SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_071200444
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Pancreas
Biosample name: BxPC3_sgNEG
Genomic region: chr20:58306144-58314432
Size: 8288
Super-enhancer rank 444
Number of SE elements: 3
ChIP density(Case|Control): 23603.3952|1649.312
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RAB22A ;
ROSE Overlap RAB22A ; PPP4R1L ;
ROSE Proximal ;
ROSE Closest RAB22A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA VAPB ; ANKRD60 ; PPP4R1L ; RAB22A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_071200444 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers