SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000182902
Gene: SLC25A18 Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:17563450-17590995 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_009400417 chr22:17465463-17576550 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 417 28 3646 226 8 194 1815 CECR2,SLC25A18,LOC101929372
SE_02_089700464 chr22:17551520-17578829 Sample_02_0897 Heart left ventricle_LV1325 464 13 942 71 2 34 385 CECR2,SLC25A18,LOC101929372,ATP6V1E1
SE_02_088900596 chr22:17552419-17586939 Sample_02_0889 Heart left ventricle_LV1183 596 10 1168 84 2 43 817 CECR2,SLC25A18,LOC101929372,ATP6V1E1
SE_02_089201142 chr22:17552453-17578809 Sample_02_0892 Heart left ventricle_LV1215 1142 10 916 70 2 30 320 CECR2,SLC25A18,LOC101929372
SE_02_090200505 chr22:17552721-17579174 Sample_02_0902 Heart left ventricle_LV1558 505 11 912 67 2 30 314 CECR2,SLC25A18,LOC101929372,ATP6V1E1
SE_02_059400182 chr22:17556504-17608196 Sample_02_0594 iPSC-derived neural progenitors 182 12 1793 167 5 48 1510 CECR2,SLC25A18,LOC101929372,ATP6V1E1,BCL2L13
SE_02_103200680 chr22:17557111-17579468 Sample_02_1032 Head and neck SCC1 JQ1 680 11 803 61 2 14 141 CECR2,SLC25A18,LOC101929372,ATP6V1E1
SE_02_088700760 chr22:17558089-17579233 Sample_02_0887 Heart left ventricle_LV1121 760 6 771 61 2 7 141 CECR2,SLC25A18,LOC101929372,ATP6V1E1
SE_02_088800696 chr22:17558172-17578828 Sample_02_0888 Heart left ventricle_LV1160 696 8 760 61 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_01_009800743 chr22:17558175-17579124 Sample_01_0098 Heart left ventricle_51y 743 8 765 61 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_02_078900134 chr22:17558187-17585275 Sample_02_0789 Brain 3752 134 8 956 69 2 19 638 SLC25A18,LOC101929372,ATP6V1E1
SE_02_089000711 chr22:17558213-17578626 Sample_02_0890 Heart left ventricle_LV1200 711 10 754 61 2 6 141 SLC25A18,LOC101929372
SE_02_089800726 chr22:17558242-17579015 Sample_02_0898 Heart left ventricle_LV1356 726 12 760 61 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_02_090100819 chr22:17558424-17579048 Sample_02_0901 Heart left ventricle_LV1471 819 8 752 61 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_02_120300480 chr22:17558716-17581976 Sample_02_1203 Brain NB1 480 8 819 61 2 13 444 SLC25A18,LOC101929372,ATP6V1E1
SE_02_066001029 chr22:17558791-17579067 Sample_02_0660 Mammary gland MCF10DCIS 1029 7 736 58 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_02_075300161 chr22:17558869-17593514 Sample_02_0753 Embryo ES-derived progenitors_FG type 161 9 1222 90 2 31 1287 SLC25A18,LOC101929372,ATP6V1E1,BCL2L13
SE_00_004600907 chr22:17558904-17578704 Sample_00_0046 Heart right ventricle_34y 907 4 723 58 2 6 141 SLC25A18,LOC101929372
SE_02_089600751 chr22:17559026-17578858 Sample_02_0896 Heart left ventricle_LV1294 751 6 723 58 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_02_046500381 chr22:17559147-17593579 Sample_02_0465 Adipose subcutaneous adipocytes 381 13 1215 87 2 31 1287 SLC25A18,LOC101929372,ATP6V1E1,BCL2L13
SE_02_118100261 chr22:17559196-17581209 Sample_02_1181 Brain GBM10 261 5 777 57 2 12 343 SLC25A18,LOC101929372,ATP6V1E1
