SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000065485
Gene: PDIA5 Gene type: protein_coding
Strand: + External links:
Genomic region: chr3:123067025-123225227 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_030400305 chr3:123030670-123105846 Sample_02_0304 Neuroblastoma N206 305 7 2126 98 3 275 379 PDIA5,SEMA5B
SE_02_031400548 chr3:123035954-123086860 Sample_02_0314 Neuroblastoma SK-N-FI 548 7 1444 70 2 205 137 PDIA5,SEMA5B
SE_02_031200381 chr3:123041296-123122253 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 381 9 2252 135 4 308 643 PDIA5,SEMA5B
SE_02_147900372 chr3:123042038-123091268 Sample_02_1479 Bone EW-7 372 20 1366 65 2 197 235 PDIA5,SEMA5B
SE_02_110900149 chr3:123045202-123158710 Sample_02_1109 Brain SK-N-FI 149 41 3193 206 7 420 1217 PDIA5,SEMA5B,MIR7110,SEC22A
SE_02_110500425 chr3:123045595-123158770 Sample_02_1105 Brain NBL-S 425 47 3187 206 7 412 1217 PDIA5,SEMA5B,MIR7110,SEC22A
SE_02_132000540 chr3:123045903-123091261 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 540 22 1265 61 2 173 235 PDIA5,SEMA5B
SE_02_132100654 chr3:123050726-123105321 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 654 15 1507 78 3 172 379 PDIA5,SEMA5B
SE_02_025200072 chr3:123054776-123127169 Sample_02_0252 Neuroblastoma IMR5-75-shMYCN-MYCN_high 72 9 1957 129 4 258 764 PDIA5,SEMA5B
SE_01_004400583 chr3:123057629-123087413 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 583 3 783 46 2 99 137 PDIA5,SEMA5B
SE_02_104600524 chr3:123061208-123169943 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 524 33 3057 206 7 348 1406 MIR7110,PDIA5,SEMA5B,SEC22A
SE_02_029700187 chr3:123065870-123159840 Sample_02_0297 Neuroblastoma CLB-CAR 187 16 2560 178 7 330 1217 PDIA5,SEMA5B,SEC22A
SE_02_017700656 chr3:123065925-123085594 Sample_02_0177 Urinary bladder J82 656 3 459 28 2 74 137 PDIA5,SEMA5B
SE_02_108300382 chr3:123066099-123123897 Sample_02_1083 Macula macula 382 14 1496 99 4 201 645 PDIA5,SEMA5B,MIR7110
SE_02_032600458 chr3:123066269-123105493 Sample_02_0326 Liver hepatocytes_d3 458 9 1015 54 3 127 379 PDIA5,SEMA5B
SE_02_032500676 chr3:123066314-123105226 Sample_02_0325 Liver hepatocytes_d1 676 8 1008 54 3 127 379 PDIA5,SEMA5B
SE_02_032700656 chr3:123066337-123105678 Sample_02_0327 Liver hepatocytes_d6 656 9 1022 54 3 127 379 PDIA5,SEMA5B
SE_01_008200939 chr3:123066418-123105334 Sample_01_0082 Right lobe of liver right-lobe-of-liver 939 10 1008 54 3 127 379 PDIA5,SEMA5B
SE_00_004100894 chr3:123066487-123091693 Sample_00_0041 Stomach stomach_3y 894 9 608 31 2 88 235 PDIA5,SEMA5B
SE_02_019400262 chr3:123066489-123098882 Sample_02_0194 Kidney Patient_x750T 262 5 805 40 3 99 316 PDIA5,SEMA5B
SE_00_004200694 chr3:123066492-123091434 Sample_00_0042 Stomach stomach_30y 694 11 600 31 2 88 235 PDIA5,SEMA5B
SE_02_120100205 chr3:123066874-123111109 Sample_02_1201 Brain GBM37 205 14 1127 64 3 143 535 PDIA5,SEMA5B
SE_02_075201261 chr3:123067044-123100622 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1261 6 852 41 3 103 266 PDIA5,SEMA5B
SE_02_075500757 chr3:123067052-123104679 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 757 9 973 50 3 122 328 PDIA5,SEMA5B
SE_02_106000656 chr3:123067156-123087531 Sample_02_1060 Bone TC71_SA2 KO 656 6 475 27 2 71 56 PDIA5,SEMA5B
SE_02_069100040 chr3:123068597-123125310 Sample_02_0691 Lung NCI-H524_no infection 40 38 1473 101 4 196 627 PDIA5,SEMA5B,MIR7110
SE_02_069400096 chr3:123068611-123112290 Sample_02_0694 Lung NCI-H82_no infection 96 21 1112 64 3 133 417 PDIA5,SEMA5B,MIR7110
