SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000235904
Gene: RBMS3-AS3 Gene type: lncRNA
Strand: - External links:
Genomic region: chr3:29054570-29290726 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_084000326 chr3:29266304-29292066 Sample_02_0840 Embryo hNPCs_R1159Q/+ 326 5 666 30 3 89 105 RBMS3,RBMS3-AS3
SE_02_087900154 chr3:29268894-29337899 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 154 19 1847 52 7 200 105 RBMS3,RBMS3-AS3
SE_02_088100450 chr3:29268955-29292015 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 450 4 589 26 3 82 105 RBMS3,RBMS3-AS3
SE_02_107400299 chr3:29273652-29287951 Sample_02_1074 Lymphoma BC-1 299 3 352 15 3 59 105 RBMS3,RBMS3-AS3
SE_01_009400876 chr3:29274995-29292298 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 876 4 420 16 3 76 105 RBMS3,RBMS3-AS3
SE_01_011100006 chr3:29275294-29496590 Sample_01_0111 Brain SK-N-SH 6 87 6494 148 30 491 208 RBMS3,RBMS3-AS3
SE_02_091400591 chr3:29275318-29291513 Sample_02_0914 Heart left ventricle_DCM_LV1342 591 7 391 16 3 76 105 RBMS3,RBMS3-AS3
SE_02_091000979 chr3:29275342-29292348 Sample_02_0910 Heart left ventricle_DCM_LV1275 979 6 412 16 3 76 105 RBMS3,RBMS3-AS3
SE_02_124500111 chr3:29275408-29349473 Sample_02_1245 Brain LAN5_Ethanol 111 27 1971 48 10 233 105 RBMS3,RBMS3-AS3
SE_02_124600495 chr3:29275515-29288514 Sample_02_1246 Brain LAN5_ATRA 495 5 318 13 3 68 105 RBMS3,RBMS3-AS3
SE_02_082500081 chr3:29277186-29565563 Sample_02_0825 Stomach SNU484 81 140 8430 256 35 572 208 RBMS3,RBMS3-AS3
SE_02_091201095 chr3:29277828-29292042 Sample_02_0912 Heart left ventricle_DCM_LV1300 1095 6 328 14 3 76 105 RBMS3,RBMS3-AS3
SE_02_115400023 chr3:29278192-29439475 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 23 33 4633 78 20 403 172 RBMS3,RBMS3-AS3
SE_02_110400093 chr3:29278202-29354900 Sample_02_1104 Brain NB-69 93 20 2049 55 10 234 105 RBMS3,RBMS3-AS3
SE_02_076201905 chr3:29278277-29293326 Sample_02_0762 Podocyte podocyte_CTL 1905 4 360 14 3 77 105 RBMS3,RBMS3-AS3
SE_02_091700899 chr3:29278283-29291327 Sample_02_0917 Heart left ventricle_DCM_LV1433 899 7 302 14 3 71 105 RBMS3,RBMS3-AS3
SE_02_143800238 chr3:29278285-29361075 Sample_02_1438 Liver LSEC 238 23 2260 58 10 238 105 RBMS3,RBMS3-AS3
SE_02_090501120 chr3:29278423-29292990 Sample_02_0905 Heart left ventricle_DCM_LV1033 1120 8 344 14 2 77 105 RBMS3,RBMS3-AS3
SE_01_009300852 chr3:29278527-29340388 Sample_01_0093 Aorta ascending aorta 852 15 1622 40 6 197 105 RBMS3,RBMS3-AS3
SE_02_090800299 chr3:29278560-29353833 Sample_02_0908 Heart left ventricle_DCM_LV1262 299 31 2004 54 9 233 105 RBMS3,RBMS3-AS3
SE_02_081100538 chr3:29278604-29287534 Sample_02_0811 Thyroid BCPAP 538 3 203 10 2 57 105 RBMS3,RBMS3-AS3
SE_02_048101257 chr3:29278671-29288617 Sample_02_0481 Mammary gland MDA-MB231 1257 2 222 10 2 66 105 RBMS3,RBMS3-AS3
SE_02_090701363 chr3:29278794-29292195 Sample_02_0907 Heart left ventricle_DCM_LV1223 1363 4 301 12 2 74 105 RBMS3,RBMS3-AS3
SE_02_152201074 chr3:29278821-29294178 Sample_02_1522 Skin A375 RTKi 1074 2 358 13 3 76 105 RBMS3,RBMS3-AS3
SE_02_090601243 chr3:29278876-29292059 Sample_02_0906 Heart left ventricle_DCM_LV1072 1243 6 295 12 2 74 105 RBMS3,RBMS3-AS3
SE_02_091301203 chr3:29278905-29292032 Sample_02_0913 Heart left ventricle_DCM_LV1304 1203 5 295 12 2 74 105 RBMS3,RBMS3-AS3
SE_02_090900957 chr3:29278918-29292430 Sample_02_0909 Heart left ventricle_DCM_LV1264 957 7 305 12 2 73 105 RBMS3,RBMS3-AS3
SE_02_115300006 chr3:29278977-29654218 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 6 86 10914 540 40 668 241 RBMS3,RBMS3-AS3
SE_02_088201028 chr3:29279070-29291990 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1028 4 290 12 2 73 105 RBMS3,RBMS3-AS3
SE_02_143700140 chr3:29279090-29453642 Sample_02_1437 Liver LSEC-TNF 140 51 5043 90 23 423 172 RBMS3,RBMS3-AS3
SE_02_127901235 chr3:29279117-29287918 Sample_02_1279 Bone Mesenchymal stem cells 1235 1 197 9 2 56 105 RBMS3,RBMS3-AS3
SE_02_087800531 chr3:29279137-29293768 Sample_02_0878 Ovary SVOG3e cells_noDox_control 531 5 343 12 2 75 105 RBMS3,RBMS3-AS3
SE_02_151700323 chr3:29279157-29294747 Sample_02_1517 Mammary gland non-transformed human mammary epithelial cell 323 6 369 13 3 75 105 RBMS3,RBMS3-AS3
SE_02_061000776 chr3:29279201-29289962 Sample_02_0610 Liposarcoma MLS 1765-92 776 3 242 10 2 68 105 RBMS3,RBMS3-AS3
SE_02_088300684 chr3:29279224-29299303 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 684 7 472 15 3 87 105 RBMS3,RBMS3-AS3
SE_02_055600133 chr3:29279236-29348381 Sample_02_0556 iPSCs BOFS hiPSC cl1 133 11 1826 43 9 229 105 RBMS3,RBMS3-AS3
SE_02_088000440 chr3:29279261-29289287 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 440 1 226 9 2 68 105 RBMS3,RBMS3-AS3
SE_02_047400789 chr3:29279265-29294056 Sample_02_0474 Fibroblast umbilical cord Fibroblast 789 3 347 13 3 75 105 RBMS3,RBMS3-AS3
SE_02_142800387 chr3:29279331-29348175 Sample_02_1428 Shoulder fibroblast_316 387 15 1817 43 9 228 105 RBMS3,RBMS3-AS3
SE_02_145200492 chr3:29279421-29287974 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 492 2 193 8 2 56 105 RBMS3,RBMS3-AS3
SE_02_113300429 chr3:29279458-29287643 Sample_02_1133 Liver Hepatic stellate cells 429 1 184 7 2 56 105 RBMS3,RBMS3-AS3
SE_02_150300979 chr3:29279493-29291102 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 979 4 259 9 2 69 105 RBMS3,RBMS3-AS3
SE_02_135600924 chr3:29279550-29294087 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 924 2 339 11 3 75 105 RBMS3,RBMS3-AS3
SE_02_130800801 chr3:29279596-29287280 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 801 3 170 7 1 56 105 RBMS3,RBMS3-AS3
SE_02_143600884 chr3:29279608-29290754 Sample_02_1436 Liver LSEC-Ctrl 884 3 246 9 2 69 105 RBMS3,RBMS3-AS3
SE_02_145500367 chr3:29279616-29287869 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 367 2 181 7 2 56 105 RBMS3,RBMS3-AS3
SE_02_137800837 chr3:29279636-29290073 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 837 4 233 8 2 68 105 RBMS3,RBMS3-AS3
SE_02_151500279 chr3:29279653-29294017 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 279 5 335 11 3 75 105 RBMS3,RBMS3-AS3
SE_02_152100683 chr3:29279679-29293914 Sample_02_1521 Skin A375 DMSO 683 2 333 10 2 75 105 RBMS3,RBMS3-AS3
SE_02_156600273 chr3:29279680-29348124 Sample_02_1566 Dermal Dermal fibroblast 273 12 1807 41 9 228 105 RBMS3,RBMS3-AS3
SE_02_126301609 chr3:29279682-29287917 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1609 1 184 7 2 56 105 RBMS3,RBMS3-AS3
SE_02_149700532 chr3:29279685-29290897 Sample_02_1497 Brain SHEP-21N 532 3 249 9 2 69 105 RBMS3,RBMS3-AS3
SE_02_060600713 chr3:29279692-29287960 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 713 2 183 7 2 56 105 RBMS3,RBMS3-AS3
SE_02_145400549 chr3:29279702-29287782 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 549 2 179 7 2 56 105 RBMS3,RBMS3-AS3
SE_02_150201013 chr3:29279733-29289475 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 1013 3 221 8 2 68 105 RBMS3,RBMS3-AS3
SE_02_055700568 chr3:29279774-29293893 Sample_02_0557 iPSCs WT hiPSC#1 568 6 331 10 2 75 105 RBMS3,RBMS3-AS3
