2 59 365 FBRSL1
SE_02_034400114 chr12:47801915-47834155 32240 114 6 830 70 2 242 296 HDAC7,RAPGEF3,SLC48A1
SE_02_034400079 chr12:6328505-6371440 42935 79 7 1292 80 17 157 2339 PLEKHG6,SCNN1A,TNFRSF1A,LTBR
SE_02_034400266 chr12:6531965-6551963 19998 266 3 693 69 1 139 2075 GAPDH,NCAPD2,IFFO1,MRPL51,NOP2,SCARNA11,SCARNA10
SE_02_034400308 chr12:6954089-6964201 10112 308 1 342 16 2 111 1220 PTPN6,MIR141,MIR200C,SCARNA12,C12ORF57,PHB2,ATN1,LRRC23,EMG1,ENO2
SE_02_034400264 chr13:114048112-114069468 21356 264 4 809 91 0 9 266 RASA3
SE_02_034400296 chr13:114119207-114143256 24049 296 5 703 52 3 50 193 RASA3
SE_02_034400203 chr14:100284067-100308383 24316 203 4 681 51 1 58 1158 MIR345,SLC25A29,YY1,SLC25A47
SE_02_034400116 chr14:104676517-104704304 27787 116 4 925 82 2 73 760 INF2,ADSSL1,SIVA1
SE_02_034400100 chr14:104782164-104817126 34962 100 3 1068 84 4 170 1679 AKT1,ZBTB42,MGC23270,KIAA0284,SIVA1
SE_02_034400160 chr14:105058540-105078088 19548 160 5 641 47 0 6 102 GPR132,CDCA4
SE_02_034400081 chr14:105481065-105490988 9923 81 1 282 27 0 35 721 C14ORF80,CRIP1,TMEM121,CRIP2
SE_02_034400012 chr14:105862535-105920509 57974 12 6 4277 302 0 11 11796 KIAA0125
SE_02_034400023 chr14:73725631-73778168 52537 23 8 1323 157 1 314 1764 C14ORF43,PNMA1
SE_02_034400281 chr14:76909047-76929388 20341 281 6 567 20 1 109 0 C14ORF166B,ANGEL1
SE_02_034400232 chr14:77025420-77044543 19123 232 6 507 33 7 407 847 C14ORF4
SE_02_034400133 chr14:91363660-91400780 37120 133 10 1201 82 9 105 257 CCDC88C
SE_02_034400097 chr14:92648047-92670907 22860 97 8 723 28 17 44 875 RIN3,LGMN
SE_02_034400293 chr14:95485202-95517680 32478 293 5 991 68 3 76 0 GLRX5,C14ORF49,SCARNA13,SNHG10
SE_02_034400065 chr15:31325141-31367644 42503 65 9 1335 65 3 292 373 KLF13
SE_02_034400190 chr15:40322373-40341139 18766 190 3 566 60 4 248 2506 C15ORF52,PHGR1,LOC100131244,DISP2,C15ORF23,PLCB2
SE_02_034400199 chr15:67089277-67121727 32450 199 7 926 51 5 112 0 SMAD3
SE_02_034400098 chr15:74775229-74800304 25075 98 7 593 72 2 201 778 CSK,ULK3,CYP1A1,CPLX3,LMAN1L,CYP1A2
SE_02_034400111 chr15:90031457-90068743 37286 111 10 1173 86 3 136 366 ZNF710,IDH2
SE_02_034400135 chr15:90870798-90894613 23815 135 4 768 67 8 385 3467 FES,FURIN,UNC45A,MAN2A2,HDDC3
SE_02_034400271 chr15:93028782-93052738 23956 271 4 1102 2 4 87 762 RGMA
SE_02_034400109 chr16:16060164-16103053 42889 109 7 1404 95 10 34 767 ABCC1
SE_02_034400261 chr16:2466571-2488429 21858 261 4 624 21 0 187 953 TBC1D24,NTN3,PDPK1,C16ORF59,ATP6V0C,MIR3178,CEMP1,CCNF,AMDHD2
SE_02_034400206 chr16:2506800-2519953 13153 206 2 390 14 0 76 447 ATP6V0C,PDPK1,C16ORF59,MIR3178,CEMP1,TBC1D24,NTN3,AMDHD2
SE_02_034400007 chr16:2559562-2633873 74311 7 10 1250 96 1 168 4363 PDPK1,LOC652276,ATP6V0C,FLJ42627,CEMP1,MIR3178,AMDHD2,KCTD5
SE_02_034400052 chr16:29116756-29160880 44124 52 7 1598 253 10 0 13 RRN3P2
SE_02_034400035 chr16:29586100-29632292 46192 35 7 1036 45 0 62 488 SLC7A5P1,QPRT,LOC440354,SPN
SE_02_034400146 chr16:29654328-29681425 27097 146 7 739 47 10 28 1511 SPN,QPRT,SLC7A5P1
