SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000159314
Gene: ARHGAP27 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:45393902-45434421 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_008100024 chr17:45263188-45385950 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 24 24 3098 213 9 405 2288 LOC100133991,MAP3K14,ARHGAP27,C17ORF46,SH3D20,FMNL1
SE_01_005700115 chr17:45277212-45387472 Sample_01_0057 Pancreas duct PANC-1 115 13 2777 192 6 326 753 MAP3K14,ARHGAP27,LOC100133991,C17ORF46,SH3D20
SE_02_000900430 chr17:45364069-45385554 Sample_02_0009 Kidney 786-O_wtVHL 430 11 585 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_043300380 chr17:45364232-45385856 Sample_02_0433 Lung NCI-H1299_EGFP-NEO_reporter_cells_DAC 380 5 584 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_030101331 chr17:45364246-45386027 Sample_02_0301 Neuroblastoma GIMEN 1331 3 586 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_003601386 chr17:45364264-45376932 Sample_02_0036 Embryo H7 1386 3 322 20 0 16 0 ARHGAP27,MAP3K14
SE_02_040900431 chr17:45364300-45385689 Sample_02_0409 Kidney G401_NoDox 431 5 579 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_025900393 chr17:45364310-45386002 Sample_02_0259 Lung NCI-H1299_EGFP-NEO_reporter_cells_SAHA 393 5 583 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_039700504 chr17:45364340-45385678 Sample_02_0397 Mammary gland CAL51-MCF-7 504 5 577 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_040800659 chr17:45364540-45385703 Sample_02_0408 Kidney G401_Dox 659 6 571 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_03_000900623 chr17:45365513-45386525 Sample_03_0009 Lung A549_dexamethasone_3h 623 2 562 48 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_031700879 chr17:45365595-45384835 Sample_02_0317 Neuroblastoma GICAN 879 3 527 44 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_042200432 chr17:45365719-45385906 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 432 3 550 45 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_03_001300853 chr17:45365745-45387158 Sample_03_0013 Lung A549 853 2 576 49 0 27 0 ARHGAP27,MAP3K14,SH3D20
SE_02_017700574 chr17:45366270-45386124 Sample_02_0177 Urinary bladder J82 574 3 532 44 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_02_006900250 chr17:45366363-45385920 Sample_02_0069 Brain SF268 250 2 528 44 0 26 0 ARHGAP27,MAP3K14,SH3D20
SE_01_002900583 chr17:45368168-45374260 Sample_01_0029 Lung fibroblast-of-lung 583 3 150 11 0 16 0 ARHGAP27,MAP3K14
SE_02_021601072 chr17:45371357-45393847 Sample_02_0216 Skin NHEK_scramble 1072 4 586 66 0 28 33 ARHGAP27,SH3D20
SE_02_104301270 chr17:45371678-45419174 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1270 12 1207 121 1 118 2251 ARHGAP27
SE_01_005200369 chr17:45406106-45449407 Sample_01_0052 Blood neutrophil 369 5 1060 113 7 135 2461 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_00_002200107 chr17:45406636-45469739 Sample_00_0022 Lung lung_30y 107 16 1547 152 9 190 3297 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1,PLEKH1
SE_01_008400702 chr17:45407525-45463134 Sample_01_0084 Spleen spleen 702 8 1370 139 8 174 3134 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_034200531 chr17:45408001-45447897 Sample_02_0342 Liver HSPCs_F0 531 6 983 105 7 130 2351 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_040400079 chr17:45408220-45473678 Sample_02_0404 Mammary gland ZR-75-1_2 79 11 1602 163 10 190 3242 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1,LRRC37A4
