SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000205436
Gene: EXOC3L4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr14:103100144-103110559 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_143200598 chr14:102969257-103094803 Sample_02_1432 Bone A673 STAG2 WT 598 45 3981 225 8 163 1015 CDC42BPB,TNFAIP2,AMN,EXOC3L4
SE_02_158300520 chr14:102987834-103055174 Sample_02_1583 Fetal lung IMR90_empty_GM 520 21 2151 109 4 24 246 CDC42BPB,EXOC3L4
SE_02_076800106 chr14:102992977-103076229 Sample_02_0768 Ovary SKOV3 106 43 2580 128 5 66 464 CDC42BPB,EXOC3L4
SE_02_148100226 chr14:103001032-103079790 Sample_02_1481 Bone MIC 226 21 2421 115 3 65 389 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_107500127 chr14:103008136-103055843 Sample_02_1075 Lymphoma BC-3 127 18 1507 67 2 19 100 CDC42BPB,EXOC3L4
SE_02_071900084 chr14:103009597-103075735 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 84 19 2009 89 3 56 253 CDC42BPB,EXOC3L4
SE_02_098900648 chr14:103014682-103076441 Sample_02_0989 Kidney kidney cortex_WT 648 19 1880 81 3 52 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_082600752 chr14:103015116-103076271 Sample_02_0826 Stomach gastric tumor 752 22 1856 80 3 52 218 CDC42BPB,EXOC3L4
SE_02_071600243 chr14:103046462-103076209 Sample_02_0716 Pancreas SUIT2_GFP 243 11 894 39 1 51 218 CDC42BPB,EXOC3L4
SE_02_143301814 chr14:103046724-103094578 Sample_02_1433 Bone A673 STAG2 null 1814 20 1482 91 1 105 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_078000039 chr14:103048137-103076806 Sample_02_0780 Liver SMMC-7721 39 13 857 38 1 51 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_050500538 chr14:103049183-103076426 Sample_02_0505 Esophagus KYSE70_1 538 10 827 37 1 51 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_051600538 chr14:103049183-103076456 Sample_02_0516 Esophagus KYSE70 538 8 828 37 1 51 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_047900945 chr14:103050484-103076178 Sample_02_0479 Head and neck SCC25 945 13 777 36 1 50 218 CDC42BPB,EXOC3L4
SE_02_051700796 chr14:103050489-103076326 Sample_02_0517 Esophagus TE5 796 10 780 36 1 50 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_125800206 chr14:103053507-103077881 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 206 5 723 35 1 44 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_088600276 chr14:103054525-103088257 Sample_02_0886 Skin foreskin_ p63KLF4 276 8 968 63 1 82 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_076000773 chr14:103054561-103076402 Sample_02_0760 Ovary BIN-67_SMARCA4 773 8 603 29 1 44 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_070500619 chr14:103054608-103076203 Sample_02_0705 Pancreas AsPC1 WT 619 6 592 28 1 44 218 CDC42BPB,EXOC3L4
SE_04_000900206 chr14:103054755-103076330 Sample_04_0009 Lung A549 206 3 591 28 1 44 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_071700513 chr14:103054756-103076186 Sample_02_0717 Pancreas HPAFII_GFP_DOX 513 7 588 28 1 44 218 CDC42BPB,EXOC3L4
SE_01_010700685 chr14:103054777-103076181 Sample_01_0107 Esophagus esophagus squamous epithelium 685 5 587 28 1 44 218 CDC42BPB,EXOC3L4
