SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000124209
Gene: RAB22A Gene type: protein_coding
Strand: + External links:
Genomic region: chr20:58309715-58367507 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104901725 chr20:58287190-58321316 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1725 17 987 75 5 86 423 RAB22A,PPP4R1L
SE_02_076201614 chr20:58293642-58311226 Sample_02_0762 Podocyte podocyte_CTL 1614 6 491 42 3 67 412 RAB22A,PPP4R1L
SE_02_064500530 chr20:58294198-58313765 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 530 4 541 50 3 70 423 RAB22A,PPP4R1L
SE_02_061500960 chr20:58294662-58311043 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 960 2 448 40 3 63 394 RAB22A,PPP4R1L
SE_02_047900990 chr20:58294914-58316573 Sample_02_0479 Head and neck SCC25 990 6 631 55 4 71 423 RAB22A,PPP4R1L
SE_02_082601834 chr20:58297857-58317319 Sample_02_0826 Stomach gastric tumor 1834 9 609 51 3 70 423 RAB22A,PPP4R1L
SE_02_147000429 chr20:58302397-58314704 Sample_02_1470 Umbilical Vein H441 429 3 353 34 2 51 423 RAB22A,PPP4R1L
SE_02_072100417 chr20:58303830-58322795 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 417 5 601 42 4 52 423 RAB22A,PPP4R1L
SE_01_002000381 chr20:58304851-58311606 Sample_01_0020 Blood B-cell 381 1 193 18 1 43 423 RAB22A,PPP4R1L
SE_02_070700358 chr20:58306027-58314251 Sample_02_0707 Pancreas BxPC3 WT 358 5 229 20 0 40 423 RAB22A,PPP4R1L
SE_02_071300836 chr20:58306034-58313560 Sample_02_0713 Pancreas BxPC3_sgTP63 836 4 195 18 0 40 423 RAB22A,PPP4R1L
SE_02_071500470 chr20:58306042-58313836 Sample_02_0715 Pancreas SUIT2_TP63dN 470 4 207 20 0 40 423 RAB22A,PPP4R1L
SE_02_136600141 chr20:58306132-58313935 Sample_02_1366 Pancreas BxPC3-untreated 141 4 206 20 0 40 423 RAB22A,PPP4R1L
SE_02_071200444 chr20:58306144-58314432 Sample_02_0712 Pancreas BxPC3_sgNEG 444 3 229 20 0 40 423 RAB22A,PPP4R1L
SE_02_071900447 chr20:58306205-58313434 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 447 5 186 18 0 40 423 RAB22A,PPP4R1L
SE_02_135400306 chr20:58306252-58311095 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 306 1 124 12 0 36 400 RAB22A,PPP4R1L
SE_02_064600254 chr20:58306308-58313913 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 254 3 201 20 0 40 423 RAB22A,PPP4R1L
SE_02_064701052 chr20:58306308-58314599 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1052 5 227 20 0 40 423 RAB22A,PPP4R1L
SE_02_064400422 chr20:58306373-58313713 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 422 4 194 20 0 40 423 RAB22A,PPP4R1L
SE_02_065700480 chr20:58306388-58313662 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 480 3 191 19 0 40 423 RAB22A,PPP4R1L
SE_02_064901030 chr20:58306415-58313730 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 1030 4 194 20 0 40 423 RAB22A,PPP4R1L
SE_02_064801487 chr20:58306459-58313867 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1487 4 196 19 0 40 423 RAB22A,PPP4R1L
SE_02_135200575 chr20:58306480-58310681 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 575 1 105 9 0 32 377 RAB22A,PPP4R1L
SE_02_065000459 chr20:58306516-58313944 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 459 4 193 18 0 40 423 RAB22A,PPP4R1L
SE_02_135100697 chr20:58306526-58310868 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 697 1 107 9 0 33 379 RAB22A,PPP4R1L
SE_02_065201321 chr20:58307246-58314185 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1321 3 192 16 0 40 423 RAB22A,PPP4R1L
SE_02_075200613 chr20:58312858-58334667 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 613 3 672 33 3 4 0 RAB22A,PPP4R1L
SE_02_042000363 chr20:58321737-58349732 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 363 6 784 35 1 23 44 RAB22A,VAPB,PPP4R1L
SE_02_003801105 chr20:58326541-58334161 Sample_02_0038 Embryo DE 1105 3 218 14 1 0 0 RAB22A,PPP4R1L
Genomic distribution of SEs associated with RAB22A
Genome Browser

The strength of the tissue affected by the gene

Expression of RAB22A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)