SE_02_034400174 chr16:31107931-31130886 22955 174 4 616 44 9 151 1743 MYST1,BCKDK,PRSS53,VKORC1,FUS,ZNF668,PRSS36,ZNF646,PRSS8
SE_02_034400208 chr16:4659337-4692864 33527 208 5 1670 152 2 73 2247 MGRN1,C16ORF71,NUDT16L1,ANKS3,FAM100A
SE_02_034400058 chr16:50262311-50305907 43596 58 7 1306 61 1 111 1641 ADCY7
SE_02_034400108 chr16:70679979-70706609 26630 108 3 792 86 0 180 1833 VAC14,MTSS1L,LOC100130894
SE_02_034400260 chr16:70734905-70755551 20646 260 4 717 68 1 101 259 VAC14,LOC100130894,MTSS1L
SE_02_034400181 chr16:85303399-85336463 33064 181 7 1305 10 2 54 77 LOC400548
SE_02_034400021 chr16:85514390-85579413 65023 21 13 2387 45 0 322 0 KIAA0182
SE_02_034400180 chr16:85610730-85628754 18024 180 4 761 1 0 124 312 KIAA0182
SE_02_034400025 chr16:88899144-88941670 42526 25 4 2053 231 3 155 329 CBFA2T3,PABPN1L,TRAPPC2L,GALNS
SE_02_034400046 chr16:88958404-89004770 46366 46 7 1853 121 4 97 237 CBFA2T3
SE_02_034400314 chr17:1574665-1607317 32652 314 4 1331 61 0 118 1482 SLC43A2,RILP,PITPNA,SCARF1
SE_02_034400003 chr17:17680819-17800208 119389 3 24 3182 178 2 661 2430 SMCR5,RAI1,MIR33B,SREBF1
SE_02_034400237 chr17:17823710-17848884 25174 237 4 657 70 4 62 1260 SREBF1,TOM1L2,MIR33B,SMCR5
SE_02_034400092 chr17:21283118-21312563 29445 92 2 832 40 3 125 1425 MAP2K3,C17ORF103
SE_02_034400213 chr17:2386833-2401147 14314 213 4 439 32 0 267 961 MNT,TSR1,SGSM2,LOC284009
SE_02_034400164 chr17:29124261-29149956 25695 164 6 630 44 4 138 153 MYO18A,TIAF1
SE_02_034400093 chr17:30705229-30731467 26238 93 6 725 89 0 0 180 SUZ12P
SE_02_034400014 chr17:3902859-3974787 71928 14 13 2398 238 7 350 3926 ATP2A3,P2RX1,CAMKK1
SE_02_034400029 chr17:40315483-40363656 48173 29 7 1115 63 0 581 2745 GJD3,RARA,CDC6
SE_02_034400301 chr17:42552041-42568313 16272 301 3 506 48 0 120 1901 COASY,MLX,HSD17B1,PSMC3IP,FAM134C,TUBG1,NAGLU
SE_02_034400173 chr17:45143093-45174260 31167 173 4 823 58 6 253 1987 HEXIM1,ACBD4,HEXIM2,FMNL1,PLCD3
SE_02_034400071 chr17:45220812-45249234 28422 71 3 753 52 1 287 3112 LOC100133991,FMNL1,C17ORF46
SE_02_034400328 chr17:50917094-50951286 34192 328 4 985 98 1 115 0 TOB1,WFIKKN2
SE_02_034400110 chr17:57432171-57463889 31718 110 10 904 33 5 147 0 MSI2
SE_02_034400107 chr17:58325989-58344649 18660 107 4 571 34 4 153 993 BZRAP1,MIR142,MPO,SUPT4H1
SE_02_034400217 chr17:63982918-64019155 36237 217 8 1061 45 1 88 1591 C17ORF72,ICAM2,SCN4A
SE_02_034400231 chr17:7203363-7222370 19007 231 4 426 42 4 344 1765 ACADVL,DLG4,CTDNEP1,ASGR1,CLDN7,DVL2,PHF23,GABARAP,MIR324,C17ORF81
SE_02_034400189 chr17:7455483-7484101 28618 189 4 816 77 3 343 2463 CHRNB1,ZBTB4,AMAC1L3,FGF11,POLR2A,C17ORF74,TMEM102,NLGN2,SPEM1
SE_02_034400178 chr17:75485218-75515821 30603 178 5 959 91 1 396 5322 CASKIN2,KIAA0195,TSEN54,LLGL2
SE_02_034400176 chr17:75567882-75597239 29357 176 5 1183 208 1 152 3190 LLGL2,MYO15B,LOC643008,LOC100130933
SE_02_034400159 chr17:75825792-75848538 22746 159 4 869 85 6 186 3626 WBP2,UNC13D,UNK,TRIM47,H3F3B,TRIM65