SE_02_136700504 chr14:103054782-103076357 Sample_02_1367 Pancreas Capan1-untreated 504 7 591 28 1 44 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_137100935 chr14:103054811-103076234 Sample_02_1371 Pancreas Patu899S-untreated 935 8 587 28 1 44 218 CDC42BPB,EXOC3L4
SE_02_053001086 chr14:103054833-103075650 Sample_02_0530 Mammary gland MCF10A 1086 6 579 25 1 44 218 CDC42BPB,EXOC3L4
SE_02_095001357 chr14:103054845-103076211 Sample_02_0950 Umbilical vein HUVEC_WT 1357 9 587 28 1 42 218 CDC42BPB,EXOC3L4
SE_02_080800574 chr14:103054862-103076211 Sample_02_0808 Ovary RMG1_ARID1A KO 574 12 587 28 1 42 218 CDC42BPB,EXOC3L4
SE_02_136500239 chr14:103054868-103076403 Sample_02_1365 Pancreas AsPC1-untreated 239 4 593 28 1 42 218 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_105700497 chr14:103054914-103076089 Sample_02_1057 Esophagus GihTRT 497 3 585 28 1 42 218 CDC42BPB,EXOC3L4
SE_02_071400306 chr14:103054942-103075676 Sample_02_0714 Pancreas SUIT2_MTV 306 4 578 25 1 42 218 CDC42BPB,EXOC3L4
SE_02_152000714 chr14:103055130-103068437 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 714 5 352 9 0 36 218 CDC42BPB,EXOC3L4
SE_02_131900319 chr14:103055174-103076245 Sample_02_1319 Connective Tissue HT1080_DDIT3 319 4 581 28 1 42 218 CDC42BPB,EXOC3L4
SE_02_105600471 chr14:103055181-103075829 Sample_02_1056 Esophagus ChTRT 471 3 574 25 1 42 218 CDC42BPB,EXOC3L4
SE_02_070600269 chr14:103055326-103075680 Sample_02_0706 Pancreas SUIT2 WT 269 7 570 25 1 42 218 CDC42BPB,EXOC3L4
SE_02_070400157 chr14:103055390-103075713 Sample_02_0704 Pancreas HPAFII WT 157 10 567 25 1 42 218 CDC42BPB,EXOC3L4
SE_02_076601004 chr14:103057866-103076286 Sample_02_0766 Ovary PEO1 1004 8 523 28 1 17 0 CDC42BPB,EXOC3L4
SE_02_088400806 chr14:103064736-103076859 Sample_02_0884 Colon LoVo 806 2 348 24 1 16 0 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_105400241 chr14:103066182-103076238 Sample_02_1054 Esophagus SKGT4 241 3 289 22 1 10 0 CDC42BPB,EXOC3L4
SE_04_000600244 chr14:103066489-103075746 Sample_04_0006 Lung A549 GFP control 244 2 273 19 1 8 0 CDC42BPB,EXOC3L4
SE_02_152300535 chr14:103066632-103075709 Sample_02_1523 Lung A549 DMSO 535 3 267 19 1 7 0 CDC42BPB,EXOC3L4
SE_02_056200174 chr14:103066632-103076387 Sample_02_0562 Lung A549_Dex-treated 174 6 279 22 1 7 0 CDC42BPB,TNFAIP2,EXOC3L4
SE_04_001000433 chr14:103066858-103076443 Sample_04_0010 Lung A549 TGFb 433 2 273 22 1 6 0 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_072500429 chr14:103066885-103073706 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 429 5 197 12 1 3 0 CDC42BPB,EXOC3L4
SE_02_154100615 chr14:103066945-103076013 Sample_02_1541 Nasopharyngeal HNE1 615 4 260 20 1 6 0 CDC42BPB,EXOC3L4
SE_02_050700288 chr14:103066967-103075656 Sample_02_0507 Esophagus TE7_1 288 7 254 18 1 6 0 CDC42BPB,EXOC3L4
SE_02_158000486 chr14:103067059-103076244 Sample_02_1580 Renal 786-O 486 3 261 21 1 6 0 CDC42BPB,EXOC3L4
SE_04_000300233 chr14:103067466-103075669 Sample_04_0003 Lung A549 TEAD4 shRNA TGFb 233 2 242 18 1 6 0 CDC42BPB,EXOC3L4
