SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000160185
Gene: UBASH3A Gene type: protein_coding
Strand: + External links:
Genomic region: chr21:42403447-42447684 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_022100107 chr21:42367155-42428985 Sample_02_0221 Blood CCRF-CEM 107 6 2247 216 12 161 2235 UBASH3A,TMPRSS3,TFF2,TFF1
SE_02_022600419 chr21:42367248-42427558 Sample_02_0226 Blood KOPTK1 419 7 2190 214 11 161 2235 UBASH3A,TMPRSS3,TFF2,TFF1
SE_02_078200237 chr21:42368279-42427397 Sample_02_0782 Blood MEC1 237 12 2145 211 11 161 2235 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_109900242 chr21:42370082-42406616 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 242 14 1364 128 7 111 1729 TMPRSS3,UBASH3A,TFF2,TFF1
SE_01_004300450 chr21:42372457-42428886 Sample_01_0043 Blood KOPT-K1 450 7 2037 200 11 159 2136 UBASH3A,TMPRSS3,TFF2,TFF1
SE_02_012600068 chr21:42373421-42466194 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 68 12 3206 312 24 184 2732 UBASH3A,TMPRSS3,TFF2,RSPH1,TFF1,SLC37A1
SE_02_045600063 chr21:42375016-42465989 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 63 18 3119 306 24 182 2732 TMPRSS3,UBASH3A,RSPH1,TFF2,TFF1,SLC37A1
SE_02_104900101 chr21:42375424-42470294 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 101 65 3235 312 24 182 2732 TMPRSS3,UBASH3A,RSPH1,TFF2,TFF1,SLC37A1
SE_02_078300039 chr21:42379160-42476440 Sample_02_0783 Blood MEC2 39 29 3283 330 24 153 2703 RSPH1,TMPRSS3,UBASH3A,TFF2,TFF1,SLC37A1
SE_02_122900684 chr21:42383926-42411184 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 684 16 927 109 7 70 925 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_122700268 chr21:42384560-42423538 Sample_02_1227 Bone marrow U266 268 11 1348 163 10 98 1259 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_012800202 chr21:42387032-42465377 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 202 20 2646 275 22 120 1939 UBASH3A,TMPRSS3,TFF2,RSPH1,TFF1,SLC37A1
SE_02_013200057 chr21:42390574-42466194 Sample_02_0132 Lung 1015_CL 57 10 2521 270 21 102 1624 UBASH3A,TMPRSS3,TFF2,RSPH1,TFF1,SLC37A1
SE_02_012700086 chr21:42391262-42466076 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 86 13 2501 267 21 101 1623 UBASH3A,TMPRSS3,TFF2,RSPH1,TFF1,SLC37A1
SE_02_013100062 chr21:42391262-42466076 Sample_02_0131 Lung 1015_PT 62 14 2501 267 21 101 1623 UBASH3A,TMPRSS3,TFF2,RSPH1,TFF1,SLC37A1
SE_00_000700134 chr21:42392538-42462649 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 134 8 2385 254 21 101 1623 UBASH3A,TMPRSS3,TFF2,RSPH1,TFF1,SLC37A1
SE_02_023400587 chr21:42392700-42426752 Sample_02_0234 Tonsil Th17 587 7 1162 148 7 73 901 UBASH3A,TMPRSS3,TFF2,TFF1
SE_00_004400638 chr21:42392770-42426624 Sample_00_0044 Cord blood T-cell 638 6 1157 148 7 73 884 UBASH3A,TMPRSS3,TFF2,TFF1
SE_02_059300377 chr21:42392865-42425693 Sample_02_0593 Fetal spleenocytes fetal naive T cells 377 7 1117 145 7 72 874 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_045700076 chr21:42392876-42426518 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 76 9 1147 146 7 72 874 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_059100500 chr21:42392978-42425268 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 500 6 1104 145 7 70 874 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_045400105 chr21:42393181-42467042 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 105 18 2484 266 21 101 1623 TMPRSS3,UBASH3A,RSPH1,TFF2,TFF1,SLC37A1
SE_02_057600782 chr21:42393338-42406885 Sample_02_0576 Blood HEL_sgLKB1e2 782 3 477 73 4 23 439 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_057900825 chr21:42393610-42406899 Sample_02_0579 Blood HEL_sgNeg2 825 4 472 71 4 23 439 TMPRSS3,UBASH3A,TFF2,TFF1
SE_02_034900198 chr21:42396884-42428687 Sample_02_0349 Peripheral blood CUTLL1_dimer-mutant 198 5 1125 136 8 66 727 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_024700322 chr21:42396889-42408750 Sample_02_0247 Haematopoietic and lymphoid tissue MOLT4_2 322 1 429 64 4 16 221 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_003500327 chr21:42397419-42428940 Sample_02_0035 Peripheral blood CUTLL1_GSI_wash 327 7 1103 134 8 64 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_017600272 chr21:42397441-42429030 Sample_02_0176 Peripheral blood LOUCY 272 4 1105 133 8 64 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_034800240 chr21:42397488-42429328 Sample_02_0348 Peripheral blood CUTLL1_wild-type 240 5 1107 133 8 64 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_003400332 chr21:42397597-42428535 Sample_02_0034 Peripheral blood CUTLL1_GSI 332 5 1076 132 8 64 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_01_002500063 chr21:42397714-42465514 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 63 15 2281 242 21 92 1381 UBASH3A,TFF2,RSPH1,TFF1,TMPRSS3,SLC37A1