SE_02_034400167 chr17:75862284-75900224 37940 167 3 1056 115 10 189 2382 MRPL38,TRIM47,TRIM65,UNC13D,WBP2,FBF1
SE_02_034400013 chr17:77388848-77468323 79475 13 11 2716 143 1 187 960 SEPT9,MIR4316,9-SEP
SE_02_034400196 chr17:78120888-78139574 18686 196 4 725 62 0 0 3087 TMC8,TMC6,C17ORF99,AFMID,SYNGR2,TK1
SE_02_034400255 chr17:78317469-78354086 36617 255 5 1138 10 1 166 0 PGS1,SOCS3
SE_02_034400123 chr17:7833921-7857541 23620 123 4 752 38 2 631 2877 KDM6B,TMEM88,LSMD1,SCARNA21,CYB5D1,CHD3
SE_02_034400282 chr17:78874259-78892759 18500 282 4 697 54 5 49 406 TIMP2,USP36
SE_02_034400184 chr17:80824674-80861126 36452 184 6 1352 41 4 45 428 RPTOR,CHMP6
SE_02_034400004 chr17:81385979-81489765 103786 4 17 3492 259 2 803 4809 BAHCC1,MIR3186,FSCN2,ACTG1
SE_02_034400183 chr17:81858293-81872629 14336 183 3 492 36 0 94 1359 P4HB,ARHGDIA,PCYT2,THOC4,NPB,ANAPC11,SIRT7,FAM195B,DYSFIP1
SE_02_034400148 chr17:82215683-82241974 26291 148 4 1012 116 1 65 1719 SLC16A3,CCDC57,CSNK1D
SE_02_034400150 chr17:82291675-82316729 25054 150 7 870 68 1 5 708 CD7,CSNK1D,TEX19,SECTM1
SE_02_034400215 chr17:82844941-82884109 39168 215 7 1502 229 1 0 110 TBCD,ZNF750
SE_02_034400201 chr18:77051794-77079463 27669 201 9 938 58 1 7 40 MBP
SE_02_034400288 chr18:77098455-77120536 22081 288 6 712 14 2 23 41 MBP
SE_02_034400287 chr18:79392918-79406195 13277 287 3 482 55 2 125 507 NFATC1
SE_02_034400254 chr19:10809240-10833386 24146 254 3 787 28 1 83 2200 TMED1,MIR199A1,DNM2,CARM1,C19ORF38
SE_02_034400192 chr19:1087724-1109561 21837 192 4 954 107 3 90 2460 POLR2E,SBNO2,GPX4,HMHA1,ABCA7
SE_02_034400105 chr19:1205732-1236839 31107 105 6 1123 55 3 152 3003 C19ORF26,STK11,CIRBP,C19ORF23,ATP5D,EFNA2,SBNO2,MIDN,C19ORF24
SE_02_034400067 chr19:1249809-1273817 24008 67 6 875 27 1 259 2693 C19ORF23,CIRBP,MIDN,ATP5D,STK11,C19ORF26,EFNA2,C19ORF24
SE_02_034400104 chr19:12777924-12794402 16478 104 6 374 30 0 303 517 JUNB,ASNA1,HOOK2,RNASEH2A,PRDX2,RTBDN,C19ORF43,MAST1,BEST2
SE_02_034400272 chr19:12936225-12954766 18541 272 5 583 30 5 201 1726 RAD23A,CALR,GADD45GIP1,KLF1,GCDH,SYCE2,NFIX,FARSA,DAND5
SE_02_034400128 chr19:13089197-13106104 16907 128 5 388 21 0 307 2238 TRMT1,NFIX,LYL1,IER2,NACC1,STX10
SE_02_034400227 chr19:13151852-13172732 20880 227 5 551 39 2 98 519 IER2,TRMT1,NACC1,LYL1,STX10
SE_02_034400149 chr19:13834793-13845650 10857 149 1 346 24 1 125 422 LOC284454,MIR24-2,MIR23A,MIR27A,MIR181C,ZSWIM4,MIR181D,NANOS3
SE_02_034400171 chr19:13977555-14003566 26011 171 4 762 13 1 86 859 RFX1,IL27RA,DCAF15,RLN3,PODNL1
SE_02_034400113 chr19:14355235-14384641 29406 113 9 891 47 1 39 167 CD97,PKN1,DDX39
SE_02_034400043 chr19:16105039-16153753 48714 43 9 1459 146 3 85 2477 RAB8A,HSH2D,TPM4,AP1M1,FAM32A,CIB3
SE_02_034400047 chr19:18279547-18320798 41251 47 5 1234 108 5 133 1364 MIR3188,JUND,LSM4,PDE4C,LOC729966,KIAA1683,PGPEP1
SE_02_034400155 chr19:18414478-18433862 19384 155 3 554 39 2 115 1434 SSBP4,ISYNA1,GDF15,MIR3189,LRRC25