SE_02_103602193 chr14:103091135-103092046 Sample_02_1036 Mammary gland HCC70_XY018 2193 1 25 3 0 3 0 CDC42BPB,TNFAIP2,EXOC3L4
SE_02_063900194 chr14:103110627-103124690 Sample_02_0639 Blood T-ALL PDX 194 7 411 29 1 33 158 TNFAIP2,EXOC3L4
SE_02_083300693 chr14:103111042-103124902 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 693 4 399 29 1 33 132 TNFAIP2,EXOC3L4
SE_02_130500276 chr14:103111060-103129927 Sample_02_1305 Pancreas Gemcitabine resistant L3.6pl 276 4 533 32 1 80 627 TNFAIP2,EXOC3L4
SE_02_051500133 chr14:103111298-103138170 Sample_02_0515 Esophagus KYSE140 133 9 821 61 1 116 1789 TNFAIP2,EXOC3L4
SE_02_050300133 chr14:103111298-103138171 Sample_02_0503 Esophagus KYSE140_1 133 9 821 61 1 116 1789 TNFAIP2,EXOC3L4
SE_02_072500236 chr14:103112256-103137115 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 236 11 754 48 1 114 1691 TNFAIP2,EXOC3L4
SE_02_156000601 chr14:103113941-103140019 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 601 8 796 61 1 116 1789 TNFAIP2,LINC00605,EXOC3L4
SE_02_067400749 chr14:103114614-103141311 Sample_02_0674 Endometrium E1_FA 749 11 802 67 1 116 1789 TNFAIP2,LINC00605,EXOC3L4
SE_02_112500391 chr14:103118294-103131037 Sample_02_1125 Adipose visceral adipose_CS_VC06 391 7 371 22 0 79 834 TNFAIP2,EXOC3L4
SE_02_081800765 chr14:103121059-103132814 Sample_02_0818 Ovary High-grade serous ovarian cancer 765 1 351 22 0 86 1073 TNFAIP2,EXOC3L4
SE_02_114400095 chr14:103121141-103139212 Sample_02_1144 Peripheral nerve S462_PRC2 mutant 95 3 580 47 0 106 1789 TNFAIP2,LINC00605,EXOC3L4
SE_02_124400140 chr14:103121147-103133891 Sample_02_1244 Brain KCNR_ATRA 140 6 403 25 0 94 1238 TNFAIP2,EXOC3L4
SE_02_103500252 chr14:103122338-103128348 Sample_02_1035 Mammary gland HCC70_Vehicle 252 1 168 8 0 46 536 TNFAIP2,EXOC3L4
SE_02_103600617 chr14:103122568-103125169 Sample_02_1036 Mammary gland HCC70_XY018 617 1 88 6 0 8 132 TNFAIP2,EXOC3L4
SE_02_094500424 chr14:103123413-103144634 Sample_02_0945 Brain SF767 424 6 673 71 0 88 1729 TNFAIP2,LINC00605,EXOC3L4
SE_02_136200536 chr14:103123471-103209847 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 536 25 2770 368 5 120 2092 LINC00605,TNFAIP2,EXOC3L4
SE_02_136100498 chr14:103123490-103209781 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 498 19 2768 366 5 119 2091 LINC00605,TNFAIP2,EXOC3L4
SE_02_103600787 chr14:103126344-103128590 Sample_02_1036 Mammary gland HCC70_XY018 787 1 46 1 0 33 358 TNFAIP2,EXOC3L4
SE_02_157800196 chr14:103126494-103198740 Sample_02_1578 Mammary gland MCF7_DAC+455 196 17 2335 311 3 83 1954 LINC00605,TNFAIP2,EXOC3L4,CDC42BPB
SE_02_154000396 chr14:103127335-103132594 Sample_02_1540 Nasopharyngeal HK1 396 1 165 11 0 41 600 TNFAIP2,EXOC3L4
SE_02_157700230 chr14:103127906-103173846 Sample_02_1577 Mammary gland MCF7_DAC 230 14 1531 206 2 51 1253 TNFAIP2,LINC00605,EXOC3L4,CDC42BPB
Genomic distribution of SEs associated with EXOC3L4
Genome Browser

The strength of the tissue affected by the gene

Expression of EXOC3L4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)