SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000162702
Gene: ZNF281 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:200404940-200410056 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_078100008 chr1:200095278-200553584 Sample_02_0781 Lymphoma Pfeiffer_DMSO 8 141 11724 559 49 1429 1645 KIF14,LINC00862,NR5A2,ZNF281
SE_02_076200241 chr1:200294910-200438867 Sample_02_0762 Podocyte podocyte_CTL 241 29 3527 231 14 545 918 ZNF281,LINC00862
SE_02_156600075 chr1:200301608-200446074 Sample_02_1566 Dermal Dermal fibroblast 75 34 3489 212 11 545 918 ZNF281,LINC00862
SE_02_127900109 chr1:200301990-200445326 Sample_02_1279 Bone Mesenchymal stem cells 109 28 3453 209 11 545 918 ZNF281,LINC00862
SE_02_103600494 chr1:200325119-200492407 Sample_02_1036 Mammary gland HCC70_XY018 494 66 3964 246 13 584 1103 ZNF281,LINC00862
SE_02_103500521 chr1:200330589-200443319 Sample_02_1035 Mammary gland HCC70_Vehicle 521 41 2669 176 8 442 918 ZNF281,LINC00862
SE_02_047900286 chr1:200334522-200445973 Sample_02_0479 Head and neck SCC25 286 49 2629 172 6 441 918 ZNF281,LINC00862
SE_02_083000072 chr1:200335032-200446305 Sample_02_0830 Lung H1703 SMARCA2-infected 72 25 2630 172 6 441 918 ZNF281,LINC00862
SE_03_000800041 chr1:200335585-200430700 Sample_03_0008 Lung A549_dexamethasone_7h 41 5 2236 145 6 441 918 ZNF281
SE_02_011000262 chr1:200335746-200439597 Sample_02_0110 Ovaries IOE11 262 13 2457 157 6 441 918 ZNF281
SE_03_001300035 chr1:200335757-200430668 Sample_03_0013 Lung A549 35 5 2228 145 6 441 918 ZNF281
SE_04_001000228 chr1:200335816-200430417 Sample_04_0010 Lung A549 TGFb 228 18 2218 144 6 441 918 ZNF281,LINC00862
SE_02_137800245 chr1:200336014-200439090 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 245 31 2443 157 6 441 918 ZNF281,LINC00862
SE_02_011900109 chr1:200336075-200410779 Sample_02_0119 Haematopoietic and lymphoid tissue PFEIFFER 109 62 1784 130 6 408 814 ZNF281
SE_02_044000045 chr1:200336104-200446036 Sample_02_0440 Bone LM7 45 40 2588 168 6 441 918 ZNF281,LINC00862
SE_02_030100585 chr1:200343030-200439157 Sample_02_0301 Neuroblastoma GIMEN 585 15 2254 141 5 428 841 ZNF281
SE_03_000900037 chr1:200351038-200430808 Sample_03_0009 Lung A549_dexamethasone_3h 37 4 1841 116 4 428 796 ZNF281
SE_03_000700047 chr1:200351060-200430384 Sample_03_0007 Lung A549_dexamethasone_12h 47 7 1822 114 4 428 796 ZNF281
SE_03_001500047 chr1:200351061-200430522 Sample_03_0015 Lung A549_dexamethasone_8h 47 5 1826 114 4 428 796 ZNF281
SE_03_001000039 chr1:200351235-200430523 Sample_03_0010 Lung A549_dexamethasone_1h 39 6 1821 113 4 428 796 ZNF281
SE_01_001200195 chr1:200351327-200417211 Sample_01_0012 Lung A549_dexamethasone_1h 195 8 1532 106 4 417 796 ZNF281
SE_01_000600141 chr1:200351394-200438400 Sample_01_0006 Lung A549_ethanol_1h 141 11 2028 124 4 428 796 ZNF281
SE_04_000900352 chr1:200351499-200430412 Sample_04_0009 Lung A549 352 22 1814 113 4 428 796 ZNF281,LINC00862
SE_01_005700389 chr1:200351552-200430789 Sample_01_0057 Pancreas duct PANC-1 389 13 1831 115 4 428 796 ZNF281
SE_02_150300109 chr1:200351598-200444980 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 109 33 2163 135 4 428 796 ZNF281,LINC00862
SE_03_000500049 chr1:200351606-200430057 Sample_03_0005 Lung A549_dexamethasone_0.5h 49 7 1806 113 4 428 796 ZNF281
SE_02_080900125 chr1:200351819-200417871 Sample_02_0809 Mammary gland T47D Serum 125 12 1534 106 4 418 796 ZNF281,LINC00862