SE_02_034400177 chr19:1849529-1860140 10611 177 1 325 36 1 55 756 KLF16,REXO1,ATP8B3,LOC100288123,ADAT3,SCAMP4,MIR1909,FAM108A1
SE_02_034400091 chr19:1939953-1971767 31814 91 6 1368 99 0 38 965 CSNK1G2,C19ORF34,SCAMP4,ADAT3,BTBD2
SE_02_034400132 chr19:19451942-19490582 38640 132 6 1081 72 13 46 129 GATAD2A,TSSK6,CILP2,NDUFA13,YJEFN3
SE_02_034400240 chr19:1988916-2015775 26859 240 4 1094 83 3 23 823 BTBD2,CSNK1G2,C19ORF34,MKNK2
SE_02_034400017 chr19:2037654-2094681 57027 17 8 2046 75 3 131 2981 MKNK2,MOBKL2A,BTBD2,IZUMO4
SE_02_034400087 chr19:2263709-2295964 32255 87 7 1076 65 2 137 2207 LINGO3,C19ORF35,OAZ1,AMH,SPPL2B,JSRP1,LSM7,PLEKHJ1,MIR1227,MIR4321,SF3A2
SE_02_034400050 chr19:2321562-2354997 33435 50 6 1332 97 2 48 2752 SPPL2B,LSM7,LINGO3,C19ORF35,TMPRSS9
SE_02_034400327 chr19:2613389-2628163 14774 327 4 467 22 0 0 0 GNG7
SE_02_034400059 chr19:3112760-3156307 43547 59 8 1697 162 1 51 2080 GNA15,GNA11,AES,NCLN,S1PR4
SE_02_034400158 chr19:3171246-3193991 22745 158 5 906 64 1 51 965 S1PR4,NCLN,CELF5,GNA15
SE_02_034400316 chr19:3534218-3557635 23417 316 4 1121 70 2 54 2629 FZR1,C19ORF28,C19ORF71,GIPC3,DOHH,HMG20B,TBXA2R
SE_02_034400165 chr19:39397153-39411635 14482 165 4 349 20 0 196 1309 ZFP36,MED29,PLEKHG2,SUPT5H,RPS16,PAF1
SE_02_034400246 chr19:40393865-40435007 41142 246 5 1138 83 2 294 2137 SERTAD1,PRX,SPTBN4,SERTAD3,PLD3,BLVRB,HIPK4,C19ORF47
SE_02_034400089 chr19:4057816-4091307 33491 89 4 947 46 0 175 515 MAP2K2,ZBTB7A
SE_02_034400151 chr19:40798944-40845054 46110 151 5 1458 176 27 198 1923 EGLN2,CYP2A6,CYP2A7,MIA,SNRPA,C19ORF54,RAB4B
SE_02_034400138 chr19:41863383-41895969 32586 138 7 948 83 1 102 2252 ARHGEF1,CD79A,RPS19,LYPD4,DMRTC2
SE_02_034400323 chr19:42269450-42282682 13232 323 3 275 18 1 320 103 CIC,MEGF8,PAFAH1B3,PRR19,TMEM145,ZNF526,ERF,GSK3A
SE_02_034400289 chr19:45092920-45118944 26024 289 4 872 110 0 36 171 ZNF296,NKPD1,GEMIN7
SE_02_034400054 chr19:45419834-45471060 51226 54 11 1419 150 1 297 849 FOSB,ERCC1,PPM1N,ERCC2,PPP1R13L,RTN2,CD3EAP,VASP
SE_02_034400112 chr19:55226553-55256762 30209 112 6 1197 43 6 154 2589 PPP6R1,TMEM86B,SYT5,HSPBP1,PTPRH,BRSK1
SE_02_034400117 chr19:56098701-56121652 22951 117 7 854 29 3 59 569 ZNF787,ZNF444
SE_02_034400195 chr19:6214318-6244279 29961 195 5 1077 27 1 48 729 MLLT1
SE_02_034400256 chr19:650952-663314 12362 256 2 578 20 0 24 486 RNF126,POLRMT,FSTL3,PRSSL1,PALM,FGF22
SE_02_034400096 chr19:8485468-8514899 29431 96 5 956 110 5 142 2554 ZNF414,PRAM1,HNRNPM
SE_02_034400225 chr2:111430685-111464687 34002 225 5 573 20 1 160 0 LOC541471
SE_02_034400083 chr2:127063170-127098726 35556 83 6 1116 151 8 58 932 BIN1
SE_02_034400268 chr2:128279345-128295516 16171 268 2 485 34 1 15 0 HS6ST1
SE_02_034400185 chr2:218317862-218342494 24632 185 3 686 84 1 70 698 PNKD,TMBIM1,C2ORF62,AAMP,SLC11A1
SE_02_034400312 chr2:218396138-218405927 9789 312 3 383 19 0 117 1633 SLC11A1,CTDSP1,MIR26B,C2ORF62,VIL1
SE_02_034400122 chr2:230863662-230887012 23350 122 5 760 90 0 122 1088 ITM2C,GPR55
SE_02_034400207 chr2:231602949-231616346 13397 207 2 353 39 0 87 0 C2ORF57