SE_02_036100149 chr17:45408333-45463448 Sample_02_0361 Colon HT29_DMSO 149 9 1360 137 8 174 3028 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_01_009000269 chr17:45408395-45469610 Sample_01_0090 Lung upper-lobe-of-left-lung 269 7 1503 148 9 185 3157 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_01_008501341 chr17:45409181-45470024 Sample_01_0085 Stomach stomach 1341 8 1490 147 9 185 3002 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_024000188 chr17:45411682-45470008 Sample_02_0240 Colon V429_2 188 11 1419 142 9 173 2706 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_00_004100638 chr17:45414927-45470019 Sample_00_0041 Stomach stomach_3y 638 8 1345 137 9 171 2706 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_005600203 chr17:45418536-45469959 Sample_02_0056 Mammary gland HMEC 203 10 1261 120 8 171 2706 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_032300347 chr17:45423191-45463041 Sample_02_0323 Colon RKO 347 5 986 92 6 158 2576 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_042400182 chr17:45423612-45470067 Sample_02_0424 Colon SW620 182 7 1138 102 7 167 2706 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_011600500 chr17:45424619-45464194 Sample_02_0116 Mammary gland MDA-MB-231_untreat 500 4 989 88 5 158 2576 ARHGAP27,PLEKHM1,SH3D20,MIR4315-1
SE_02_035500286 chr17:45428025-45480035 Sample_02_0355 Colon HCT15 286 7 1249 124 7 203 2882 MIR4315-1,PLEKHM1,SH3D20,ARHGAP27,LRRC37A4
SE_02_008000066 chr17:45428280-45469960 Sample_02_0080 Lung Calu-3 66 7 1008 89 6 162 2577 PLEKHM1,SH3D20,ARHGAP27,MIR4315-1
SE_02_039601404 chr17:45429219-45434024 Sample_02_0396 Skin NHEK-D 1404 1 94 11 1 50 908 SH3D20,ARHGAP27,MIR4315-1
SE_03_000300242 chr17:45429505-45462887 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 242 4 817 75 5 142 2393 PLEKHM1,SH3D20,ARHGAP27,MIR4315-1
SE_02_021600051 chr17:45430213-45485239 Sample_02_0216 Skin NHEK_scramble 51 20 1304 130 7 188 2730 MIR4315-1,PLEKHM1,SH3D20,ARHGAP27,LRRC37A4
SE_02_009500427 chr17:45430284-45470667 Sample_02_0095 Mammary gland MDA-MB-468 427 5 977 86 6 131 2335 PLEKHM1,SH3D20,MIR4315-1,ARHGAP27,LRRC37A4
SE_02_016600184 chr17:45430377-45471102 Sample_02_0166 Mammary gland HCC1954_Parental 184 5 982 91 6 131 2315 PLEKHM1,SH3D20,MIR4315-1,ARHGAP27,LRRC37A4
SE_02_016700471 chr17:45430377-45471102 Sample_02_0167 Mammary gland HCC1954_LCC2 471 5 982 91 6 131 2315 PLEKHM1,SH3D20,MIR4315-1,ARHGAP27,LRRC37A4
SE_02_009700406 chr17:45430408-45469877 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 406 5 960 86 6 129 2308 PLEKHM1,SH3D20,ARHGAP27,MIR4315-1
SE_02_039800442 chr17:45430420-45470878 Sample_02_0398 Mammary gland MDA-MB-231-MCF-7 442 5 976 88 6 130 2305 PLEKHM1,SH3D20,MIR4315-1,ARHGAP27,LRRC37A4
SE_02_104301691 chr17:45436179-45468478 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1691 20 807 69 4 92 1518 PLEKHM1,ARHGAP27,MIR4315-1
SE_02_008600294 chr17:45436494-45453962 Sample_02_0086 Pancreas CAPAN1 294 1 440 35 2 63 957 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_088601699 chr17:45438774-45488509 Sample_02_0886 Skin foreskin_ p63KLF4 1699 13 1182 119 4 144 1570 MIR4315-2,PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4P
SE_02_024100174 chr17:45438902-45469958 Sample_02_0241 Colon V456 174 6 763 62 3 84 1127 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_125800813 chr17:45439166-45491453 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 813 13 1237 121 3 159 1714 MIR4315-2,PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4P
SE_02_088400637 chr17:45439551-45492071 Sample_02_0884 Colon LoVo 637 12 1242 123 3 155 1659 MIR4315-2,PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4P
SE_02_002700548 chr17:45439868-45488964 Sample_02_0027 Umbilical vein HUVEC_VEGF_4h 548 6 1144 114 3 138 1454 MIR4315-1,PLEKHM1,ARHGAP27,LRRC37A4,SH3D20
SE_02_019100015 chr17:45441329-45464669 Sample_02_0191 Stomach SNU719 15 5 578 48 2 64 799 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_021500021 chr17:45441442-45487304 Sample_02_0215 Skin NHEK_siGRHL3 21 13 1073 109 3 129 1310 MIR4315-1,PLEKHM1,ARHGAP27,LRRC37A4,SH3D20