SE_02_082900043 chr1:200351824-200488985 Sample_02_0829 Lung H1703 SMARCA4-infected 43 29 3215 197 9 558 981 ZNF281,LINC00862
SE_02_053200137 chr1:200351983-200417317 Sample_02_0532 Mammary gland T47D 137 18 1523 106 4 417 796 ZNF281,LINC00862
SE_02_101700525 chr1:200352039-200417703 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 525 10 1529 106 4 417 796 ZNF281,LINC00862
SE_02_075600052 chr1:200359984-200413152 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 52 16 1221 80 4 391 796 ZNF281,LINC00862
SE_02_006500023 chr1:200361425-200414182 Sample_02_0065 Embryo KO2-Late_G1 23 8 1209 76 3 391 796 ZNF281
SE_02_101500264 chr1:200361687-200417020 Sample_02_1015 Embryo H9_ Undifferentiated 264 11 1259 76 3 394 796 ZNF281,LINC00862
SE_02_117200065 chr1:200361964-200418332 Sample_02_1172 Embryo H9 WT 65 11 1285 76 3 396 796 ZNF281,LINC00862
SE_03_000400047 chr1:200361968-200430226 Sample_03_0004 Lung A549_dexamethasone_4h 47 4 1539 83 3 406 796 ZNF281
SE_02_157000023 chr1:200362124-200425316 Sample_02_1570 iPSCs EiPSC 23 21 1439 79 3 397 796 ZNF281,LINC00862
SE_02_127700030 chr1:200363415-200417982 Sample_02_1277 Prostate PC3_COMBO 30 21 1240 73 2 394 796 ZNF281,LINC00862
SE_02_039400225 chr1:200363549-200418174 Sample_02_0394 Mammary gland T-47D_2 225 14 1241 72 2 394 796 ZNF281
SE_02_152300095 chr1:200363579-200430069 Sample_02_1523 Lung A549 DMSO 95 13 1499 79 2 404 796 ZNF281,LINC00862
SE_02_056100131 chr1:200363949-200416785 Sample_02_0561 Lung A549_1 131 16 1193 72 2 392 796 ZNF281,LINC00862,KIF14
SE_02_081100583 chr1:200377582-200417790 Sample_02_0811 Thyroid BCPAP 583 14 929 45 1 327 645 ZNF281,LINC00862
SE_02_077001125 chr1:200379079-200438334 Sample_02_0770 Ovary OVCA429_shLuc 1125 16 1384 61 1 337 645 ZNF281,LINC00862
SE_02_076900648 chr1:200379165-200438349 Sample_02_0769 Ovary HEYA8 648 26 1380 61 1 337 645 ZNF281,LINC00862
SE_02_156700242 chr1:200386948-200423521 Sample_02_1567 iPSCs CiPSC 242 12 870 33 1 303 645 ZNF281,LINC00862
SE_02_003600443 chr1:200388209-200423745 Sample_02_0036 Embryo H7 443 8 854 33 1 302 645 ZNF281
SE_02_082800071 chr1:200388658-200489380 Sample_02_0828 Lung H1703 Control-infected 71 21 2394 121 6 441 830 ZNF281,LINC00862
SE_02_049900746 chr1:200397362-200446056 Sample_02_0499 Fetal lung IMR90 IR Senescence 746 21 1129 47 1 305 645 ZNF281,LINC00862
SE_03_001400286 chr1:200397852-200417879 Sample_03_0014 Lung A549_dexamethasone_2h 286 1 458 15 1 295 645 ZNF281
SE_03_001600295 chr1:200397944-200430812 Sample_03_0016 Lung A549_dexamethasone_6h 295 2 750 24 1 305 645 ZNF281
SE_02_107400008 chr1:200398094-200490496 Sample_02_1074 Lymphoma BC-1 8 29 2160 105 6 439 830 ZNF281,LINC00862
SE_02_149700292 chr1:200398298-200438359 Sample_02_1497 Brain SHEP-21N 292 7 933 32 1 305 645 ZNF281,LINC00862
SE_00_001800402 chr1:200399418-200412871 Sample_00_0018 Dermal fibroblasts iPS-18axian 402 2 316 8 0 289 645 ZNF281
SE_02_032700292 chr1:200399527-200417750 Sample_02_0327 Liver hepatocytes_d6 292 1 418 13 0 293 645 ZNF281
SE_02_137501046 chr1:200399632-200417736 Sample_02_1375 Pancreas Pancreatic_tumor_associated_fibroblasts_B0010A_untreated 1046 8 416 13 0 293 645 ZNF281,LINC00862
SE_02_149800317 chr1:200399663-200438838 Sample_02_1498 Brain SHEP-21N_DOX_2h 317 11 912 32 0 304 645 ZNF281,LINC00862
SE_02_032500610 chr1:200400331-200417635 Sample_02_0325 Liver hepatocytes_d1 610 1 399 13 0 293 645 ZNF281
