SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000183386
Gene: FHL3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:37996770-38005606 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_031700739 chr1:37924321-37970089 Sample_02_0317 Neuroblastoma GICAN 739 5 1249 138 0 128 1521 INPP5B,SF3A3,FHL3,UTP11L
SE_02_158300963 chr1:37943660-37970918 Sample_02_1583 Fetal lung IMR90_empty_GM 963 8 730 102 0 81 781 INPP5B,SF3A3,UTP11L,FHL3
SE_01_009400254 chr1:38005670-38030653 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 254 1 661 23 1 206 525 UTP11L,SF3A3,POU3F1,FHL3
SE_02_122901051 chr1:38005743-38012550 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 1051 1 176 11 0 29 2 SF3A3,POU3F1,UTP11L,FHL3
SE_02_148100023 chr1:38014486-38077086 Sample_02_1481 Bone MIC 23 17 1524 64 2 664 1189 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_147800103 chr1:38014785-38074430 Sample_02_1478 Bone EW-3 103 19 1447 60 2 632 1189 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_147900252 chr1:38015015-38072024 Sample_02_1479 Bone EW-7 252 21 1389 57 2 632 1189 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_018400165 chr1:38015622-38046725 Sample_02_0184 Skin SKMEL30 165 6 735 24 1 495 1103 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_018500245 chr1:38015730-38046210 Sample_02_0185 Skin UACC257 245 5 727 24 1 442 941 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_149300836 chr1:38015935-38037852 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 836 5 532 17 1 250 430 UTP11L,SF3A3,POU3F1,FHL3
SE_02_147400018 chr1:38015963-38075588 Sample_02_1474 Bone CHLA-10 18 14 1438 61 2 635 1189 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_048000865 chr1:38016022-38031097 Sample_02_0480 Gingival epithelial HGEP 865 4 385 10 1 169 430 UTP11L,SF3A3,POU3F1,FHL3
SE_02_148000680 chr1:38019849-38031111 Sample_02_1480 Bone MHH-ES-1 680 1 288 7 0 138 218 UTP11L,SF3A3,POU3F1,FHL3
SE_02_148500396 chr1:38021456-38031724 Sample_02_1485 Bone SK-ES-1 396 1 266 5 0 125 218 UTP11L,SF3A3,POU3F1,FHL3
SE_02_105900663 chr1:38021488-38032558 Sample_02_1059 Bone A673_WT 663 1 283 7 0 125 218 UTP11L,SF3A3,POU3F1,FHL3
SE_02_147300664 chr1:38021488-38032558 Sample_02_1473 Bone A-673 664 1 283 7 0 125 218 UTP11L,SF3A3,POU3F1,FHL3
SE_02_128001069 chr1:38022347-38031949 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 1069 1 248 5 0 125 218 UTP11L,SF3A3,POU3F1,FHL3
SE_01_005400128 chr1:38022579-38064555 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 128 5 1003 40 1 553 966 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_070100054 chr1:38023312-38074152 Sample_02_0701 Bone David_TC32 54 27 1224 52 1 547 933 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_010500632 chr1:38024557-38031358 Sample_02_0105 Skin neonatal_keratinocytes 632 1 185 3 0 92 48 UTP11L,FHL3,SF3A3,POU3F1
SE_02_143201695 chr1:38024568-38032169 Sample_02_1432 Bone A673 STAG2 WT 1695 1 196 3 0 105 47 UTP11L,SF3A3,POU3F1,FHL3
SE_02_006300184 chr1:38024573-38074932 Sample_02_0063 Skin Keratinocytes 184 7 1212 51 1 548 806 UTP11L,POU3F1,MIR3659,SF3A3,FHL3
SE_02_064900730 chr1:38024644-38031027 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 730 5 171 2 0 80 37 UTP11L,SF3A3,POU3F1,FHL3
SE_02_064800751 chr1:38024680-38031222 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 751 1 175 2 0 92 27 UTP11L,SF3A3,POU3F1,FHL3
SE_02_039601954 chr1:38024764-38031987 Sample_02_0396 Skin NHEK-D 1954 1 186 1 0 105 18 UTP11L,FHL3,SF3A3,POU3F1
SE_02_112100536 chr1:38024856-38031168 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 536 6 166 1 0 90 17 SF3A3,POU3F1,UTP11L,FHL3
SE_02_148700041 chr1:38024959-38068304 Sample_02_1487 Bone TC-32 41 17 1042 41 1 535 764 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_021600193 chr1:38024993-38071553 Sample_02_0216 Skin NHEK_scramble 193 13 1123 46 1 543 761 POU3F1,MIR3659,SF3A3,FHL3,UTP11L
SE_02_148900268 chr1:38025007-38044785 Sample_02_1489 Bone TC-106 268 8 490 15 0 275 194 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_01_008800797 chr1:38026105-38046130 Sample_01_0088 Tibial nerve tibial-nerve 797 1 471 14 0 344 495 POU3F1,MIR3659,SF3A3,FHL3,UTP11L
SE_02_124800607 chr1:38026213-38032130 Sample_02_1248 Bladder RT4 607 1 150 0 0 102 0 SF3A3,POU3F1,UTP11L,FHL3
SE_02_001900582 chr1:38026897-38095213 Sample_02_0019 Embryo Neural crest cells 582 13 1707 65 2 694 808 POU3F1,MIR3659,SF3A3,FHL3,UTP11L
SE_02_104601553 chr1:38027043-38071209 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1553 18 1058 45 1 533 759 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_096200370 chr1:38027063-38068715 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 370 8 996 41 1 533 759 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_138400670 chr1:38027236-38050955 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 670 6 525 20 0 456 759 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_097000398 chr1:38027412-38073727 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 398 14 1100 48 1 535 759 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_068100231 chr1:38029734-38046710 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 231 5 370 14 0 344 664 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_028400396 chr1:38036755-38054235 Sample_02_0284 Pelvis patient 119 396 1 383 21 0 330 759 POU3F1,MIR3659,SF3A3,FHL3,UTP11L
SE_02_148500810 chr1:38037694-38046058 Sample_02_1485 Bone SK-ES-1 810 1 190 8 0 165 479 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_128001348 chr1:38038156-38046712 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 1348 1 189 7 0 240 665 POU3F1,MIR3659,SF3A3,UTP11L,FHL3
SE_02_143201579 chr1:38042033-38048185 Sample_02_1432 Bone A673 STAG2 WT 1579 1 104 2 0 209 759 POU3F1,MIR3659,UTP11L,FHL3
SE_02_143301700 chr1:38043061-38048073 Sample_02_1433 Bone A673 STAG2 null 1700 1 81 2 0 209 759 POU3F1,MIR3659,UTP11L,FHL3
SE_02_106000745 chr1:38047405-38054226 Sample_02_1060 Bone TC71_SA2 KO 745 1 151 12 0 38 0 MIR3659,POU3F1,UTP11L,FHL3
Genomic distribution of SEs associated with FHL3
Genome Browser

The strength of the tissue affected by the gene

Expression of FHL3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)