Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000198824
Gene: CHAMP1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr13:114314482-114337626 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087501040 chr13:114203463-114266236 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 1040 20 1896 283 2 55 773 CDC16,MIR548AR,CHAMP1,MIR4502,UPF3A
SE_02_122200097 chr13:114257354-114283311 Sample_02_1222 Bone marrow KMS12 97 7 788 136 1 39 520 CDC16,MIR4502,UPF3A,MIR548AR,CHAMP1
SE_02_111200426 chr13:114260836-114299725 Sample_02_1112 T lymphocyte THP-6 T-ALL 426 11 1308 207 0 48 711 CDC16,MIR4502,UPF3A,MIR548AR,CHAMP1,LINC01054
SE_02_127901471 chr13:114262943-114293920 Sample_02_1279 Bone Mesenchymal stem cells 1471 7 994 167 0 45 599 CDC16,MIR4502,UPF3A,MIR548AR,CHAMP1,LINC01054
SE_02_075201155 chr13:114276699-114283285 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1155 1 210 49 0 13 294 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_075501152 chr13:114276830-114283254 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1152 2 208 49 0 13 292 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_122100486 chr13:114277416-114283230 Sample_02_1221 Bone marrow KMS11 486 3 189 44 0 13 287 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_054501108 chr13:114278684-114283381 Sample_02_0545 Bone marrow K562 WT 1108 1 157 36 0 13 306 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_074500526 chr13:114278719-114284261 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 526 2 186 40 0 14 347 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
SE_02_133200417 chr13:114279173-114296360 Sample_02_1332 Blood Monomac6_CTRL 417 5 642 88 0 25 469 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
SE_02_057500485 chr13:114279188-114283163 Sample_02_0575 Blood MOLM13_sgLKB1e2 485 1 139 30 0 13 279 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_057800502 chr13:114279243-114283150 Sample_02_0578 Blood MOLM-13_sgSIK3e4 502 1 137 30 0 13 274 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_057400549 chr13:114279270-114283306 Sample_02_0574 Blood MOLM-13_sgNeg2 549 1 138 31 0 13 303 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_101701381 chr13:114279285-114297929 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1381 5 693 97 0 25 469 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
SE_02_057700591 chr13:114279308-114283250 Sample_02_0577 Blood MOLM13_empty 591 1 136 31 0 13 292 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_058200630 chr13:114279373-114283294 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 630 1 135 31 0 13 299 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_058100612 chr13:114279482-114283239 Sample_02_0581 Blood MOLM13_empty_HG 612 1 131 31 0 13 289 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_102800394 chr13:114279504-114282855 Sample_02_1028 Blood HL-60_WT 394 1 122 30 0 12 251 UPF3A,MIR548AR,CHAMP1,CDC16,MIR4502
SE_02_126500995 chr13:114279904-114288619 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 995 3 294 42 0 18 425 UPF3A,MIR4502,CDC16,MIR548AR,CHAMP1,LINC01054
SE_02_077502267 chr13:114353327-114354444 Sample_02_0775 Pancreas EndoC-BH1_SE 2267 2 0 1 0 0 0 LINC01054,CHAMP1
SE_02_058800770 chr13:114354067-114354383 Sample_02_0588 Cervix HeLa Kyoto_untreated 770 1 0 0 0 0 0 LINC01054,CHAMP1

Genomic distribution of SEs associated with CHAMP1

The strength of the tissue affected by the gene


Expression of CHAMP1