SE_02_034400077 chr2:231661888-231689760 27872 77 6 851 20 4 82 0 PTMA,MIR1244-2
SE_02_034400219 chr2:231705423-231712995 7572 219 2 304 14 1 128 982 PTMA,MIR1244-2
SE_02_034400090 chr2:233077441-233119084 41643 90 12 1404 27 3 52 58 INPP5D,NEU2
SE_02_034400082 chr2:237672988-237707084 34096 82 10 1025 90 2 80 231 LRRFIP1
SE_02_034400200 chr2:25272821-25297685 24864 200 7 632 20 1 91 464 DNMT3A,MIR1301
SE_02_034400239 chr2:28346320-28368920 22600 239 4 681 71 3 54 0 FOSL2
SE_02_034400010 chr2:42920409-42980442 60033 10 15 2204 128 7 242 0 HAAO
SE_02_034400015 chr2:43157227-43228183 70956 15 17 2503 80 2 325 1081 ZFP36L2,LOC100129726
SE_02_034400125 chr2:46945113-46987154 42041 125 8 1336 183 4 68 523 TTC7A,MCFD2
SE_02_034400285 chr2:8534968-8549410 14442 285 4 450 0 2 57 0 ID2
SE_02_034400153 chr2:85405269-85440294 35025 153 6 941 127 1 104 2181 CAPG,SH2D6
SE_02_034400305 chr2:85577328-85591967 14639 305 4 367 48 5 85 528 VAMP8,VAMP5,GGCX,USP39,RNF181,C2ORF68,TMEM150A,MAT2A
SE_02_034400216 chr2:87485547-87520141 34594 216 5 682 29 0 165 0 NCRNA00152
SE_02_034400283 chr20:25041263-25059151 17888 283 3 534 86 1 24 298 ACSS1,C20ORF3,VSX1
SE_02_034400101 chr20:32445383-32477525 32142 101 7 966 52 0 186 1358 C20ORF112
SE_02_034400022 chr20:32508310-32586168 77858 22 15 1901 131 1 547 1080 LOC149950,C20ORF112
SE_02_034400214 chr20:36835038-36865686 30648 214 4 711 53 3 94 645 C20ORF117,C20ORF118
SE_02_034400273 chr20:44640787-44652552 11765 273 3 332 38 0 20 171 ADA,LOC79015
SE_02_034400226 chr20:63831415-63859776 28361 226 5 916 94 2 125 1 ZBTB46,C20ORF135,DNAJC5,TPD52L2
SE_02_034400095 chr21:38980072-39022631 42559 95 13 1434 84 9 53 0 PSMG1
SE_02_034400129 chr21:42098784-42142639 43855 129 5 1776 223 8 55 2297 UMODL1,C21ORF128
SE_02_034400221 chr21:42512340-42535134 22794 221 7 701 87 2 48 545 SLC37A1,RSPH1
SE_02_034400290 chr21:43383558-43403881 20323 290 2 737 1 2 11 0 SIK1,C21ORF125
SE_02_034400209 chr21:43443514-43461933 18419 209 3 678 41 4 3 923 C21ORF125,SIK1,C21ORF84
SE_02_034400019 chr21:44138118-44209865 71747 19 11 2513 216 12 11 413 C21ORF33,ICOSLG,PWP2
SE_02_034400188 chr21:44286198-44308301 22103 188 5 897 109 5 47 2637 AIRE,PFKL,ICOSLG,DNMT3L,C21ORF2,TRPM2
SE_02_034400080 chr21:44881268-44933287 52019 80 8 2091 200 8 66 2934 ITGB2,C21ORF67,PTTG1IP,C21ORF70
SE_02_034400152 chr21:44951617-44994311 42694 152 6 1749 248 3 39 1162 C21ORF70,NCRNA00163,ITGB2,C21ORF67,NCRNA00162
SE_02_034400193 chr21:45532795-45556501 23706 193 6 721 48 3 10 611 SLC19A1
SE_02_034400056 chr22:17768078-17823602 55524 56 7 2004 47 6 131 2925 BID,MICAL3,MIR3198
SE_02_034400161 chr22:19869357-19894027 24670 161 5 914 130 3 113 1081 TXNRD2,COMT,GNB1L,C22ORF29
SE_02_034400118 chr22:20212732-20247453 34721 118 3 1163 83 2 191 622 RTN4R,LOC150197,MIR1286
SE_02_034400170 chr22:21926181-21950383 24202 170 4 742 74 1 57 781 PPM1F,TOP3B
SE_02_034400070 chr22:23208437-23252303 43866 70 12 1438 107 8 66 87 BCR,FBXW4P1
