SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000175161
Gene: CADM2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr3:84958989-86074429 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_141300013 chr3:84957769-85006416 Sample_02_1413 Muscle RH4_sgBRG1 13 6 1177 67 4 332 262 CADM2
SE_02_108300217 chr3:84957865-85006359 Sample_02_1083 Macula macula 217 12 1171 67 4 331 262 CADM2
SE_02_108200898 chr3:84958195-84988223 Sample_02_1082 Retina retina 898 9 707 39 2 252 262 CADM2
SE_02_117600066 chr3:84958306-84981702 Sample_02_1176 Brain GBM04 66 5 548 28 2 208 262 CADM2
SE_02_118900260 chr3:84958922-84980869 Sample_02_1189 Brain GBM22 260 10 520 27 2 176 219 CADM2
SE_02_110400522 chr3:84959014-85006612 Sample_02_1104 Brain NB-69 522 14 1141 67 4 300 203 CADM2
SE_02_097900667 chr3:84959016-84988260 Sample_02_0979 Brain JN14-BS1_H3.3K27M 667 12 682 39 2 218 203 CADM2
SE_02_149900174 chr3:84959052-85006696 Sample_02_1499 Brain BE_2_-C 174 22 1142 67 4 300 194 CADM2
SE_02_082500351 chr3:84959059-85087116 Sample_02_0825 Stomach SNU484 351 52 3255 151 13 564 192 CADM2
SE_02_095600184 chr3:84960529-85008122 Sample_02_0956 Brain IDH1_2658 184 18 1160 70 4 267 0 CADM2
SE_01_011100629 chr3:84961699-85007756 Sample_01_0111 Brain SK-N-SH 629 18 1111 66 4 244 0 CADM2
SE_02_082500155 chr3:85419694-85514171 Sample_02_0825 Stomach SNU484 155 29 2509 234 21 254 142 CADM2,MIR5688
Genomic distribution of SEs associated with CADM2
Genome Browser

The strength of the tissue affected by the gene

Expression of CADM2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)