SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000247092
Gene: SNHG10 Gene type: lncRNA
Strand: - External links:
Genomic region: chr14:95521943-95534889 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_109700044 chr14:95441002-95534568 Sample_02_1097 Haematopoietic and lymphoid tissue 697 44 47 3004 253 15 254 1327 SYNE3,SCARNA13,SNHG10,GLRX5,LINC00341
SE_02_013200168 chr14:95462137-95536844 Sample_02_0132 Lung 1015_CL 168 15 2356 190 14 200 826 GLRX5,SNHG10,C14ORF49,SCARNA13
SE_02_013100200 chr14:95463000-95536874 Sample_02_0131 Lung 1015_PT 200 11 2319 191 14 200 826 GLRX5,SNHG10,C14ORF49,SCARNA13
SE_00_003500521 chr14:95463078-95536051 Sample_00_0035 Sigmoid colon sigmoid-colon 521 21 2296 185 14 200 826 GLRX5,SNHG10,C14ORF49,SCARNA13
SE_00_004000733 chr14:95463115-95535655 Sample_00_0040 Spleen spleen_30y 733 13 2281 183 14 198 826 GLRX5,SNHG10,C14ORF49,SCARNA13
SE_00_003400201 chr14:95466518-95538222 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 201 18 2252 181 12 177 694 GLRX5,SNHG10,C14ORF49,SCARNA13
SE_02_056900229 chr14:95472318-95533131 Sample_02_0569 Periodontal ligament mesenchymal stem cell 229 36 1894 140 10 131 136 SYNE3,SNHG10,GLRX5,SCARNA13
SE_02_131100894 chr14:95479468-95534848 Sample_02_1311 Bone marrow HDMSCs 894 12 1706 143 4 132 272 SCARNA13,SNHG10,SYNE3,GLRX5
SE_02_073400254 chr14:95479604-95534647 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 254 11 1695 141 4 131 235 SCARNA13,SNHG10,SYNE3,GLRX5
SE_00_002200604 chr14:95482943-95536103 Sample_00_0022 Lung lung_30y 604 9 1593 141 4 143 459 GLRX5,SNHG10,SCARNA13,C14ORF49
SE_00_000600504 chr14:95493922-95535085 Sample_00_0006 Blood CD14-positive-monocyte 504 5 1227 127 4 115 332 GLRX5,SNHG10,SCARNA13,C14ORF49
SE_02_002200418 chr14:95495765-95536252 Sample_02_0022 Blood CD8donorA 418 12 1213 128 4 121 459 GLRX5,SNHG10,SCARNA13,C14ORF49
SE_02_001600029 chr14:95501016-95548654 Sample_02_0016 Blood erythroblasts 29 6 1412 186 7 124 599 GLRX5,SNHG10,SCARNA13,C14ORF49
SE_00_000800518 chr14:95513355-95536549 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 518 3 670 85 1 77 459 GLRX5,SNHG10,SCARNA13,C14ORF49
SE_02_030100735 chr14:95514132-95537987 Sample_02_0301 Neuroblastoma GIMEN 735 1 682 91 1 77 459 GLRX5,SNHG10,SCARNA13,C14ORF49
SE_02_106000384 chr14:95514672-95534692 Sample_02_1060 Bone TC71_SA2 KO 384 9 558 72 1 60 249 SCARNA13,SNHG10,SYNE3,GLRX5
SE_02_146800053 chr14:95518393-95549536 Sample_02_1468 Blood HUDEP-2_WT 53 1 914 137 4 62 599 GLRX5,SCARNA13,SNHG10,SYNE3
SE_02_109600146 chr14:95521030-95539354 Sample_02_1096 Blood CD34 Erythroid cells_Don003 146 1 540 83 1 40 459 GLRX5,SCARNA13,SNHG10,SYNE3
SE_02_146700043 chr14:95521909-95549725 Sample_02_1467 Blood HUDEP-2_LRFKO 43 1 843 131 4 47 599 GLRX5,SCARNA13,SNHG10,SYNE3
SE_02_146600073 chr14:95522042-95547782 Sample_02_1466 Blood HUDEP-2_BCL11AKO 73 1 781 122 4 47 599 GLRX5,SCARNA13,SNHG10,SYNE3
SE_02_004900639 chr14:95522721-95535772 Sample_02_0049 Embryo endodermal CyT49_GTtoH 639 2 394 56 1 37 459 GLRX5,SNHG10,SCARNA13,C14ORF49
SE_02_109500224 chr14:95530570-95547030 Sample_02_1095 Blood CD34 Erythroid cells_Don002 224 1 485 78 2 38 599 GLRX5,SCARNA13,SNHG10
Genomic distribution of SEs associated with SNHG10
Genome Browser

The strength of the tissue affected by the gene

Expression of SNHG10

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)