SE_02_034400245 chr22:23565281-23584636 19355 245 4 683 64 1 0 476 IGLL1,C22ORF43
SE_02_034400036 chr22:24134374-24187674 53300 36 7 1545 107 3 231 2621 CABIN1,SUSD2
SE_02_034400275 chr22:24422416-24437549 15133 275 4 436 32 3 61 1158 C22ORF45,ADORA2A
SE_02_034400247 chr22:28798258-28821062 22804 247 4 564 63 1 46 231 XBP1,CCDC117
SE_02_034400295 chr22:29195152-29219566 24414 295 5 639 72 0 82 426 EMID1,EWSR1,RHBDD3
SE_02_034400049 chr22:30262962-30306237 43275 49 7 1138 84 8 306 2484 TBC1D10A,OSM,GATSL3,LIF
SE_02_034400175 chr22:31612769-31639169 26400 175 3 881 100 2 95 2165 SFI1,PISD
SE_02_034400302 chr22:36372076-36388091 16015 302 5 453 43 0 75 137 MYH9
SE_02_034400230 chr22:36449122-36468283 19161 230 7 614 86 2 32 250 TXN2,FOXRED2
SE_02_034400303 chr22:37227663-37242678 15015 303 4 472 51 3 39 419 RAC2,CYTH4,SSTR3,C1QTNF6
SE_02_034400163 chr22:37282273-37314418 32145 163 7 1008 81 3 72 1969 CYTH4,RAC2
SE_02_034400162 chr22:37610484-37641856 31372 162 4 957 86 1 198 3060 GGA1,SH3BP1,PDXP,NOL12,LGALS2,LGALS1
SE_02_034400233 chr22:43244009-43267278 23269 233 6 817 56 5 88 290 SCUBE1,TTLL12
SE_02_034400251 chr22:44048551-44076419 27868 251 5 850 57 4 13 79 PARVB
SE_02_034400313 chr22:46101777-46116230 14453 313 1 616 45 3 49 1554 MIRLET7A3,LOC400931,MIRLET7B,PPARA,C22ORF26,MIR3619,LOC150381
SE_02_034400009 chr22:46560722-46629642 68920 9 12 2516 295 6 67 131 GRAMD4,CELSR1
SE_02_034400037 chr22:46649758-46697069 47311 37 8 1807 192 4 103 2906 GRAMD4,CERK
SE_02_034400166 chr22:46727884-46754375 26491 166 6 939 137 0 64 229 CERK,TBC1D22A
SE_02_034400088 chr22:49824268-49862106 37838 88 6 1097 168 2 67 487 BRD1,ZBED4,LOC90834
SE_02_034400040 chr22:49926894-49970691 43797 40 5 1649 182 5 158 1004 CRELD2,PIM3,ALG12
SE_02_034400064 chr22:50170727-50199067 28340 64 5 989 104 3 157 2229 TRABD,PANX2,TUBGCP6,MOV10L1,SELO
SE_02_034400084 chr22:50292370-50316869 24499 84 6 842 85 0 153 1382 FAM116B,PLXNB2,TUBGCP6,MAPK12,HDAC10,MAPK11,PPP6R2
SE_02_034400235 chr22:50464017-50484099 20082 235 4 798 55 0 148 1876 ADM2,SBF1,ODF3B,SCO2,NCAPH2,LMF2,MIOX,TYMP
SE_02_034400062 chr3:127749442-127805149 55707 62 12 1669 93 10 84 83 MGLL
SE_02_034400258 chr3:128483477-128497876 14399 258 3 382 29 3 218 1040 GATA2,LOC90246,DNAJB8
SE_02_034400024 chr3:129546884-129600409 53525 24 9 1733 176 4 262 4212 H1FOO,PLXND1,RHO
SE_02_034400147 chr3:12992659-13020530 27871 147 5 760 34 5 101 0 IQSEC1
SE_02_034400068 chr3:14403092-14442909 39817 68 6 1249 50 7 172 87 SLC6A6
SE_02_034400169 chr3:195147663-195180998 33335 169 10 1036 108 2 33 453 C3ORF21
SE_02_034400030 chr3:195853774-195910968 57194 30 11 2017 159 3 367 3907 TNK2,MUC4
SE_02_034400249 chr3:196179381-196196466 17085 249 6 562 66 6 31 0 ZDHHC19,LOC401109,OSTALPHA
SE_02_034400103 chr3:196612069-196644651 32582 103 10 989 114 8 40 118 LRRC33,FBXO45,WDR53
SE_02_034400236 chr3:32399380-32432819 33439 236 7 980 147 3 11 0 CMTM7
SE_02_034400317 chr3:46977494-46992710 15216 317 2 376 41 1 108 1052 NBEAL2,CCDC12,NRADDP