SE_02_126701002 chr3:29279790-29287437 Sample_02_1267 Bone Im-GCT-4072_G34W 1002 2 173 7 1 56 105 RBMS3,RBMS3-AS3
SE_02_130900764 chr3:29279794-29286285 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 764 2 147 7 1 46 105 RBMS3,RBMS3-AS3
SE_02_113901151 chr3:29279796-29289385 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1151 2 218 8 2 68 105 RBMS3,RBMS3-AS3
SE_02_150100807 chr3:29279812-29290624 Sample_02_1501 Brain SHEP-21N_NOSPIKE 807 5 239 9 2 68 105 RBMS3,RBMS3-AS3
SE_02_149900125 chr3:29279818-29356325 Sample_02_1499 Brain BE_2_-C 125 29 2045 52 9 233 105 RBMS3,RBMS3-AS3
SE_02_128001089 chr3:29279819-29289468 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 1089 3 219 8 2 67 105 RBMS3,RBMS3-AS3
SE_02_060500265 chr3:29279828-29347528 Sample_02_0605 Skin Skin Fibroblast_DMSO 265 13 1786 40 9 226 105 RBMS3,RBMS3-AS3
SE_02_111000621 chr3:29279917-29289192 Sample_02_1110 Other HGrC1 621 4 208 7 2 67 105 RBMS3,RBMS3-AS3
SE_02_064801407 chr3:29280111-29286847 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1407 2 154 7 1 37 105 RBMS3,RBMS3-AS3
SE_02_126400950 chr3:29280127-29292132 Sample_02_1264 Bone Im-GCT-4072_G34W KO 950 5 268 10 2 63 105 RBMS3,RBMS3-AS3
SE_02_151600133 chr3:29280138-29294162 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 133 6 327 11 3 64 105 RBMS3,RBMS3-AS3
SE_02_045100947 chr3:29280209-29287864 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 947 1 166 7 2 44 105 RBMS3,RBMS3-AS3
SE_02_083900522 chr3:29280258-29290848 Sample_02_0839 Embryo hNPCs_K755R/+ 522 4 232 9 2 56 105 RBMS3,RBMS3-AS3
SE_02_060200450 chr3:29280317-29292830 Sample_02_0602 Mammary gland MCF10A_p63shRNA_DMSO 450 3 282 9 2 61 105 RBMS3,RBMS3-AS3
SE_02_105800257 chr3:29280336-29349084 Sample_02_1058 Bone A673_SA2 Rescue 257 15 1815 40 9 217 105 RBMS3,RBMS3-AS3
SE_02_064901165 chr3:29280339-29286886 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 1165 4 145 6 1 34 105 RBMS3,RBMS3-AS3
SE_02_065000823 chr3:29280346-29286743 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 823 2 145 6 1 34 105 RBMS3,RBMS3-AS3
SE_02_064500780 chr3:29280385-29287212 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 780 2 148 6 1 42 105 RBMS3,RBMS3-AS3
SE_02_091501114 chr3:29280385-29301762 Sample_02_0915 Heart left ventricle_DCM_LV1371 1114 4 510 15 3 78 105 RBMS3,RBMS3-AS3
SE_02_115500292 chr3:29280393-29380761 Sample_02_1155 Lymphoma RL_R1446C_gRNA1_KDAC005 292 24 2877 60 10 237 105 RBMS3,RBMS3-AS3
SE_02_119900666 chr3:29280396-29288655 Sample_02_1199 Brain GBM35 666 3 179 6 2 52 105 RBMS3,RBMS3-AS3
SE_02_060300700 chr3:29280399-29292654 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 700 4 272 9 2 61 105 RBMS3,RBMS3-AS3
SE_02_064600619 chr3:29280441-29286528 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 619 3 138 6 1 33 105 RBMS3,RBMS3-AS3
SE_02_091801048 chr3:29280442-29291306 Sample_02_0918 Heart left ventricle_DCM_LV1437 1048 4 240 9 2 56 105 RBMS3,RBMS3-AS3
SE_02_066100651 chr3:29280449-29292348 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 651 4 266 9 2 60 105 RBMS3,RBMS3-AS3
SE_02_092001172 chr3:29280453-29291924 Sample_02_0920 Heart left ventricle_DCM_LV1535 1172 5 254 9 2 60 105 RBMS3,RBMS3-AS3
SE_02_064400730 chr3:29280916-29286337 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 730 2 117 4 0 28 105 RBMS3,RBMS3-AS3
Genomic distribution of SEs associated with RBMS3-AS3
Genome Browser

The strength of the tissue affected by the gene

Expression of RBMS3-AS3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)