SE_02_082700726 chr17:45441994-45488895 Sample_02_0827 Stomach normal gastric 726 8 1095 111 3 132 1372 MIR4315-2,PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4P
SE_02_039601326 chr17:45443301-45452467 Sample_02_0396 Skin NHEK-D 1326 1 210 15 1 21 162 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_035400907 chr17:45443358-45453541 Sample_02_0354 Colon Colo205 907 1 234 16 1 28 306 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_002101041 chr17:45444447-45449233 Sample_02_0021 Colon V429 1041 1 97 9 0 17 80 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_015100758 chr17:45444931-45463667 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 758 2 454 39 1 61 799 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_027000745 chr17:45445201-45462835 Sample_02_0270 Kidney PCS-400 745 3 421 35 1 58 799 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_023500036 chr17:45445868-45462301 Sample_02_0235 Peripheral blood NK 36 3 392 32 1 50 719 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_105100696 chr17:45446254-45487315 Sample_02_1051 Esophagus Eso26 696 8 951 99 3 116 1230 MIR4315-2,PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4P
SE_02_019500086 chr17:45446583-45469959 Sample_02_0195 Stomach OCUM1 86 3 558 46 2 60 849 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_020200355 chr17:45447028-45470493 Sample_02_0202 Stomach YCC7 355 4 559 45 2 62 849 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_01_004000366 chr17:45449920-45470671 Sample_01_0040 Haematopoietic and lymphoid tissue Karpas-422 366 3 507 40 2 57 849 PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4,SH3D20
SE_02_011700337 chr17:45450134-45470652 Sample_02_0117 Haematopoietic and lymphoid tissue KARPAS-422 337 3 503 39 2 57 849 PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4,SH3D20
SE_02_007900098 chr17:45452101-45485828 Sample_02_0079 Mammary gland T-47D_1 98 4 786 81 2 107 1148 MIR4315-1,PLEKHM1,ARHGAP27,LRRC37A4,SH3D20
SE_02_008600233 chr17:45456064-45473878 Sample_02_0086 Pancreas CAPAN1 233 1 425 49 2 30 491 PLEKHM1,MIR4315-1,ARHGAP27,LRRC37A4,SH3D20
SE_02_040300192 chr17:45457648-45473384 Sample_02_0403 Mammary gland T-47D_untreat 192 3 381 43 2 28 491 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1,LRRC37A4
SE_01_004600216 chr17:45460798-45471503 Sample_01_0046 Mammary gland MCF-7 216 2 252 32 1 23 130 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1,LRRC37A4
SE_02_020400154 chr17:45460882-45470255 Sample_02_0204 Stomach IM95 154 2 227 24 1 23 130 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_039400274 chr17:45461244-45471544 Sample_02_0394 Mammary gland T-47D_2 274 2 238 30 1 22 130 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1,LRRC37A4
SE_02_018700045 chr17:45461471-45469961 Sample_02_0187 Stomach KATOIII 45 5 204 20 1 20 130 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1
SE_02_041800198 chr17:45461955-45485504 Sample_02_0418 Embryo H9_Null+EZH2 198 4 527 59 2 72 511 MIR4315-1,PLEKHM1,ARHGAP27,SH3D20,LRRC37A4
SE_02_023700802 chr17:45466643-45470581 Sample_02_0237 Colon V389 802 1 76 3 0 11 130 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1,LRRC37A4
SE_02_005100153 chr17:45467034-45470663 Sample_02_0051 Mammary gland MCF-7_EtOH 153 1 71 2 0 11 130 PLEKHM1,ARHGAP27,SH3D20,MIR4315-1,LRRC37A4
SE_00_002000883 chr17:45471438-45493165 Sample_00_0020 Large intestine large-intestine_108d 883 4 498 58 1 73 587 MIR4315-1,PLEKHM1,ARHGAP27,SH3D20,LRRC37A4
Genomic distribution of SEs associated with ARHGAP27
Genome Browser

The strength of the tissue affected by the gene

Expression of ARHGAP27

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)