SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000137976
Gene: DNASE2B Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:84398532-84415018 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_011400192 chr1:84338282-84388009 Sample_01_0114 Colon HCT116_encode 192 17 1205 59 4 113 544 SAMD13,UOX,DNASE2B
SE_02_042600217 chr1:84338532-84368784 Sample_02_0426 Colon HCT116_NONT 217 4 743 30 2 45 360 UOX,SAMD13,DNASE2B
SE_02_042700283 chr1:84338595-84368916 Sample_02_0427 Colon HCT116_shPAF1 283 3 745 30 2 45 360 UOX,SAMD13,DNASE2B
SE_02_150600145 chr1:84339776-84382424 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 145 15 1030 43 3 89 508 SAMD13,UOX,DNASE2B
SE_02_049901589 chr1:84344021-84382113 Sample_02_0499 Fetal lung IMR90 IR Senescence 1589 20 918 34 3 89 493 SAMD13,UOX,DNASE2B
SE_02_150500123 chr1:84345372-84380681 Sample_02_1505 Brain SHEP with tetracycline inducible MYC_DOX_2HR 123 13 855 32 3 76 361 SAMD13,UOX,DNASE2B
SE_02_024400154 chr1:84345834-84381700 Sample_02_0244 Foreskin foreskin_D11 154 10 866 33 3 79 354 UOX,SAMD13,DNASE2B
SE_02_150400108 chr1:84345954-84382744 Sample_02_1504 Brain SHEP with tetracycline inducible MYCN_0HR 108 12 887 36 3 82 397 SAMD13,UOX,DNASE2B
SE_02_141900208 chr1:84346608-84378699 Sample_02_1419 Brain hNSC 208 6 787 26 3 73 354 SAMD13,UOX,DNASE2B
SE_02_118501022 chr1:84347188-84379667 Sample_02_1185 Brain GBM14 1022 13 790 27 3 73 354 SAMD13,UOX,DNASE2B
SE_02_085800940 chr1:84347244-84380644 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 940 6 807 29 3 74 354 SAMD13,UOX,DNASE2B
SE_02_118700824 chr1:84347398-84387691 Sample_02_1187 Brain GBM16 824 20 977 46 4 104 433 SAMD13,UOX,DNASE2B
SE_02_095400268 chr1:84349680-84380202 Sample_02_0954 Brain H3.3K27WT_2192 268 6 753 27 3 65 332 SAMD13,UOX,DNASE2B
SE_02_118600802 chr1:84350779-84378152 Sample_02_1186 Brain GBM15 802 10 686 19 3 59 247 SAMD13,UOX,DNASE2B
SE_02_086500447 chr1:84351660-84380042 Sample_02_0865 Malignant rhaboid tumor TTC1240_SMARCB1_R377H 447 8 707 22 2 60 231 UOX,SAMD13,DNASE2B
SE_02_086400430 chr1:84351758-84380133 Sample_02_0864 Malignant rhaboid tumor TTC1240_SMARCB1_K364del 430 6 706 22 2 61 231 UOX,SAMD13,DNASE2B
SE_02_117400967 chr1:84351796-84378975 Sample_02_1174 Brain GBM02 967 11 679 17 2 60 231 UOX,SAMD13,DNASE2B
SE_02_141001544 chr1:84351876-84379659 Sample_02_1410 Brain GSC6 1544 8 690 20 2 59 231 UOX,SAMD13,DNASE2B
SE_02_080100468 chr1:84351986-84378224 Sample_02_0801 Brain 2235 468 4 654 17 2 58 231 UOX,SAMD13,DNASE2B
SE_02_096700930 chr1:84352082-84380851 Sample_02_0967 Brain H3.3K27M_JN57 930 8 705 22 2 60 231 UOX,SAMD13,DNASE2B
SE_02_095600578 chr1:84352121-84378366 Sample_02_0956 Brain IDH1_2658 578 9 656 17 2 58 231 UOX,SAMD13,DNASE2B
SE_02_121000569 chr1:84352261-84378356 Sample_02_1210 Brain GBM17 569 8 650 16 2 58 231 UOX,SAMD13,DNASE2B
SE_02_057201110 chr1:84362406-84371168 Sample_02_0572 Brain LN229_1_mM_glucose 1110 6 218 8 1 17 171 UOX,DNASE2B
SE_02_062200688 chr1:84422369-84443289 Sample_02_0622 Blood EOL1_Naive 688 15 524 71 8 46 0 RPF1,UOX,DNASE2B
SE_02_048800553 chr1:84433391-84437910 Sample_02_0488 Bone marrow HSCe_74y_CD34+,CD38-,Lineage- 553 2 122 14 1 15 0 RPF1,UOX,DNASE2B
Genomic distribution of SEs associated with DNASE2B
Genome Browser

The strength of the tissue affected by the gene

Expression of DNASE2B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)