SE_02_032600478 chr1:200400522-200423877 Sample_02_0326 Liver hepatocytes_d3 478 3 537 16 0 295 645 ZNF281
SE_02_150700438 chr1:200400678-200438301 Sample_02_1507 Brain SHEP-21N_DOX_24h 438 8 879 29 0 304 645 ZNF281,LINC00862
SE_02_055400400 chr1:200401235-200445367 Sample_02_0554 Other Aska shSSX 400 9 1013 40 0 301 645 ZNF281,LINC00862
SE_02_060601153 chr1:200401241-200445302 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 1153 9 1013 40 0 300 645 ZNF281,LINC00862
SE_02_145201270 chr1:200401419-200417345 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1270 3 366 11 0 288 645 ZNF281,LINC00862
SE_02_060501080 chr1:200401461-200446100 Sample_02_0605 Skin Skin Fibroblast_DMSO 1080 11 1031 43 0 291 645 ZNF281,LINC00862
SE_02_009300437 chr1:200403428-200429915 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 437 4 593 16 0 288 645 ZNF281
SE_02_127300794 chr1:200404790-200420415 Sample_02_1273 Cervix HeLa 794 5 362 9 0 276 645 ZNF281,LINC00862
SE_02_048100944 chr1:200405132-200439394 Sample_02_0481 Mammary gland MDA-MB231 944 9 794 29 0 271 645 ZNF281,LINC00862
SE_02_049800348 chr1:200405984-200437766 Sample_02_0498 Fetal lung IMR90 Senescent_1 348 11 735 26 0 233 645 ZNF281,LINC00862
SE_02_150200548 chr1:200406216-200445290 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 548 18 896 37 0 229 634 ZNF281,LINC00862
SE_02_145700308 chr1:200406356-200413568 Sample_02_1457 Embryo HUES8 WT 308 4 163 3 0 211 621 ZNF281,LINC00862
SE_02_113100789 chr1:200406413-200438320 Sample_02_1131 Pancreas T3M4 wt 789 9 743 26 0 226 620 ZNF281,LINC00862
SE_02_039500559 chr1:200406972-200431159 Sample_02_0395 Mammary gland BT-549 559 5 548 17 0 187 591 ZNF281
SE_02_088301094 chr1:200407030-200439034 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 1094 6 741 27 0 186 578 ZNF281,LINC00862
SE_02_113600229 chr1:200407139-200438903 Sample_02_1136 Bone U2OS-anaphase/telophase 229 7 733 27 0 177 572 ZNF281,LINC00862
SE_02_086901020 chr1:200407146-200455610 Sample_02_0869 Fibroblast VH10_NO_UV 1020 19 1109 55 0 177 570 ZNF281,LINC00862
SE_02_127500397 chr1:200407171-200458232 Sample_02_1275 Prostate PC3_Vorinostat 397 14 1176 62 1 176 569 ZNF281,LINC00862
SE_02_125900259 chr1:200407573-200438347 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 259 7 710 25 0 159 531 ZNF281,LINC00862
SE_02_030500257 chr1:200408308-200443669 Sample_02_0305 Neuroblastoma SH-EP 257 4 809 35 0 129 471 ZNF281
SE_02_012500519 chr1:200408658-200413992 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 519 1 127 7 0 102 441 ZNF281
SE_02_150100365 chr1:200408786-200445017 Sample_02_1501 Brain SHEP-21N_NOSPIKE 365 12 832 36 0 111 434 ZNF281,LINC00862
SE_02_075501499 chr1:200408898-200412784 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1499 1 97 2 0 91 423 ZNF281,LINC00862
SE_02_006400679 chr1:200408903-200413998 Sample_02_0064 Embryo DN-Early_G1 679 1 126 7 0 93 423 ZNF281
SE_02_107500017 chr1:200409022-200488817 Sample_02_1075 Lymphoma BC-3 17 26 1884 98 5 233 589 ZNF281,LINC00862
SE_01_003300474 chr1:200409180-200412951 Sample_01_0033 Embryo H9 474 1 95 2 0 82 384 ZNF281
SE_02_028100194 chr1:200409791-200439937 Sample_02_0281 Bone U2OS 194 3 695 27 0 67 215 ZNF281
Genomic distribution of SEs associated with ZNF281
Genome Browser

The strength of the tissue affected by the gene

Expression of ZNF281

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)