SE_02_027900141 chr3:123068686-123087005 Sample_02_0279 Retina RB 141 6 427 26 2 61 0 PDIA5,SEMA5B
SE_02_104301423 chr3:123069803-123112310 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1423 17 1082 61 2 127 417 PDIA5,SEMA5B,MIR7110
SE_00_002900345 chr3:123070542-123097943 Sample_00_0029 Ovary ovary 345 16 677 34 2 78 179 PDIA5,SEMA5B
SE_02_053300989 chr3:123070560-123104979 Sample_02_0533 Blood vessel Circle of Willis_54y 989 17 893 47 2 106 242 PDIA5,SEMA5B
SE_00_005100532 chr3:123070563-123105321 Sample_00_0051 Adrenal gland adrenal gland 30y 532 24 902 48 2 106 242 PDIA5,SEMA5B
SE_02_053400774 chr3:123071428-123097550 Sample_02_0534 Blood vessel Circle of Willis_60y 774 17 647 33 2 73 179 PDIA5,SEMA5B
SE_02_021100963 chr3:123076449-123105422 Sample_02_0211 Lung MRC-5_NFD_1DPT 963 6 786 40 1 84 242 PDIA5,SEMA5B
SE_02_128800024 chr3:123076537-123126867 Sample_02_1288 Lung NCI-H524_p8-15 24 30 1340 96 2 175 627 PDIA5,SEMA5B,MIR7110
SE_02_007200026 chr3:123081496-123112670 Sample_02_0072 Lung NCI-H82_DMSO 26 6 829 44 1 87 417 PDIA5
SE_02_093100443 chr3:123081689-123094995 Sample_02_0931 Embryo H9 UTXKO 443 3 344 13 0 31 179 PDIA5
SE_02_093200451 chr3:123082507-123111077 Sample_02_0932 Embryo H9 WT_1 451 7 764 43 1 76 397 PDIA5
SE_02_093300346 chr3:123082649-123092397 Sample_02_0933 Embryo H7 UTXKO 346 2 250 11 0 19 134 PDIA5
SE_02_068701220 chr3:123082796-123099955 Sample_02_0687 Lung NCI-H146_no infection 1220 5 452 20 1 35 179 PDIA5
SE_02_093400678 chr3:123083059-123092584 Sample_02_0934 Embryo H7-WT 678 5 242 11 0 19 172 PDIA5
SE_00_001000737 chr3:123083162-123100412 Sample_00_0010 Embryo endodermal-cell 737 4 457 20 1 33 179 PDIA5
SE_01_002100157 chr3:123083195-123142472 Sample_01_0021 Skin bipolar-neuron 157 8 1593 121 3 183 739 PDIA5
SE_00_005300943 chr3:123096130-123105393 Sample_00_0053 Embryo trophoblast cell originated from H1 943 5 287 16 0 32 63 PDIA5
SE_02_017600874 chr3:123104938-123117080 Sample_02_0176 Peripheral blood LOUCY 874 2 324 29 0 35 264 PDIA5
SE_02_093200251 chr3:123124986-123157153 Sample_02_0932 Embryo H9 WT_1 251 9 957 69 3 101 453 PDIA5,MIR7110,SEC22A
SE_02_148500735 chr3:123136433-123158903 Sample_02_1485 Bone SK-ES-1 735 11 673 40 2 81 341 PDIA5,MIR7110,SEC22A
SE_02_031500493 chr3:123137024-123157152 Sample_02_0315 Neuroblastoma TR14 493 3 624 34 2 67 341 PDIA5,SEC22A
SE_01_006400096 chr3:123137024-123176300 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 96 6 1167 70 2 126 530 PDIA5,SEC22A
SE_02_148000622 chr3:123137128-123158161 Sample_02_1480 Bone MHH-ES-1 622 12 638 37 2 80 341 PDIA5,MIR7110,SEC22A
SE_02_148300510 chr3:123137258-123157616 Sample_02_1483 Bone RD-ES 510 15 622 35 2 70 341 PDIA5,MIR7110,SEC22A
SE_02_148600097 chr3:123137818-123159867 Sample_02_1486 Bone SK-N-MC 97 10 680 41 2 82 341 PDIA5,MIR7110,SEC22A,SEMA5B
SE_02_148200580 chr3:123138244-123173881 Sample_02_1482 Bone POE 580 11 1088 67 2 92 530 MIR7110,PDIA5,SEC22A
SE_02_147800167 chr3:123138705-123174636 Sample_02_1478 Bone EW-3 167 9 1092 68 2 91 530 MIR7110,PDIA5,SEC22A
SE_02_132001514 chr3:123142689-123159569 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1514 7 530 34 2 71 341 PDIA5,MIR7110,SEC22A
SE_02_070100389 chr3:123147624-123159698 Sample_02_0701 Bone David_TC32 389 7 361 21 0 62 182 PDIA5,MIR7110,SEC22A
SE_02_093400650 chr3:123150367-123156403 Sample_02_0934 Embryo H7-WT 650 3 187 10 0 27 119 PDIA5,MIR7110,SEC22A
Genomic distribution of SEs associated with PDIA5
Genome Browser

The strength of the tissue affected by the gene

Expression of PDIA5

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)