SE_02_097200134 chr22:17559554-17588840 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 134 11 1037 74 2 25 910 SLC25A18,LOC101929372,ATP6V1E1,BCL2L13
SE_02_078800228 chr22:17560858-17587380 Sample_02_0788 Brain 3565 228 10 917 66 2 25 726 SLC25A18,LOC101929372,ATP6V1E1
SE_00_005700687 chr22:17561286-17578586 Sample_00_0057 Heart right ventricle 3y 687 8 622 52 2 6 141 SLC25A18,LOC101929372
SE_02_085700320 chr22:17561286-17601539 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 320 7 1421 115 5 39 1510 SLC25A18,LOC101929372,ATP6V1E1,BCL2L13
SE_02_118700472 chr22:17561872-17579129 Sample_02_1187 Brain GBM16 472 8 615 51 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_02_120400443 chr22:17562010-17582225 Sample_02_1204 Brain NB2 443 7 691 53 2 13 444 SLC25A18,LOC101929372,ATP6V1E1,CECR2,BCL2L13
SE_02_120500674 chr22:17562110-17593623 Sample_02_1205 Brain NB3 674 12 1106 83 2 31 1287 SLC25A18,LOC101929372,ATP6V1E1,BCL2L13,CECR2
SE_02_118400487 chr22:17562115-17578951 Sample_02_1184 Brain GBM13 487 9 610 51 2 6 141 SLC25A18,LOC101929372,ATP6V1E1
SE_02_120000308 chr22:17562126-17588434 Sample_02_1200 Brain GBM36 308 7 926 69 2 25 856 SLC25A18,LOC101929372,ATP6V1E1
SE_02_117301058 chr22:17562134-17581547 Sample_02_1173 Brain GBM01 1058 9 680 53 2 13 430 SLC25A18,LOC101929372,ATP6V1E1
SE_02_097600332 chr22:17562135-17581362 Sample_02_0976 Brain H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac 332 7 672 53 2 12 384 SLC25A18,LOC101929372,ATP6V1E1
SE_02_121100284 chr22:17562137-17578669 Sample_02_1211 Brain GBM21 284 11 605 51 2 6 141 SLC25A18,LOC101929372
SE_02_117400211 chr22:17562174-17580002 Sample_02_1174 Brain GBM02 211 11 646 52 2 6 230 SLC25A18,LOC101929372,ATP6V1E1
SE_02_078500124 chr22:17563446-17578713 Sample_02_0785 Brain 2097 124 5 566 48 2 1 117 SLC25A18,LOC101929372
SE_02_104603333 chr22:17565748-17587907 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 3333 6 797 58 2 20 712 SLC25A18,LOC101929372,ATP6V1E1
SE_00_005201142 chr22:17566925-17578824 Sample_00_0052 Heart left ventricle 3y 1142 6 453 41 2 1 75 SLC25A18,LOC101929372,ATP6V1E1
SE_02_096300395 chr22:17568273-17579693 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 395 3 420 36 1 1 95 SLC25A18,LOC101929372,ATP6V1E1
SE_02_079500192 chr22:17568653-17578878 Sample_02_0795 Brain 1953 192 4 385 35 1 1 75 SLC25A18,LOC101929372,ATP6V1E1
SE_02_079300224 chr22:17568743-17578933 Sample_02_0793 Brain MES20 224 4 381 35 1 1 75 SLC25A18,LOC101929372,ATP6V1E1
SE_02_143201230 chr22:17569113-17614372 Sample_02_1432 Bone A673 STAG2 WT 1230 15 1528 176 4 41 1502 SLC25A18,LOC101929372,ATP6V1E1,BCL2L13
SE_02_066100457 chr22:17569279-17578996 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 457 6 366 34 1 1 75 SLC25A18,LOC101929372,ATP6V1E1
SE_02_141700436 chr22:17569711-17579444 Sample_02_1417 Brain SF7761 436 6 364 32 1 1 75 SLC25A18,LOC101929372,ATP6V1E1
Genomic distribution of SEs associated with SLC25A18
Genome Browser

The strength of the tissue affected by the gene

Expression of SLC25A18

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)