SE_02_034400191 chr3:49802537-49814128 11591 191 1 256 16 1 133 1930 UBA7,C3ORF54,TRAIP,IP6K1,CDHR4
SE_02_034400060 chr3:50226832-50261912 35080 60 4 744 46 3 348 2335 GNAI2,GNAT1,HYAL3,SLC38A3,C3ORF45,NAT6,IFRD2,HYAL1,SEMA3B
SE_02_034400045 chr3:50591035-50639269 48234 45 8 1084 87 4 224 1279 CISH,MAPKAPK3,C3ORF18,HEMK1,DOCK3
SE_02_034400318 chr3:53235288-53254182 18894 318 5 586 104 4 42 387 TKT
SE_02_034400051 chr4:2255461-2299065 43604 51 8 1524 75 14 129 1213 MXD4,ZFYVE28,HAUS3,POLN
SE_02_034400073 chr4:2785960-2812734 26774 73 5 918 87 1 69 453 SH3BP2,TNIP2,ADD1
SE_02_034400179 chr4:705774-727430 21656 179 3 767 78 1 13 121 PCGF3,MFSD7,MYL5,ATP5I
SE_02_034400262 chr4:8188070-8206852 18782 262 3 759 43 1 35 260 SH3TC1,ABLIM2
SE_02_034400259 chr5:1100109-1112315 12206 259 2 430 47 1 21 183 SLC12A7
SE_02_034400304 chr5:132414144-132436426 22282 304 8 534 59 9 50 80 C5ORF56,SLC22A5,MIR3936
SE_02_034400274 chr5:132483295-132499158 15863 274 3 408 66 4 135 977 IRF1,IL5
SE_02_034400075 chr5:134523914-134573550 49636 75 7 1306 129 15 448 1308 PHF15
SE_02_034400294 chr5:139386807-139396435 9628 294 1 235 7 0 120 1417 MZB1,LOC389333,SPATA24,DNAJC18,PAIP2,SLC23A1
SE_02_034400005 chr5:139637417-139712834 75417 5 12 1748 109 7 1036 572 CXXC5
SE_02_034400168 chr5:172751261-172775928 24667 168 5 732 41 2 149 574 DUSP1
SE_02_034400205 chr5:172833915-172859734 25819 205 5 800 55 8 76 169 ERGIC1
SE_02_034400276 chr5:176530960-176544342 13382 276 3 391 19 1 68 899 CDHR2,RNF44
SE_02_034400212 chr5:177493559-177515184 21625 212 4 723 37 0 148 2291 PDLIM7,DDX41,DOK3,PRR7,DBN1,FAM193B
SE_02_034400280 chr6:34223057-34247138 24081 280 4 772 37 5 180 1309 HMGA1,C6ORF1
SE_02_034400257 chr7:100351343-100375356 24013 257 5 703 63 1 0 1847 PILRB,PILRA,SPDYE3,PMS2P1
SE_02_034400224 chr7:100429293-100451190 21897 224 5 527 38 2 166 1282 MEPCE,C7ORF47,TSC22D4,C7ORF61,C7ORF51,ZCWPW1
SE_02_034400198 chr7:100673239-100694221 20982 198 5 734 53 6 383 3378 GNB2,GIGYF1,ZAN,ACTL6B,TFR2,EPO,POP7
SE_02_034400202 chr7:101717392-101744858 27466 202 5 798 22 1 51 0 CUX1
SE_02_034400228 chr7:102422180-102435549 13369 228 6 388 39 0 34 900 PRKRIP1,ORAI2,ALKBH4,LRWD1,POLR2J
SE_02_034400028 chr7:1456707-1516184 59477 28 9 2774 232 1 270 5637 INTS1,MICALL2,TMEM184A,MAFK
SE_02_034400106 chr7:1529206-1561640 32434 106 3 1339 97 1 125 4350 TMEM184A,MAFK,INTS1,PSMG3,KIAA1908
SE_02_034400265 chr7:1999276-2033339 34063 265 6 1282 98 2 45 235 MAD1L1
SE_02_034400042 chr7:2498204-2540296 42092 42 7 1530 89 2 291 2285 LFNG,C7ORF27,IQCE
SE_02_034400156 chr7:2631935-2650547 18612 156 5 669 40 0 97 817 TTYH3,AMZ1
SE_02_034400115 chr7:2716106-2740584 24478 115 8 1141 130 4 41 596 GNA12,AMZ1
SE_02_034400320 chr7:44961582-44982070 20488 320 3 584 49 0 137 2768 MYO1G,CCM2,C7ORF40,SNORA9
SE_02_034400279 chr7:47567829-47582661 14832 279 4 413 15 0 67 143 TNS3
SE_02_034400002 chr7:5349436-5492867 143431 2 26 5351 193 13 548 5592 FBXL18,TNRC18,MIR589,ACTB
SE_02_034400197 chr7:589518-609296 19778 197 3 779 77 0 42 355 PRKAR1B,FLJ44511
SE_02_034400172 chr7:74210812-74228282 17470 172 3 510 32 0 15 1097 LAT2,EIF4H,RFC2,MIR590
SE_02_034400250 chr8:102788513-102810958 22445 250 5 561 47 0 91 670 AZIN1
SE_02_034400057 chr8:133485923-133539718 53795 57 8 1711 74 13 17 62 ST3GAL1
SE_02_034400319 chr8:133557160-133573410 16250 319 2 433 15 2 47 168 ST3GAL1
SE_02_034400284 chr8:141398657-141419590 20933 284 4 691 48 0 72 0 GPR20,PTP4A3
SE_02_034400141 chr8:143936666-143952055 15389 141 3 528 39 1 189 1444 PLEC,MIR661,GRINA,PARP10
SE_02_034400277 chr8:27361219-27390487 29268 277 4 850 57 7 69 0 PTK2B,TRIM35
SE_02_034400076 chr9:114367161-114404315 37154 76 10 1049 80 1 178 1803 AKNA,DFNB31,ORM2,ORM1
SE_02_034400044 chr9:124271306-124310783 39477 44 9 1215 88 4 172 397 NEK6,LOC100129034
SE_02_034400120 chr9:127852900-127887039 34139 120 5 969 71 2 0 1810 ENG,AK1,ST6GALNAC6,FPGS,PIP5KL1,ST6GALNAC4
SE_02_034400234 chr9:129398170-129416507 18337 234 4 604 19 3 78 0 C9ORF106
SE_02_034400061 chr9:129458081-129497374 39293 61 8 1165 75 0 122 419 C9ORF50
SE_02_034400242 chr9:129866318-129890504 24186 242 5 863 140 1 113 2396 USP20,FNBP1,C9ORF78,TOR1A
SE_02_034400032 chr9:131236839-131279273 42434 32 10 1315 42 0 175 1222 FAM78A,PPAPDC3
SE_02_034400011 chr9:133102202-133152531 50329 11 9 1671 98 1 221 2173 RALGDS,CEL,CELP,GBGT1
SE_02_034400016 chr9:134335363-134425498 90135 16 14 3319 111 9 238 3059 RXRA
SE_02_034400324 chr9:136324076-136333007 8931 324 1 330 33 0 48 1047 LOC26102,GPSM1,DNLZ,CARD9
SE_02_034400039 chr9:136514718-136555791 41073 39 10 1466 83 0 288 2345 NOTCH1,C9ORF163,SEC16A
SE_02_034400066 chr9:136643526-136665716 22190 66 4 784 44 3 33 1030 EGFL7,MIR126,FAM69B,AGPAT2
SE_02_034400034 chr9:136683201-136724087 40886 34 5 1476 137 1 87 1317 FAM69B,AGPAT2,EGFL7,SNORA43,LCN10,SNORA17,LOC100128593,LCN6,LCN8,SNHG7,MIR126,LCN15
SE_02_034400292 chr9:137302396-137322238 19842 292 2 620 29 1 122 421 EXD3,COBRA1,C9ORF167,NRARP
SE_02_034400243 chr9:89422185-89447734 25549 243 5 864 58 3 28 0 SEMA4D
SE_02_034400086 chr9:92716855-92765576 48721 86 6 1381 140 4 180 942 BICD2,ANKRD19,IPPK
SE_02_034400038 chr9:93093510-93144763 51253 38 10 1608 175 6 148 1437 NINJ1,C9ORF89,SUSD3,WNK2
SE_02_034400094 chrX:1450831-1504464 53633 94 10 1961 9 0 0 1161 ASMTL,P2RY8
SE_02_034400322 chrX:40083219-40110046 26827 322 6 416 1 0 670 173 BCOR
SE_02_034400194 chrX:40145028-40176969 31941 194 9 570 0 0 492 35 BCOR

SE annotation visualization


Information description of sample and annotation

Case ID: Name:GSM2152595
Input ID: Name:GSM2152598
Common SNP: dbSNP
eQTL: GTEx, HaploReg v4.1, PancanQTL
Risk SNP : GWAS Catalog, GWASdb v2.0
TFBS: TFBS Conserved of UCSC
CRISPR/Cas9 target site: CRISPR Targets of UCSC

Software and parameters used

Read Mapping: bowtie(v2.4.4) -p 10 -x -S -U
Peak Calling: macs2 callpeak -t -c -f BAM -B -g hs(mm) -q 0.01 --keep-dup=auto
Stitching Distance: 12.5 kb
TSS Exclusive Zone: +/- 2 kb