SE_02_003100310 chr21:42397861-42429088 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 310 3 1085 132 8 64 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_111200180 chr21:42398480-42465996 Sample_02_1112 T lymphocyte THP-6 T-ALL 180 12 2263 243 21 92 1381 UBASH3A,RSPH1,TFF2,TFF1,TMPRSS3,SLC37A1
SE_02_104000044 chr21:42398493-42476991 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 44 28 2624 278 21 93 1569 UBASH3A,RSPH1,TFF2,TFF1,TMPRSS3,SLC37A1
SE_02_022300028 chr21:42399788-42431843 Sample_02_0223 Haematopoietic and lymphoid tissue MOLT4_1 28 2 1108 131 8 63 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_104200126 chr21:42400150-42456974 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 126 19 1946 205 19 90 1381 UBASH3A,RSPH1,TFF2,TFF1,TMPRSS3,SLC37A1
SE_02_023300497 chr21:42400180-42426486 Sample_02_0233 Tonsil Th1 497 5 899 117 7 62 632 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_022500253 chr21:42400266-42427593 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 253 3 943 121 7 63 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_045500246 chr21:42400495-42427285 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 246 10 929 120 7 63 703 UBASH3A,TFF2,TFF1,TMPRSS3
SE_00_000800188 chr21:42401031-42426950 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 188 3 895 118 7 63 676 UBASH3A,TFF2,TFF1,TMPRSS3
SE_02_022200210 chr21:42401184-42429368 Sample_02_0222 Blood DU-528 210 2 975 119 8 63 703 UBASH3A,TFF1,TMPRSS3
SE_02_082600886 chr21:42401217-42427173 Sample_02_0826 Stomach gastric tumor 886 16 902 117 7 63 703 UBASH3A,TFF1,TMPRSS3
SE_00_000900964 chr21:42401381-42426416 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 964 4 853 113 7 62 632 UBASH3A,TFF1,TMPRSS3
SE_00_004700250 chr21:42401432-42425860 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 250 9 829 113 7 62 632 UBASH3A,TFF1,TMPRSS3
SE_02_022400197 chr21:42402636-42428897 Sample_02_0224 Haematopoietic and lymphoid tissue P12-ICHIKAWA 197 2 912 109 7 63 703 UBASH3A,TFF1,TMPRSS3
SE_02_002200098 chr21:42402966-42464632 Sample_02_0022 Blood CD8donorA 98 19 2077 217 20 91 1381 UBASH3A,RSPH1,TFF1,TMPRSS3,SLC37A1
SE_02_014800599 chr21:42403461-42425338 Sample_02_0148 Blood CD8_T_cells 599 3 745 101 6 56 632 UBASH3A,TFF1,TMPRSS3
SE_02_002300303 chr21:42404411-42425839 Sample_02_0023 Blood CD8donorC 303 7 721 95 5 53 528 UBASH3A,TFF1,TMPRSS3
SE_02_104600705 chr21:42405124-42487037 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 705 32 2724 271 20 99 1768 UBASH3A,RSPH1,TFF1,TMPRSS3,SLC37A1
SE_02_104500195 chr21:42405167-42450399 Sample_02_1045 Peripheral blood CD4+ CD7- cells_CTCL992 195 17 1520 155 13 78 1277 UBASH3A,RSPH1,TFF1,TMPRSS3,SLC37A1
SE_02_059200411 chr21:42405444-42425120 Sample_02_0592 PBMCs adult CD4+CD25hiCD127lo regulatory T cells 411 4 664 82 4 49 528 UBASH3A,TFF1,TMPRSS3
SE_02_104400473 chr21:42405760-42425115 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 473 5 653 78 4 49 528 UBASH3A,TFF1,TMPRSS3
SE_02_104800424 chr21:42405777-42462005 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 424 21 1909 184 18 80 1277 UBASH3A,RSPH1,TFF1,TMPRSS3,SLC37A1
SE_02_024700281 chr21:42418319-42429524 Sample_02_0247 Haematopoietic and lymphoid tissue MOLT4_2 281 1 390 29 2 12 135 UBASH3A,TMPRSS3
SE_01_004400256 chr21:42420086-42429201 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 256 1 292 21 2 4 71 UBASH3A,TMPRSS3
SE_02_082600613 chr21:42441113-42484756 Sample_02_0826 Stomach gastric tumor 613 30 1440 141 11 26 764 UBASH3A,RSPH1,TMPRSS3,SLC37A1
SE_02_003400382 chr21:42446510-42466094 Sample_02_0034 Peripheral blood CUTLL1_GSI 382 7 641 64 9 9 146 UBASH3A,SLC37A1,RSPH1
Genomic distribution of SEs associated with UBASH3A
Genome Browser

The strength of the tissue affected by the gene

Expression of UBASH3A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)